Os09g0258700

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Revision as of 07:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0258700| Description = MtN3 and saliva related transmembrane protein family protein| Version = NM_001069237.1 GI:115478213 GeneID:4346541| ...")
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Gene Name

Os09g0258700

Description

MtN3 and saliva related transmembrane protein family protein

Version

NM_001069237.1 GI:115478213 GeneID:4346541

Length

6400 bp

Definition

Oryza sativa Japonica Group Os09g0258700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4966924..4973323

Sequence Coding Region

4966924..4967436,4969519..4969600,4970399..4970647,4971494..4971546,4972964..4973059
,4973189..4973323

Expression

GEO Profiles:Os09g0258700

Genome Context

<gbrowseImage1> name=NC_008402:4966924..4973323 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:4966924..4973323 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgtccccagacttgatccgcaacatggtgggcatagtcggtaacatcatctcctttggcctcttcctctcgccggtgcccaccttctaccggatcatcaagaataaggacgtgcaggacttcaaggcggacccgtacctggccacgctgctcaactgcatgctctgggttttctatggtctccctatcgtccaccccaacagcattcttgtcgtcaccatcaacggcattggccttgtcatcgaggctgtctaccttaccatcttcttcctcttctccgacaagaagaacaaaaagaagatgggagtggtgctcgctacagaggctctcttcatggcggcggtggtgctcggcgtgcttttgggcgcgcacacccatcagagacgctccttgatcgtcggcatcctctgcgtcatctttggcaccatcatgtactcctcaccactcaccatcatgagtcaggttgtgaagactaagagcgtggagtacatgccattgctgttgtcggtggaggcggagtcctacgagcggaaggtgccggagattcttccaagacaggcagtggaggggaaggggaggggggcggcgagagtcctgctcaactgtgacatactcctgctcaactgtgacatactaagccacttttgcttccattccatcagtgatcaatctgagataagcctccctgaaaatgaactccaggctctgctcctatcaattatgtttaatctttttgagattaccagtagatcactgagagaggagagtaatcacaattcgcaaaagcatcggtctgtgtcattagcaactcagcaaatgacagtggcaaacgcaaacgaggtacaaagtctaacatcaacaacaccagcactagcaaaggagcaccccctacaggtgcagcccaccaagaattttgaaagcaactctacagagtttgttattgatatagaggggccatatgatgctgaagacataacaggtcacacaacggataagacgaagttcattcttgtgaattattcaaactcttcagaagaacataagagccaagatcctacacaagatgaatcagacaacattccaaacaagagcacaaatgtatcaaacatatatcatgcattttaa</cdnaseq>

Protein Sequence

<aaseq>MVSPDLIRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKA DPYLATLLNCMLWVFYGLPIVHPNSILVVTINGIGLVIEAVYLTIFFLFSDKKNKKKM GVVLATEALFMAAVVLGVLLGAHTHQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTK SVEYMPLLLSVEAESYERKVPEILPRQAVEGKGRGAARVLLNCDILLLNCDILSHFCF HSISDQSEISLPENELQALLLSIMFNLFEITSRSLREESNHNSQKHRSVSLATQQMTV ANANEVQSLTSTTPALAKEHPLQVQPTKNFESNSTEFVIDIEGPYDAEDITGHTTDKT KFILVNYSNSSEEHKSQDPTQDESDNIPNKSTNVSNIYHAF</aaseq>

