Os09g0293500

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Revision as of 07:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0293500| Description = Protein kinase-like domain containing protein| Version = NM_001069327.2 GI:297609165 GeneID:4346640| Length = 4701 b...")
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Gene Name

Os09g0293500

Description

Protein kinase-like domain containing protein

Version

NM_001069327.2 GI:297609165 GeneID:4346640

Length

4701 bp

Definition

Oryza sativa Japonica Group Os09g0293500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7520678..7525378

Sequence Coding Region

7520979..7524623

Expression

GEO Profiles:Os09g0293500

Genome Context

<gbrowseImage1> name=NC_008402:7520678..7525378 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:7520678..7525378 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcctcgccgccgttcatggcggccgcggcgttccttacgcttgtggtggtgctgtttcgggcgccggctcccgccattgccgtcggcgaggaggcggcggcgctgctggccttcaggcgcgcgtccgtggcggacgacccggacggcgcgctggcgagctgggtgctgggcgccggcggcgccaactccaccgcgccgtgctcgtgggacggcgtgtcgtgcgcgccgccgcccgacggccgcgtcgccgccgtcgacctcagcggcatgagcctcgccggcgagctgcggctcgacgcgctcctcgcgctcccggcgctgcagcgcctcaatctccgcggcaatgccttctacggcaacctctcgcacgccgcgccgtcgccgccgtgcgcgctcgtggaggtggacatctcgtcgaacgccttgaacgggacgctgccgccgtcgttcctggcgccgtgcggcgtgctgcggtccgtgaacctgtcgaggaacggcctcgccggcggcgggttcccgttcgcgccgtcgctgcggtcgctggacctgtcgcgcaaccgcctcgccgacgccggcctgctcaactactccttcgccggctgccacggcgtcggctacctcaacctctccgccaacctcttcgccgggcggctgccggagctcgccgcgtgcagcgcggtgaccacgctcgacgtgtcgtggaaccacatgtccggcgggctcccgccggggctcgtggccaccgcgccggccaacctgacgtacctcaacatcgccggcaacaacttcaccggcgatgtctccggctacgacttcggcgggtgcgccaacctcacggtgctcgactggtcctacaatggcctaagtagcaccaggttgccaccggggctcatcaactgccgccgcctcgagacgctggagatgtccgggaacaagctcctctctggcgcgctgccgacattcttggtcggcttctcgtcgctgaggcggctggcattggccggcaacgagttcaccggagcgattccggtggagctggggcaattgtgtggcagaattgttgagctggacttatccagcaaccggctggttggtgccttgccggcgagctttgcaaagtgcaagtctcttgaggtgctcgacctcggtggcaaccagctcgccggcgactttgtggccagtgtcgtcagcaccatcgcctcgctgcgtgagctgcggctgtcgttcaacaacatcaccggtgtaaacccgctgccggtgctcgcagcggggtgtccattgctggaggtgattgatcttgggtccaatgagctcgatggggagataatgccggatctttgctcgtcgttgccatcattgcggaagctgctccttccgaacaattacctcaatggcaccgtgccgccttcgcttggcgattgcgccaatctggagtccattgatctcagcttcaatctgctggttggcaagatcccaacagagataatcaggcttccgaagatcgttgatctggtcatgtgggcgaatggcctatccggtgagataccggatgttctctgctccaatggcaccacattggagacattggtgataagctacaacaacttcaccggaagcattccaagatccattacaaagtgtgtgaatctcatctgggtgtcgctttccggtaaccgtcttaccgggagcgtgcccggtggattcggcaagcttcagaagcttgccattctgcaactcaacaagaatctgctatctggacatgttccagcagagcttggcagctgcaacaacctcatctggcttgatctcaacagcaacagcttcaccgggacgataccgccgcagttggcaggccaggcagggcttgttccgggaggtattgtgtcaggaaagcagtttgcatttctccggaatgaggctggcaacatatgccctggtgccggtgttctctttgagttctttggcatcaggccagagcggttggctgagttccctgcagtgcatctgtgcccatccacaaggatttacacgggcacgacggtttatacattcaccaacaatgggagtatgatcttccttgatctctcatacaatggcctcaccggcacaatcccaggaagtcttggaaacatgatgtatcttcaggtccttaacttggggcacaatgagctcaatggtacaataccggatgcatttcagaacctcaagtcgatcggcgcactcgatctctcaaacaatcagctcagtggtggcattcctccaggccttggtggtttgaatttccttgcagattttgatgtctccaacaacaacctgactggtccaatcccttcatccgggcagctcaccacgttcccgccatcccggtacgacaacaacaatggtctctgtggcatccctttgcctccttgtggccacaatcccccatggggaggtaggccacgcggttcgcctgatgggaagaggaaggtgattggggcgagcattcttgtcggggtggcactctccgtgctcatactgctcctgctgctggtcactctctgcaagctcaggatgaaccagaagactgaagaggtgagaactgggtatgttgagagccttccaacatctggaacatcgagttggaagctgtcgggtgtccgtgagccgctaagcatcaatgtggcgacattcgagaagccgctgaggaagctcacatttgcacacctccttgaggccaccaatggattcagtgctgagactctcattggatcagggggatttggtgaggtatacaaggccaagctcaaggatggcagtgttgtggccatcaagaaactgattcacttcactggccaaggtgaccgggaattcactgcagagatggagaccattggaaagatcaagcaccgcaaccttgtcccattgcttggatattgcaagattggtgatgagaggctccttgtctacgagtacatgaaacacggcagcctggatgttgtgctccatgacaaggccaaggctagtgtgaagcttgactggtcagcaagaaagaaaattgcaattggttcagccaggggcctcgcattcctccaccacagctgcatcccacacatcatacaccgggacatgaagtcgagcaatgtgcttcttgacaacaacctcgatgcccgtgtatcggatttcgggatggcaaggctgatgaatgcgcttgatacgcatctgagtgtgagcacacttgcaggtacacctgggtatgtgccacctgagtactaccaaagcttcaggtgcacgaccaaaggcgacgtctacagctatggtgttgtgctcttggagctcctctcaggtaagaagccaattgatccgactgagtttggagacaacaaccttgttggttgggtgaagcagatggttaaagagaacagaagcagtgagatctttgatcctacattgactgatagaaaatcaggggaagcagagctctatcagtacctgaagattgcatgcgagtgcttggatgatcgacccaaccgaaggccaaccatgattcaggtcatggcaatgttcaaagagctgcagcttgactcggacagtgatatcctcgatggcttttcgatcaattcgtcaactatagatgagtcaggagagaaatcaatgtaa</cdnaseq>

