Os09g0135400

From RiceWiki
Revision as of 07:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0135400| Description = Octicosapeptide/Phox/Bem1p domain containing protein| Version = NM_001069173.1 GI:115478085 GeneID:4346468| Length =...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0135400

Description

Octicosapeptide/Phox/Bem1p domain containing protein

Version

NM_001069173.1 GI:115478085 GeneID:4346468

Length

2491 bp

Definition

Oryza sativa Japonica Group Os09g0135400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2632508..2634998

Sequence Coding Region

2633236..2634870

Expression

GEO Profiles:Os09g0135400

Genome Context

<gbrowseImage1> name=NC_008402:2632508..2634998 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:2632508..2634998 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaaaatttaatccgtcgccaccatcgcccaagttggtgcctttctccaactctccgccatcttctgccaacgcatcagctgctgagagctcccagaaggtcacgccgacacctctggttccctcttcactttcgttgaaagacaaagcgctgatggacaagaaggttgtcacaagatcaaggccgctcaagctggtgtacgatcatgatataaggcttgcgcagatgccagaaaaatgcagcttccgaacactccgtgaagttgtggcatcacgattcccatcgtccaaggctgtgctgattaagtataaggatgctgatggtgatctggttaccattacttgttccgcagaacttcgattggccgagtcctgtgttgatatagctggcagtgaggtgatagaagatggtgcacggcatggtcagaaacttccaatgttgagacttcacattgttgaagtaagcccagatcaggagcctccaatgccaacagaagaggagaagctggagcaggataatgagttgctggtgaaaggtgaagataactctccacatgcttcagcagctgtggtgactgatgcagaggtgacgaaacaagatgtggagaatgtagttgctgaagctgaacagaacaccctgacagggaagaaagattgtggccatgctgagtgcaaggaagctgaaattgatgattggcttcttcagttcgcagatttattccggaaccaggttggtgttgatgcagatgcacatctggacctgcatgaactgggaatggagctgtgctctgaggcgcttgaggaaacggttacaagtgaggaggcacaagccctctttgagatggctgcagctaaattccaagaggttgctgctttggccctattcaactggggaaatgtgcacatgtgtgccgcaaggaaacgcattcccctagatgaatcggctccaaagaaagtcatgtcagctcagctctgcacagcttatgattgggtgcgagataggtatgctcttgcagggagcaagtacgaggaggctcttaaaatcaagccggacttttatgaagggctacttgctttaggccagcaacattttgagactgcaaagcttcattggtcatttgcactagcagacaaggttgacctgtctgcttgggattcttcacagacattcaagctttttgacagtgctgagcacaagatgagggctgcaacagaaatgtgggagaaagtagaagagcaaagaatggcagaattaaaagaaccatctagcgaggcactgaagaaaaggaagaagcaacataatgcagatggtcaaggggagttgactccagaggaggcagctgagcaggcagcagtaatgaggcagcaaattcacctgttctggggtaatatgctttttgagcgttctcaagtggaattcaaacttgatatcgctgattggaagaagaatcttgatgcgtccattgaaaggtttaagttggctggagcgtcagaatcagatatctctgcagtcttgaagaaccatttttccaacacagtttctgagtgtgaagataagaaaatcatgactttagatacaggaatctcccaaataagtaacaatattgaggacaagtgtatccttgaaagctag</cdnaseq>

Protein Sequence

<aaseq>MSKFNPSPPSPKLVPFSNSPPSSANASAAESSQKVTPTPLVPSS LSLKDKALMDKKVVTRSRPLKLVYDHDIRLAQMPEKCSFRTLREVVASRFPSSKAVLI KYKDADGDLVTITCSAELRLAESCVDIAGSEVIEDGARHGQKLPMLRLHIVEVSPDQE PPMPTEEEKLEQDNELLVKGEDNSPHASAAVVTDAEVTKQDVENVVAEAEQNTLTGKK DCGHAECKEAEIDDWLLQFADLFRNQVGVDADAHLDLHELGMELCSEALEETVTSEEA QALFEMAAAKFQEVAALALFNWGNVHMCAARKRIPLDESAPKKVMSAQLCTAYDWVRD RYALAGSKYEEALKIKPDFYEGLLALGQQHFETAKLHWSFALADKVDLSAWDSSQTFK LFDSAEHKMRAATEMWEKVEEQRMAELKEPSSEALKKRKKQHNADGQGELTPEEAAEQ AAVMRQQIHLFWGNMLFERSQVEFKLDIADWKKNLDASIERFKLAGASESDISAVLKN HFSNTVSECEDKKIMTLDTGISQISNNIEDKCILES</aaseq>