Gene Sequence

<dnaseqindica>1..513#2596..2677#3476..3724#4571..4623#6041..6136#6266..6400#atggtgtccccagacttgatccgcaacatggtgggcatagtcggtaacatcatctcctttggcctcttcctctcgccggtgcccaccttctaccggatcatcaagaataaggacgtgcaggacttcaaggcggacccgtacctggccacgctgctcaactgcatgctctgggttttctatggtctccctatcgtccaccccaacagcattcttgtcgtcaccatcaacggcattggccttgtcatcgaggctgtctaccttaccatcttcttcctcttctccgacaagaagaacaaaaagaagatgggagtggtgctcgctacagaggctctcttcatggcggcggtggtgctcggcgtgcttttgggcgcgcacacccatcagagacgctccttgatcgtcggcatcctctgcgtcatctttggcaccatcatgtactcctcaccactcaccatcatgagtcaggttgtgaagactaagagcgtggagtacatgccattgctgttgtcggtggtgagcttcctcaacggcctctgctggaccatcatacgcgctcatccgcttagacatcttcatcaccatacccaatggtcttggcgtgctctttgctctcatgcaactcatcctctatgccatctactaccgaaccatacccaagaagcaggataagaacctcgagctaccaaccgtcgcccctgtcgctaaggacaccagcatcgtcacccctgtcagcaaggacgacgacgtcgatggcggcaatgccagccatgtcaccatcaatatcacaattgagctataagctagcttagtgatcgaacataactgagtgtctaacactctaagctagttaggtgttaccaacttctacattcaagtaatagtactgtttagtaaccaatgtaatttctgtttcttttatctcattgtgaagttgcaattatatacatcactagaaaaaatacccgtgcgttacaacgggtaatgttattttaatcttattattgttatacagtttagctaggataaaattcattgcgggagtttacttgtatatatttttttagaaaatcatgagctgcaattaggagcccgacttccatctcaagttagcatgcaagtttttttaaagaaatttcttgtacgacttcttctgtattttcaaaagcagatgaacttaaaatccaactcatacacggatctgtatttccaaaagcgaacaaacttaaaaaccgactcaagtacagatgacgtgccaaaatactggcaaaaatatattcaattttttataataatagatatttcaattgggtgtagtgtaacaattgacggcataatatgggatgacacgagatgatcagagttggatagcagacgaaaatttcacctgacgtcttatgaattttttaattagatatagatagatggatacttaatgtaaatttgatacatgaaatttagctccgaggaagtggaaaatatagatttgggagtaatgaccgaaatatttcttctttaatttaatttgggatgtgtgactcatttgcataagagcaagtttaatagtatagctcactactatctccaattttatttatagccaatgtaatagctaattcatacaatagttgcttactatactattaatatatggtcccacctgtcatacacacacggtgttttggagtccgcgctgcagctggctacagatctgtagcctgctgctcttctgtctcatcttttattttattaaaatatatttatagctggctaatagtctgctattgtacctgctctaactctagttccatactaatggctataactttaatgcatgctgcatgcatgcatacatgaaactcccatctgacaaatcaattcttggcagtcagcagcaatgcggcatgatcagagacgcaatgctattccatcgcatgcaagagggggttttaactatttgtcacttttagatttggcaaataactatttgccacccctatctcaatgacatgtgggtccacatgtatctatgacatatgggtccagtggcaaaaagttaattgccacatctaaatgtggcaaatggttaaatattctcatgcaggacgatgcaaacattatcgatcggtaatcatctggaaaggcgcggtccgcggagccatgcgacacacgaggcgtggacagaacagagcgtactaaaaaacgtgagacatatgagacgcagaatccgccttcgatctccatggcgcgtccggattctacgtggcacggacaagtcaagcccaagccgaaaagaaatcgaagacaaattttgacgacgtacgaaaattcttgacaaaagcatcttaaatttttataacgcatttgctattttgtagtcgcctgcaaaattttaatcgattagtcaacttttgtgcacgctatcgggctagtggaaaggctcttttttatatgggtcgtgcttttccatcaccttttccttgctaataaacccagagcccgcagcccacagcctacaaatagctctggaaaaatccaccacacccgtgactctctagagagctcttctgcttctcgacatttctgtttctcgagcaggaggcggagtcctacgagcggaaggtgccggagattcttccaagacaggcagtggaggggaaggggaggggggcggcgagaggtgggctgcgcactgcgagcggccgcggacggcgccgaagaagagaggcgggggagaggagttgatgcactgcaggtttttcatttctcttttttgttcaaatcctcacgccgtggcggcctgatttcctttggtccagatttctatcctgtggattgtgagctattagggctggattagctaccatttcaggggggggggatcccgtggagtttgtttcattgcttgagttttgagttgattttgcccaatgtcgagtaaagcatcctggatctgaaaccacatggtgtgtgtgctttgatgttttgttcgatgtagtttgggaaatttttttaggggtttgctgcacatcgtgtatgatatagtcggcgggaggtgggccgtgcctctgcctggttctaaaccttggcactaattattttctctctaacttcatttgttagggagtttttcagtttcactagttggaactgatatatcatggaatgaacgcacatggttttgctctagatttagtcgttaatcctgtaggccagtgatgacctctgtgctgtggcattttagaaaggggtttagggatttggtagcaattcgagctcaagaactaaccaatatttcattaaatcccagcaaatgctcttacatttgtccctcagtattgtcagattatacagggagttaatcagaggttactatatacagggacagtgtcactgtatacagggaggagttgtgttttctgcttgtagacaaaagctatcttttgttttgtgtgctgtgtattttttttaacggtagtcctgctcaactgtgacatactcctgctcaactgtgacatactaagccacttttgcttccattccatcagtgatcaatctgagataagcctccctgaaaatgaactccaggctctgctcctatcaattatgtttaatctttttgagattaccagtagatcactgagagaggagagtaatcacaattcgcaaaagcatcggtctgtgtcattagcaactcagcaaatgacagtggcaaacgcaaacgagggtgagattaatggaaacagtaggattaatctgaaactaaaatacagagaataaatggacaatataatttgcgatagtactgtataaatggacagtataaagcatatctcttcatatgctacgtacagttatgttgtatcaatgattcacttatttactgctttaaatatggcctcaaactaaaacctatgctttcgatcagcacatgcccttaaattttcattatttctttttctgaaaattatgtatctacgctagttgcactctctgactattgtagtagccattttgaattttcgtgcaagtcgtgtaataattttgtgcaactaatgtttttttaaccaaatttccatttactttgataaatagcgtttgttgtttgggaaaacatgcatacaagtgaggacttttggtagacaacttgttttcttagtaatttcattgccttttctttttctttttattatgatgggaaggagattcaatttttgttttgcgggactcgggatcaacaccacaacaaatcggtggttcttttggatgttaggcgagctcaggtttttctggtgaaaaacctgatctggtgaaaaacctgagcaaactgcggatgctaatacagtagtagtataatcaacagtgactctctttgcaattttttggctgtaacttggggagtagtctaaggatggattggatatagaaggattggcagtggtttgacagtgggatggtagagcttgtggctggaagttagttcccttgttattagttacctttttcttcatttttcataaatccctttggcagtactgatttctttttttataatttgcacaccctttggcagtacaaagtctaacatcaacaacaccagcactagcaaaggagcaccccctacaggtatatgttattattctgttagtttgtaaattttcgttttagacaaatagcacacaaacacaacagatcaaataattgtgccaatgctaagcaaaatttccctaccaccaacaccaatctatccagtccaaaaaaaatgttcattctggactatagcattttttttacttggcatgtatactttctttaaaatctggaacaggactaagcatagcctagttctgcgtcagtactcaatgttaccagaaccataagttactaggcccaaatatctgttttgtatttcacaaatatagaagatatattaggatgttcatacagagccctattagtctattgctcaattaaatttttcaaagcgaacaactatctgttgttcattcaattttttcacataaatcttgttttttttgtcccagtaggctacccatggatcacactgattagttttattttttatcactaattttttaagctataatatgctccaagatttagctatgccacagtccatagctttgcaagctgaaattttttcaatctgaaaatataatctcgctgcacaccatctactccatttttttaatgttgtctcactggtagctgtttctttgatatctgttttgacagcaatacttttttttttgaaataaactttttttcagagaatgttacatgttcccaactatataccataccaccatcaaaaccaactgaacaagaaaactcaaagtcaaacagcaacaaggacaacgcttgcaaagaaacgcagcatgcaggtttttttgttcaatttgtactatagcattatcttgttttgttcatttttttatgtaacaaaagtgtcatgctcccataaacatttatttcgtttgtttagtatgcttaagcaatgtcttgtttagcataatttcactctaaaacaatccttttctagataaaaaagcatccagtaaggactttgtttgtagtcagcaatcaaacaactctgtggcatccaggactagagctaagagattacattcagcatcccctttgtcggttgtatcaattagcccatcgaaaaaaattcttctgaccaaaagattcgcaaagcagtaaggaaacaggtaaaaacactattactttttttatgtcatatcattatatacaatacattattcatggattaaaaaattacaaaaaagtttgcataatataagttcatttttttcagtccttgaaagcaacataacttatcagtactcaaccagacagggaagaatcaaacaaggatggtcttttcgtggaacctatatgtactatactagccaaaaaggaggaggtaaagttcaaaattaggcaagagtcaaaatttcaaaccattatatttttccccctggcttttcactacatgtcatttttttttgtaaaaaaggtgcagcccaccaagaattttgaaagcaactctacagagtttgttattgatatagaggggccatatgatgctgaagacataacaggtcacacaacggtaatagaaaaagattttttttgactacataatgtacttttttaaaaaaataattttttgttccatttttgtttcaatgattttaatcgatctatatctttttttattatgcttttttaatatttttaggataagacgaagttcattcttgtgaattattcaaactcttcagaagaacataagagccaagatcctacacaagatgaatcagacaacattccaaacaagagcacaaatgtatcaaacatatatcatgcattttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0258700, RefSeq:Os09g0258700