Protein Sequence

<aaseq>MAASPPFMAAAAFLTLVVVLFRAPAPAIAVGEEAAALLAFRRAS VADDPDGALASWVLGAGGANSTAPCSWDGVSCAPPPDGRVAAVDLSGMSLAGELRLDA LLALPALQRLNLRGNAFYGNLSHAAPSPPCALVEVDISSNALNGTLPPSFLAPCGVLR SVNLSRNGLAGGGFPFAPSLRSLDLSRNRLADAGLLNYSFAGCHGVGYLNLSANLFAG RLPELAACSAVTTLDVSWNHMSGGLPPGLVATAPANLTYLNIAGNNFTGDVSGYDFGG CANLTVLDWSYNGLSSTRLPPGLINCRRLETLEMSGNKLLSGALPTFLVGFSSLRRLA LAGNEFTGAIPVELGQLCGRIVELDLSSNRLVGALPASFAKCKSLEVLDLGGNQLAGD FVASVVSTIASLRELRLSFNNITGVNPLPVLAAGCPLLEVIDLGSNELDGEIMPDLCS SLPSLRKLLLPNNYLNGTVPPSLGDCANLESIDLSFNLLVGKIPTEIIRLPKIVDLVM WANGLSGEIPDVLCSNGTTLETLVISYNNFTGSIPRSITKCVNLIWVSLSGNRLTGSV PGGFGKLQKLAILQLNKNLLSGHVPAELGSCNNLIWLDLNSNSFTGTIPPQLAGQAGL VPGGIVSGKQFAFLRNEAGNICPGAGVLFEFFGIRPERLAEFPAVHLCPSTRIYTGTT VYTFTNNGSMIFLDLSYNGLTGTIPGSLGNMMYLQVLNLGHNELNGTIPDAFQNLKSI GALDLSNNQLSGGIPPGLGGLNFLADFDVSNNNLTGPIPSSGQLTTFPPSRYDNNNGL CGIPLPPCGHNPPWGGRPRGSPDGKRKVIGASILVGVALSVLILLLLLVTLCKLRMNQ KTEEVRTGYVESLPTSGTSSWKLSGVREPLSINVATFEKPLRKLTFAHLLEATNGFSA ETLIGSGGFGEVYKAKLKDGSVVAIKKLIHFTGQGDREFTAEMETIGKIKHRNLVPLL GYCKIGDERLLVYEYMKHGSLDVVLHDKAKASVKLDWSARKKIAIGSARGLAFLHHSC IPHIIHRDMKSSNVLLDNNLDARVSDFGMARLMNALDTHLSVSTLAGTPGYVPPEYYQ SFRCTTKGDVYSYGVVLLELLSGKKPIDPTEFGDNNLVGWVKQMVKENRSSEIFDPTL TDRKSGEAELYQYLKIACECLDDRPNRRPTMIQVMAMFKELQLDSDSDILDGFSINSS TIDESGEKSM</aaseq>

