Os08g0563300

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Revision as of 13:13, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0563300| Description = Similar to Bet1-like SNARE 1-1 (AtBET11) (Bet1/Sft1-like SNARE 14a) (AtBS14a)| Version = NM_001069060.1 GI:115477858 ...")
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Gene Name

Os08g0563300

Description

Similar to Bet1-like SNARE 1-1 (AtBET11) (Bet1/Sft1-like SNARE 14a) (AtBS14a)

Version

NM_001069060.1 GI:115477858 GeneID:4346340

Length

2899 bp

Definition

Oryza sativa Japonica Group Os08g0563300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28296783..28299681

Sequence Coding Region

28296976..28297065,28297160..28297219,28297287..28297343,28298773..28298917,28299565..28299578

Expression

GEO Profiles:Os08g0563300

Genome Context

<gbrowseImage1> name=NC_008401:28296783..28299681 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28296783..28299681 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaactctaggagggacttccgcagccacagagctgctttatttgatggtattgaggagggtgcgatcagaagttcagcttactcttctcaaattcatgagcatgagaatgaccaagctatggacagtctgcatgacagggtcagcgttctcaaaagattgacaggagatatacatgaagaagtggagaatcataaccgaatgctggacagaatgggtaatgatatggatgcttccagaggatttctatctggaacggtggacaagtttaagatggtttttgagaccaaagcaagtcgcagaatggctaccatggtggcttctttcatttctgtcttcttccttatatactacctaaccaagtag</cdnaseq>

Protein Sequence

<aaseq>MNSRRDFRSHRAALFDGIEEGAIRSSAYSSQIHEHENDQAMDSL HDRVSVLKRLTGDIHEEVENHNRMLDRMGNDMDASRGFLSGTVDKFKMVFETKASRRM ATMVASFISVFFLIYYLTK</aaseq>

Gene Sequence

<dnaseqindica>2617..2706#2463..2522#2339..2395#765..909#104..117#atcgtctccgtcgtcggcgcagatctccggctcctccatccatcagtctctctctctcgctttccatccccttcttcgttggccgggactcttccttccccccatgaactctaggaggtcagtctcccagatcccctacctcttcagtctattcatttctcttgtatttgttttgttgatttactcactcactgacttgattagtcagttcattcatgaattgggcatcgactatatactactagtagatccagcagatgtaaagccttgcccccctttttcactggggcgggctgccgtcagatgcagttgcggctcttcttcttctctttttctgtcacttgttaataatcctaccatctagcccacctgcttcttaattgacattccgtcccatcttagcccctgcctcttgcatatatgcattttgtccatttcgttcatcatgcttatccccttatccaatcttaccgtaccgtatgatgcctctttagtctttactgattttccacaaattaaaataccccctttttcatttaacatgtcatgattcataaaaaaaattataatataatctcatggaaacttacgaaaatacaacacatatgaaaataataataattaaactgtttgtttctactctgctacttttcaatcactggaagtaatttttctcagctaacggaagtgacgcatactagacagtactaaagttgtccagaacacggtagtaatgccttttatattcatttggccgtttgcagggacttccgcagccacagagctgctttatttgatggtattgaggagggtgcgatcagaagttcagcttactcttctcaaattcatgagcatgagaatgaccaagctatggacagtctgcatgacagggtcagcgttctcaaaagagtacgtatgatgtatttcttttctctccaaagtttacttgctgaattgagctatgtgcaacacaatcctggaaaggttttcaaaacctcaattacacaaacccccgtactactgcaaagggctaaattgttccgtctgataagatcattgagtatacaacaatgcttggagcattttttaagttaatgtttgggttagatcgtgttgtaccataataccaaagacggaatttctgagctaccaaaagagtatgacagggtcagtgttctcaaaaaaagtacatatgacgcacttcatttctctgcaaagtttgcttcacatattgagttatgtgcaatacaaacctagaaaggtttttactacctcattaacacaaaaccctgtgctactgcaaagggctaaatggttcagtctgattggatcgcattgtgtgcgataatggttgagccgttacaataaggttagggttagattttttttgagaagtgcaaaaagataatgaaacactggtgcctattctcgctatacaaattggcacgacctagagcaaccacggtttagatggccagctccggtaacaccggctttgcaggttggggttagatcgttttgcactatataataccaaggatggagtttttatcgagctggtagaaataaaacggcttaatttggaattatttactgatggcccatgacttgttttcgtgctaactgcagaaggtgactacttatagctttgtacagtaacacggcaagagttgggcactttcttgtgtatttgctagtataaatttccagattgtctgacatatttttctagggagaaatgaccccaattttttccatcgaagaaaaatataaggacggtctgaacatctgaatgtgagatcaacacattcgagaatccaaaatagcattatagaaacagctagaaaagaggaataaagacatatcattcaaggataaattattccactgttccagcctccaggaggtcccgacgcatcgttaatagtccttagctcactgcaaatattttgttgtgaggaacatggcgcaaagttcactgcaaaatttaccatatgttattttccttagtctatgattcactccttatgtaattaagtcgccccttccctcctctttctctctcgacggactatgatccattgttaataactttttatctttatttttctcctcctaatataaccggcagtcctcctgccatataccatttcaaaaaattagtatgatggttattgcatgtggatgatctgaatatcaaaagtaaacagcgctgcatcttttagcttttgtatgttattgttctcaagattttgcatgctagatcacaatgtaatcttcatatgtgcttatagccattctaaacttactgtacctttgatgtggtttgtctcttcagttgacaggagatatacatgaagaagtggagaatcataaccgaatgctggacagaatggtactaatatcctgcaagatgctatctttcttgtcactactctctaatgcatttctttgctatttagggtaatgatatggatgcttccagaggatttctatctggaacggtggacaagtttaagatggtaatgaattaaggagttcctatctccacgtcatgggctactccttaactgttctgttattcttacaattgctcttttttttttcttacttcaggtttttgagaccaaagcaagtcgcagaatggctaccatggtggcttctttcatttctgtcttcttccttatatactacctaaccaagtagaagaattgtctgactctgcctttcattttcctcttgcttgcacgtaaagtacatggctgacggtgtttatcaagttttgtgcacttgatgaccgaacatttgagaattttatctcaaactgtgtggattgattgtaaggcgagctgaacgttttctgaatgtggtgagaactgttgtaaaactttgtgacggc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0563300, RefSeq:Os08g0563300