Os09g0135800

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Revision as of 07:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0135800| Description = Armadillo-like helical domain containing protein| Version = NM_001069176.1 GI:115478091 GeneID:4346471| Length = 413...")
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Gene Name

Os09g0135800

Description

Armadillo-like helical domain containing protein

Version

NM_001069176.1 GI:115478091 GeneID:4346471

Length

4131 bp

Definition

Oryza sativa Japonica Group Os09g0135800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2649928..2654058

Sequence Coding Region

2652173..2653924

Expression

GEO Profiles:Os09g0135800

Genome Context

<gbrowseImage1> name=NC_008402:2649928..2654058 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:2649928..2654058 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgccgctgccgcattccccgcccccaccggctgccgcggatgcgctcggccagatcttgcaggctctgctcccggcgctgctcttggctgcggagtccgtgaaggcgctccacgcccggtggcgcgcggtccacggcacgctgctcgcgctccagacctctctcgccgcagcaccggactcggccgtctcccaccctctcttcgccgacctggtggcctcgctcctcccggcgctccgctccctgcaagcgctgtccgcgcgctgccaggacccgtcactccctggcggccgcctccgcctccagagcgacctcgacatcgctgcctcctcgctctctctgctcctccacgacctctcgctgctccttcgctcggggatcctctacgtcgatccgtcggcttcgtcccccaacgccattgtgctgcaggtgcccgcgccagccgcgtcccgggcggacaagtctctcttcatccgggacgccttcgcgaggctccagatcggggggctcgatctcaagctcaaggcgctcgcctcgctactggacttgcttgccaacgacatcgccgcggagtccgcgcacatcgttgccaccgacggggatgtcgccgcgctgctccgcctgctcgacgcgtcgtcccactccgcgctacgggaccgtgcggcggctaccgtggcccacctcgccacggcctgcgtggcttcgcggaaggttgtgttcgacgagggcggccttggcccgctccttcgcgtgctcgactccggctcagcgccagccacgcgggaacgcgccgtggcggccattgaagccatcaccgcggacgtcggcagcgcgtgggctgttgcggcatacggaggggtacccatcttgattaatgcgtgccgacctggctccgggtcccctgtggtacaggctctcgctgtagcggcgctcaagaatgtggcttccatcgaggatgtgcgctcagcactggttgaagagggtggactgccaattcttgttgatctgcttgcaagcggcactattgacgcacagaagggttctgctctctgcatatggtctctagcatccttgggagaccatgagatacaataccagattgtccaagcaggtgcattgctgccactactgcaggcgctgcacactgcttctggcctagatctccatgacactgtcttacgcgctatccacgcactcgcagtggtccctgctgctgctagaactctctgctcatcgccgctcttcttcgcgcaacttacagacctcatgtgccgtggtggtagcatcttgctgcagcagatggccgctgatatggttgctgaacttgcacctggcgtgagcgacgacaccaagcggtgcatggcaccgtgcatttgcatgctggttaagatgatggagacagctaagccagctactgtacaggagtcagctggccgtgccttgcttgctttgatgaccttgaagtttaaccggaaggaattggtcagggatgagaagagtgtgactaggttattgcacatgcttgatccgaggaatgaagagattgataaaaagtatccagtctcagttgttctagctctagccttgggtggtgggaatgggacacggaggcggcttgcggattctggcatttgccagcatttacagaagttggctgaggctgaggtgcctggtgcaaagaaggctttgcagaggatttctggcaatcgactcaagagcttactctctagaggatggaacaactag</cdnaseq>

Protein Sequence

<aaseq>MPPPLPHSPPPPAAADALGQILQALLPALLLAAESVKALHARWR AVHGTLLALQTSLAAAPDSAVSHPLFADLVASLLPALRSLQALSARCQDPSLPGGRLR LQSDLDIAASSLSLLLHDLSLLLRSGILYVDPSASSPNAIVLQVPAPAASRADKSLFI RDAFARLQIGGLDLKLKALASLLDLLANDIAAESAHIVATDGDVAALLRLLDASSHSA LRDRAAATVAHLATACVASRKVVFDEGGLGPLLRVLDSGSAPATRERAVAAIEAITAD VGSAWAVAAYGGVPILINACRPGSGSPVVQALAVAALKNVASIEDVRSALVEEGGLPI LVDLLASGTIDAQKGSALCIWSLASLGDHEIQYQIVQAGALLPLLQALHTASGLDLHD TVLRAIHALAVVPAAARTLCSSPLFFAQLTDLMCRGGSILLQQMAADMVAELAPGVSD DTKRCMAPCICMLVKMMETAKPATVQESAGRALLALMTLKFNRKELVRDEKSVTRLLH MLDPRNEEIDKKYPVSVVLALALGGGNGTRRRLADSGICQHLQKLAEAEVPGAKKALQ RISGNRLKSLLSRGWNN</aaseq>