Gene Sequence

<dnaseqindica>729..2363#tgggcaaatccggcgcaaaaaagaagaaacccgccgccgccgcctccgcctccgccgccgccaccaaatcatctcccgccgcaacagagccgaaggcaccgacgcagtcccagccccccgcggccaacggggcggcgccgcatctggtggaccccgccgtgctcctgcgccgcgcgcacgagctcaaggaggaaggcaaccgcctgttccagtcccgcgactacggcggcgcgctgcggcagtacgagctcgctctccgcctcgccccgcgcggccaccccgaccgcgccgtcttccacagcaaccgcgccgcctgcctcctccagctccgccccgtcgaccacaaggccgtcgccgaggagtgctccctcgctctccaggcggagccgctcttcccgcgcgcgctccttcgccgcgcccgcgcgctcgaggcgctcggtcgccacgagctcgcgcttaccgacgcccttgccctcctcgctctcgaccccgaccaccaggacgccgtcgacctcgtccaccgcctccgctcccgcattctatccccgtcctcctcagcctcaggctctgccacctccacccccgaaccaactagccgcccctcccctgctgctcttggtgcctccgctgttgttgccggcctaggcccgtccctccccgctcgccctttccccaagaaaccatcacctcctcctccgcctgctcaacaacagcaatcggttcctccaatgtcaaaatttaatccgtcgccaccatcgcccaagttggtgcctttctccaactctccgccatcttctgccaacgcatcagctgctgagagctcccagaaggtcacgccgacacctctggttccctcttcactttcgttgaaagacaaagcgctgatggacaagaaggttgtcacaagatcaaggccgctcaagctggtgtacgatcatgatataaggcttgcgcagatgccagaaaaatgcagcttccgaacactccgtgaagttgtggcatcacgattcccatcgtccaaggctgtgctgattaagtataaggatgctgatggtgatctggttaccattacttgttccgcagaacttcgattggccgagtcctgtgttgatatagctggcagtgaggtgatagaagatggtgcacggcatggtcagaaacttccaatgttgagacttcacattgttgaagtaagcccagatcaggagcctccaatgccaacagaagaggagaagctggagcaggataatgagttgctggtgaaaggtgaagataactctccacatgcttcagcagctgtggtgactgatgcagaggtgacgaaacaagatgtggagaatgtagttgctgaagctgaacagaacaccctgacagggaagaaagattgtggccatgctgagtgcaaggaagctgaaattgatgattggcttcttcagttcgcagatttattccggaaccaggttggtgttgatgcagatgcacatctggacctgcatgaactgggaatggagctgtgctctgaggcgcttgaggaaacggttacaagtgaggaggcacaagccctctttgagatggctgcagctaaattccaagaggttgctgctttggccctattcaactggggaaatgtgcacatgtgtgccgcaaggaaacgcattcccctagatgaatcggctccaaagaaagtcatgtcagctcagctctgcacagcttatgattgggtgcgagataggtatgctcttgcagggagcaagtacgaggaggctcttaaaatcaagccggacttttatgaagggctacttgctttaggccagcaacattttgagactgcaaagcttcattggtcatttgcactagcagacaaggttgacctgtctgcttgggattcttcacagacattcaagctttttgacagtgctgagcacaagatgagggctgcaacagaaatgtgggagaaagtagaagagcaaagaatggcagaattaaaagaaccatctagcgaggcactgaagaaaaggaagaagcaacataatgcagatggtcaaggggagttgactccagaggaggcagctgagcaggcagcagtaatgaggcagcaaattcacctgttctggggtaatatgctttttgagcgttctcaagtggaattcaaacttgatatcgctgattggaagaagaatcttgatgcgtccattgaaaggtttaagttggctggagcgtcagaatcagatatctctgcagtcttgaagaaccatttttccaacacagtttctgagtgtgaagataagaaaatcatgactttagatacaggaatctcccaaataagtaacaatattgaggacaagtgtatccttgaaagctaggttttcatggttttaagttggataacatccatgcccatattcttatctgttcttgataatattttcctgatgttgttttatgacctcctaattagggattacagcacaatgaattttccgttacctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0135400, RefSeq:Os09g0135400