Os09g0292900

From RiceWiki
Revision as of 07:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0292900| Description = Galactose oxidase, central domain containing protein| Version = NM_001069325.1 GI:115478389 GeneID:4346638| Length =...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0292900

Description

Galactose oxidase, central domain containing protein

Version

NM_001069325.1 GI:115478389 GeneID:4346638

Length

1377 bp

Definition

Oryza sativa Japonica Group Os09g0292900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7438948..7440324

Sequence Coding Region

7438986..7440170

Expression

GEO Profiles:Os09g0292900

Genome Context

<gbrowseImage1> name=NC_008402:7438948..7440324 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:7438948..7440324 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcacctgcacggcgacgtgctcgagtcggcggtggagcgcgtgccggcgcccgatctcgccgccgcggcgctggtgtcacgggagtggctccgcgcggtgcgcgccgcgctgcgacggcgcatgctgcggctgccgtggctcgtcgtccacgtgatccatctccggggccagcggcgcctcgccgcggcttacgacccgcgctccggggcgtggctcgccgtgcccacggcgccaccggcgcgccacggcgcgacgtcgccgccgcagccgcactcgcacgtccgcctgatgcggggcgcgagcggggaccgcgtctgcgcgctctcgctctccgggctcgccgtggcgcgggacgctctcgggatggacgacgacgcgctcgtcgtcgcgctcaaggcccccggcgtgtggcgcgtcgatccggtgctcgccgcggtgggtgaccgcgtggtcgccatgggcggcgcgtgccggctggcgctgggtgacggggaggacacctcggccgtcgaggtccacgagcgcggcggctggacgcactgcggcgcggtgccgaccgcgctccgggagtccgcggcggcggcagcgacgtggctctcgacggcggcgacggatcagagagtgtacgtcgcggacagagccacggggacggcgagctggttcgacccggcgaagcagcagtggggacccacctcccgcctccgccctgacgccaccgtctccacatggggcctcgccgccggccgcgccggcgccgagaagatcatcctgttcggagtgaagcatgcagacagccgagtcgtcatccgatcatgggaggtggacggcgacagcctctccctgtcccatggcgcggcggcggcgcacgacacgatgccgagcgagatgtccgagaggctgttcccgcacggcgacgacggcgaggaggagacgtcgtcgccgtcgatcggggtgtgcggcaacaccgccggtgggtacgtgtacaatgcggccgtgccggcgacgggcgccgtcctctacgagctccggcggggcggggtggagggcggcggcgtggagcggtgggcgtgggttgcgtgcgcgccggtggtggccgaagcggaggcgttgggacgcgtcatcctcgcgtgttcgccggtggggctgcacgagcttgcggacgaacggcttgcacactga</cdnaseq>

Protein Sequence

<aaseq>MQHLHGDVLESAVERVPAPDLAAAALVSREWLRAVRAALRRRML RLPWLVVHVIHLRGQRRLAAAYDPRSGAWLAVPTAPPARHGATSPPQPHSHVRLMRGA SGDRVCALSLSGLAVARDALGMDDDALVVALKAPGVWRVDPVLAAVGDRVVAMGGACR LALGDGEDTSAVEVHERGGWTHCGAVPTALRESAAAAATWLSTAATDQRVYVADRATG TASWFDPAKQQWGPTSRLRPDATVSTWGLAAGRAGAEKIILFGVKHADSRVVIRSWEV DGDSLSLSHGAAAAHDTMPSEMSERLFPHGDDGEEETSSPSIGVCGNTAGGYVYNAAV PATGAVLYELRRGGVEGGGVERWAWVACAPVVAEAEALGRVILACSPVGLHELADERL AH</aaseq>

Gene Sequence

<dnaseqindica>39..1223#gcgtgcgagacggcgtcgcgtcgctcgccacgacggacatgcagcacctgcacggcgacgtgctcgagtcggcggtggagcgcgtgccggcgcccgatctcgccgccgcggcgctggtgtcacgggagtggctccgcgcggtgcgcgccgcgctgcgacggcgcatgctgcggctgccgtggctcgtcgtccacgtgatccatctccggggccagcggcgcctcgccgcggcttacgacccgcgctccggggcgtggctcgccgtgcccacggcgccaccggcgcgccacggcgcgacgtcgccgccgcagccgcactcgcacgtccgcctgatgcggggcgcgagcggggaccgcgtctgcgcgctctcgctctccgggctcgccgtggcgcgggacgctctcgggatggacgacgacgcgctcgtcgtcgcgctcaaggcccccggcgtgtggcgcgtcgatccggtgctcgccgcggtgggtgaccgcgtggtcgccatgggcggcgcgtgccggctggcgctgggtgacggggaggacacctcggccgtcgaggtccacgagcgcggcggctggacgcactgcggcgcggtgccgaccgcgctccgggagtccgcggcggcggcagcgacgtggctctcgacggcggcgacggatcagagagtgtacgtcgcggacagagccacggggacggcgagctggttcgacccggcgaagcagcagtggggacccacctcccgcctccgccctgacgccaccgtctccacatggggcctcgccgccggccgcgccggcgccgagaagatcatcctgttcggagtgaagcatgcagacagccgagtcgtcatccgatcatgggaggtggacggcgacagcctctccctgtcccatggcgcggcggcggcgcacgacacgatgccgagcgagatgtccgagaggctgttcccgcacggcgacgacggcgaggaggagacgtcgtcgccgtcgatcggggtgtgcggcaacaccgccggtgggtacgtgtacaatgcggccgtgccggcgacgggcgccgtcctctacgagctccggcggggcggggtggagggcggcggcgtggagcggtgggcgtgggttgcgtgcgcgccggtggtggccgaagcggaggcgttgggacgcgtcatcctcgcgtgttcgccggtggggctgcacgagcttgcggacgaacggcttgcacactgaactaataatggctatcgtgacatgttgtcgatagccagttgagcttgtaataagcatatagggctgttacactctgaaaaataagtttggatactcccaccggttttataataattctcgttgttttggacaataataacacggcatattcact</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0292900, RefSeq:Os09g0292900