Os08g0558800

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Revision as of 13:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0558800| Description = Similar to 60S ribosomal protein L10a-3| Version = NM_001188771.1 GI:297726672 GeneID:9266191| Length = 2274 bp| De...")
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Gene Name

Os08g0558800

Description

Similar to 60S ribosomal protein L10a-3

Version

NM_001188771.1 GI:297726672 GeneID:9266191

Length

2274 bp

Definition

Oryza sativa Japonica Group Os08g0558800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28051209..28053482

Sequence Coding Region

28052321..28052416,28052854..28053054,28053214..28053267

Expression

GEO Profiles:Os08g0558800

Genome Context

<gbrowseImage1> name=NC_008401:28051209..28053482 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28051209..28053482 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gaagcttgccaagaagtaccatgctttcttagcatcagaggccatcatcaagcagattcctcgtctccttggtcctggtctcaacaaggcaggcaattccctacattggttactcaccaggagtctcttgaatccaaggtcaacgagacgaaagctacagtcaagttccagctgaagaaggttctgtgcatgggtgttgctgtgggtaacttgtcaatggaggagaagcagatccagcaaaacatccaaatgagcgtcaacttcctcgtgtcccttttgaaaaagaactggcagaatgtgaggtgcctttacatcaagagcaccatggggaaaccaatcagggtgttctaa</cdnaseq>

Protein Sequence

<aaseq>EACQEVPCFLSIRGHHQADSSSPWSWSQQGRQFPTLVTHQESLE SKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRC LYIKSTMGKPIRVF</aaseq>

Gene Sequence

<dnaseqindica>1113..1208#1646..1846#2006..2059#tcgccgccttctctcctctcgcgccgtttcgctccctgaccctccgccgccgccgccgccgatcatcatgaggtgattcccgccgcccaatctctacttcccttcttacggttaacgaatctcttctattgcttagtttctgtcgctatggccttctgtgattctgcgcgcttgctttgttagatcaaagctcttattaagatgtaagaagatgatatggaattcggacgatttgtttagtttatgtctcattaaagcgatggatctcgagatagactgggatcacgtagctgtacaccttgcatgatctagagttttctgcttctcgctagagatcagtggcgctagctagattatgtctgaatataggttactgatcggtataagaaatgctcgttctttgtttcctgaacaaaattcacgtgctgagcttgcgtgatcaattgcagtaagttgcagagcgaggttctcaaggaagccatctcccaggttgttggggaatccaaggagaagggcaggaagttcaccgagaccgttgagcttcagattggtctcaagaactatgacccgcaaaaggacaagcgtttcagcggctccgtcaagctgccccatatcccccgccccaagatgaaggtctgcatgcttggtgatgcccagcatgtcgaggaggtaagattatgatgccatacccattttgattttgtaaatttgtacaccctccgtttagattgaaattgaggattttcctttctcactcatgtaagtgaccttagattatttaagtctttgttttacattcttgtagtatcttaactgaaacatatttcatatttttaatttgtttggttgaattattatttgtgccttgcctgatatattgtctgggtccttctccattgcatctcaagtgttgtatgctatgtataattggctggagtctgaaattaagaatgttcacacgttgtttgtggatcaatttattctgtctaatgagaatttatttatctgccaacttgctgcggattggctcgtgtgcaggctgagaagattgggcttgactacatggatgttgaggctcttaagaaaatgaacaagaacaagaagctggttaagaagcttgccaagaagtaccatgctttcttagcatcagaggccatcatcaagcagattcctcgtctccttggtcctggtctcaacaaggcaggcaagtattccattttctgacattcttgctttttcttggtgtagttctgaattttaacgagtgcatgctagtttttcttggtgtagttttgaattctaatgagtacatgctagtttttcttggtgtagttatgaattctaacgtgcacagtattgtttcatatgcctcactgctacctgaatagtactacaaatttatagttgacctgcagtgaaacataactatcatctaggtgttacattgtatttcatttttcatggcgttgtctttttatgctaatttcatgccaactgttaactgttgtaggacctaaactgtccaattggaccttaatctagtaactgtgtgaagtttacccatatgtttttttagactctggctagttggggtttaccaaggcagattggttaattgaatcattttgatcacactgcaggcaagttccctacattggttactcaccaggagtctcttgaatccaaggtcaacgagacgaaagctacagtcaagttccagctgaagaaggttctgtgcatgggtgttgctgtgggtaacttgtcaatggaggagaagcagatccagcaaaacatccaaatgagcgtcaacttcctcgtgtcccttttgaaaaagaactggcagaatgtgagttatctgttctgagcctgtttgcatgcaattaaacttacagctcaaatctgtttaacaacatagtgaatatatatgagttttggccttgctttgaataatagttttatgtgagaaaacaactgatgataacttggaattgtttgtgtttgataggtgaggtgcctttacatcaagagcaccatggggaaaccaatcagggtgttctaagttggtgtgttccacctagaagtgaaaaggatcagttgaaaccaagcttttcctcttaaaatagacctgtcgctctgggaccggcttttgtctgtcagtgcaagagaatatatcaaagaaatatctggaccttatttttgtagcgtgtttatttgggagtaacttattctacgtaagcttctaatgtggaaattctatgtgtgttatgctgctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0558800, RefSeq:Os08g0558800