Os08g0567100

From RiceWiki
Revision as of 13:13, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0567100| Description = Epsin, N-terminal domain containing protein| Version = NM_001069081.1 GI:115477900 GeneID:4346362| Length = 1221 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0567100

Description

Epsin, N-terminal domain containing protein

Version

NM_001069081.1 GI:115477900 GeneID:4346362

Length

1221 bp

Definition

Oryza sativa Japonica Group Os08g0567100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28487653..28488873

Sequence Coding Region

28487811..28488692

Expression

GEO Profiles:Os08g0567100

Genome Context

<gbrowseImage1> name=NC_008401:28487653..28488873 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28487653..28488873 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgactactggaggatcgcgggcgtgctgaggcggaggatggcccgcgccggcgactggaaggagtggaggcccgtgtacaaggctctggtggtgctggagttcctgctcacccacgggcccgacgaggtcccacgagacttcctgccggacgttgccgccctgcgcgacctccgcggcttcacccacgtcgacgacaggggcttcgactggggtgcctgcatgcagaggcgctgtgacagcgtcctctcgctgctcaccgacgccgaacgcctccgcgacgcacgacgccgcatccgcgtctcccactctactcacgagctggtgcagcagcatggttccccttcctcctcctcggggtccccctcctctgcttcctcccggacctcctcgcagtcgcacgccagcagctggtccgtcgcctcctccgatagccccaccatggtctgccactgtgccgccgccgccgactaccgccacgacaagaagttcgacgcctacacggcggacgacgactggatgcagcacctgcaggttcacaacaccaccactacgctggagtacgacgacgaccacgaccacgaccacgactgcccgaatcatcctcctctcactacaccccgcagctgggacgcccacgacgaccacgactgcccgaatcatcctcctcacactacaccccgcagctgggacgcccacgtccacgacttgtccctgctgcagcggcgcggccgcccaggaacagatgccaccttctgctccaggatgcttggcgccgtcaacgtcagcagccgggcatccggcttccagagcttgtcgcagccggaacggaggtccgccagcaagaagctccagcgtcagctttccatggaatattga</cdnaseq>

Protein Sequence

<aaseq>MDDYWRIAGVLRRRMARAGDWKEWRPVYKALVVLEFLLTHGPDE VPRDFLPDVAALRDLRGFTHVDDRGFDWGACMQRRCDSVLSLLTDAERLRDARRRIRV SHSTHELVQQHGSPSSSSGSPSSASSRTSSQSHASSWSVASSDSPTMVCHCAAAADYR HDKKFDAYTADDDWMQHLQVHNTTTTLEYDDDHDHDHDCPNHPPLTTPRSWDAHDDHD CPNHPPHTTPRSWDAHVHDLSLLQRRGRPGTDATFCSRMLGAVNVSSRASGFQSLSQP ERRSASKKLQRQLSMEY</aaseq>

Gene Sequence

<dnaseqindica>159..1040#aggcgtcggggtttctgcaggacaaatacaagcaagcacggctggccctgggcgacgtgacgccggcggagctgctggtgcaggaggcgaccaacaacgacggcggagtgggccccgacgccaggaccctggccagcatagccgacgccgccttcgacatggacgactactggaggatcgcgggcgtgctgaggcggaggatggcccgcgccggcgactggaaggagtggaggcccgtgtacaaggctctggtggtgctggagttcctgctcacccacgggcccgacgaggtcccacgagacttcctgccggacgttgccgccctgcgcgacctccgcggcttcacccacgtcgacgacaggggcttcgactggggtgcctgcatgcagaggcgctgtgacagcgtcctctcgctgctcaccgacgccgaacgcctccgcgacgcacgacgccgcatccgcgtctcccactctactcacgagctggtgcagcagcatggttccccttcctcctcctcggggtccccctcctctgcttcctcccggacctcctcgcagtcgcacgccagcagctggtccgtcgcctcctccgatagccccaccatggtctgccactgtgccgccgccgccgactaccgccacgacaagaagttcgacgcctacacggcggacgacgactggatgcagcacctgcaggttcacaacaccaccactacgctggagtacgacgacgaccacgaccacgaccacgactgcccgaatcatcctcctctcactacaccccgcagctgggacgcccacgacgaccacgactgcccgaatcatcctcctcacactacaccccgcagctgggacgcccacgtccacgacttgtccctgctgcagcggcgcggccgcccaggaacagatgccaccttctgctccaggatgcttggcgccgtcaacgtcagcagccgggcatccggcttccagagcttgtcgcagccggaacggaggtccgccagcaagaagctccagcgtcagctttccatggaatattgatccccccccctccattaattctatcattccaacaacaatataattccgatccgagtttagtccagccagctagctgaattgcagagcttagcctaagccagctagctagtagcttctttgatttctttggtcccttgctacactcgactcaaatcaaatgttattgttacttgtttcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0567100, RefSeq:Os08g0567100