Gene Sequence

<dnaseqindica>135..1886#gtgtccgtccgttgtccaccccacggccccactgatcccctcccatgtgatgcgctgccgccgccgccgatcccccgctgctctttccctcgctttcccctcccctcctcccctcacgccactcgccgccgcccatgccgccgccgctgccgcattccccgcccccaccggctgccgcggatgcgctcggccagatcttgcaggctctgctcccggcgctgctcttggctgcggagtccgtgaaggcgctccacgcccggtggcgcgcggtccacggcacgctgctcgcgctccagacctctctcgccgcagcaccggactcggccgtctcccaccctctcttcgccgacctggtggcctcgctcctcccggcgctccgctccctgcaagcgctgtccgcgcgctgccaggacccgtcactccctggcggccgcctccgcctccagagcgacctcgacatcgctgcctcctcgctctctctgctcctccacgacctctcgctgctccttcgctcggggatcctctacgtcgatccgtcggcttcgtcccccaacgccattgtgctgcaggtgcccgcgccagccgcgtcccgggcggacaagtctctcttcatccgggacgccttcgcgaggctccagatcggggggctcgatctcaagctcaaggcgctcgcctcgctactggacttgcttgccaacgacatcgccgcggagtccgcgcacatcgttgccaccgacggggatgtcgccgcgctgctccgcctgctcgacgcgtcgtcccactccgcgctacgggaccgtgcggcggctaccgtggcccacctcgccacggcctgcgtggcttcgcggaaggttgtgttcgacgagggcggccttggcccgctccttcgcgtgctcgactccggctcagcgccagccacgcgggaacgcgccgtggcggccattgaagccatcaccgcggacgtcggcagcgcgtgggctgttgcggcatacggaggggtacccatcttgattaatgcgtgccgacctggctccgggtcccctgtggtacaggctctcgctgtagcggcgctcaagaatgtggcttccatcgaggatgtgcgctcagcactggttgaagagggtggactgccaattcttgttgatctgcttgcaagcggcactattgacgcacagaagggttctgctctctgcatatggtctctagcatccttgggagaccatgagatacaataccagattgtccaagcaggtgcattgctgccactactgcaggcgctgcacactgcttctggcctagatctccatgacactgtcttacgcgctatccacgcactcgcagtggtccctgctgctgctagaactctctgctcatcgccgctcttcttcgcgcaacttacagacctcatgtgccgtggtggtagcatcttgctgcagcagatggccgctgatatggttgctgaacttgcacctggcgtgagcgacgacaccaagcggtgcatggcaccgtgcatttgcatgctggttaagatgatggagacagctaagccagctactgtacaggagtcagctggccgtgccttgcttgctttgatgaccttgaagtttaaccggaaggaattggtcagggatgagaagagtgtgactaggttattgcacatgcttgatccgaggaatgaagagattgataaaaagtatccagtctcagttgttctagctctagccttgggtggtgggaatgggacacggaggcggcttgcggattctggcatttgccagcatttacagaagttggctgaggctgaggtgcctggtgcaaagaaggctttgcagaggatttctggcaatcgactcaagagcttactctctagaggatggaacaactagtcagtctgccatgttggggtaaatatagaactttctacatctctccttttgatcatgattatattgtatggttgtgaactttactaactactaccaattttgctcccaaggccagaaattttactccctctttaagaaggatgaatttcacatacaatttttttttccatactggaactacgcatattgccatgttccaagataggacttagtgactgttttagttgtttaaatcttgcaaaaatattatagcatagaggttatcctgttgtagtctgttttctgtcattcctttgctgtatgattgtccaggtttggtaggaataacatggacaggttatgggaggattgagccacaatgattagatgtatcttttcgatagtggtgtgctgttatgtactttgtagctatttctttttttgtactttcaaaatgcaaatgcttgctgagaaatatcatgtcataaactggtctgtggtggcaattcgtgtgattggtgggttgggtaggtgaatgatatggctggccattgagggatcgggccaattaatgcttatagccatagcaggacagtgtgccatgtagcatctggagtggaggatttgtatgtctttcgtatgccttagccttaagacagtagaaatgatcaagaaggcaaagcaaatactgcattgaagaaaccaggaaggagattagtgagaaggagagagtgaaaaataataaattagaaaatgtacaaggactcatcaagaatatatttggttttgcactcaacatgattgcttttccttcaatgtagtcacagggactaatacaaatctcttttattcttttttttattgctcacatcagaatctagttaaagtatgtcaatcgtgtaacattaaaaatttaatgcatatggtattgttgaactttgctaatgtaatttaacctagcatgtgaattgtatgtaagttcctataatacatatagataatgtagaaagctgaagcattccctgcatttgccgatgcgctaaaagttttgtacagcgtatttgtgccttgcatcttagcctttcccagtctgtccacagaagacatatcctacaaataacttatctatatacgtttgcctattgatttttagtcatcgtagcctccatccagtagttcactattaatgagacgtacttataatattattacatatctatagcatgcaaatttatgaactgtaccatgttgctcatttcaaatgctgatgtctattcaattggattctgatatatggtggtatatcacatgctctcaagcatacaaaacaacctgtttaaaataagcatagagaaaacttagcaatttgttagagtatactctggattcagactttttatgggcaaaattgtaactttttattggtacaacaggatgcatcagttcagttgacccgatttctacctgtctttggttccaattgcttcctccactaagctttactagaattcccattcacttgctgaatcattttcatttagtctgcaaacagaactctacaaagaaagacaagatcatgttttcttccggcccatgaatcttctacaaattactagtagtattatggtcagaagttactgaagtactggttccagcctaccatgccatttactgaagtactggttccagcctaccatgccattctcattattcctgcgttgcagttttttttcagcgggaattcctgcattgcagttgactgagtagttgagtctgttaagctctagcatagtgtacagattcgatgctgttgctgataacatgtataatttgcattgttttttcattacattcctagcgtttttgtagttcacttgagcgaactaattcttatgatcccgtctttttttttttcaatttgcagttgaagaaagcccaatgtggagtgcttataattatagaagaaccctcaagtatttaaattaggagtcgtcatcatacaagaccaccgagcaagagagcgaggagttctctgtttctctgcggcctaaaggtgggcagtagctggtatttgtagtatattgacaaaatagaagagcattggatgcagcattttaggaagtatccttgagcttctattttctttttgactattttccttctcttttctttgcctctcccttctcccgtgtaactgacttgtgaagttgctgcgtgtttgtgtgttgatttgaaatgaaggaaatgtttctcgtacgagattctc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0135800, RefSeq:Os09g0135800