Gene Sequence

<dnaseqindica>756..4400#tgcttttgtactagtagtagtagtaatctgcttctctcttcttcatcttcttctcttgtcttcccttttcttctagtctatcctcgttggctcagttcttggagaggttttttgttcgagttgtgtgagagagaattcgtccattcttgatgaggttttgggttcttgggcacttcttgttctagccaaggtgagaggttaaggttaattcttctttagatggagctttttgaaaatgtttggttgttttgttggtggtttgtttgggtttcttgatggttttgtggcttcttttgttcttggagaaatatgtaaggggttgggttcttttggattttatttggggtacgaataattgaagttcgtttctgtgctaatttggttcgtgggttgtatctatcaattgtcttgattttgagggattaatgtgtagtttgtgcgaggaattttgattttggttcaaactgttgttgttgggcgctttcccttgcaaagattccttgtgtttcttccttttgggtgttttgagtcgattcatgccgcgaatttgggttgaatttgtttgccacaatgacgcggaagtgaaattttgaattgatttttgcagagaaattgcgatttgaatacgctccatcgatatgtgaagccatccaagaactcggtggaaatcaagaattcagaggccatctcgaacgagctcaccatctgcttgcaagaatcagcgagtgcgaagttgacgtagacgacgagaagccatggccgcctcgccgccgttcatggcggccgcggcgttccttacgcttgtggtggtgctgtttcgggcgccggctcccgccattgccgtcggcgaggaggcggcggcgctgctggccttcaggcgcgcgtccgtggcggacgacccggacggcgcgctggcgagctgggtgctgggcgccggcggcgccaactccaccgcgccgtgctcgtgggacggcgtgtcgtgcgcgccgccgcccgacggccgcgtcgccgccgtcgacctcagcggcatgagcctcgccggcgagctgcggctcgacgcgctcctcgcgctcccggcgctgcagcgcctcaatctccgcggcaatgccttctacggcaacctctcgcacgccgcgccgtcgccgccgtgcgcgctcgtggaggtggacatctcgtcgaacgccttgaacgggacgctgccgccgtcgttcctggcgccgtgcggcgtgctgcggtccgtgaacctgtcgaggaacggcctcgccggcggcgggttcccgttcgcgccgtcgctgcggtcgctggacctgtcgcgcaaccgcctcgccgacgccggcctgctcaactactccttcgccggctgccacggcgtcggctacctcaacctctccgccaacctcttcgccgggcggctgccggagctcgccgcgtgcagcgcggtgaccacgctcgacgtgtcgtggaaccacatgtccggcgggctcccgccggggctcgtggccaccgcgccggccaacctgacgtacctcaacatcgccggcaacaacttcaccggcgatgtctccggctacgacttcggcgggtgcgccaacctcacggtgctcgactggtcctacaatggcctaagtagcaccaggttgccaccggggctcatcaactgccgccgcctcgagacgctggagatgtccgggaacaagctcctctctggcgcgctgccgacattcttggtcggcttctcgtcgctgaggcggctggcattggccggcaacgagttcaccggagcgattccggtggagctggggcaattgtgtggcagaattgttgagctggacttatccagcaaccggctggttggtgccttgccggcgagctttgcaaagtgcaagtctcttgaggtgctcgacctcggtggcaaccagctcgccggcgactttgtggccagtgtcgtcagcaccatcgcctcgctgcgtgagctgcggctgtcgttcaacaacatcaccggtgtaaacccgctgccggtgctcgcagcggggtgtccattgctggaggtgattgatcttgggtccaatgagctcgatggggagataatgccggatctttgctcgtcgttgccatcattgcggaagctgctccttccgaacaattacctcaatggcaccgtgccgccttcgcttggcgattgcgccaatctggagtccattgatctcagcttcaatctgctggttggcaagatcccaacagagataatcaggcttccgaagatcgttgatctggtcatgtgggcgaatggcctatccggtgagataccggatgttctctgctccaatggcaccacattggagacattggtgataagctacaacaacttcaccggaagcattccaagatccattacaaagtgtgtgaatctcatctgggtgtcgctttccggtaaccgtcttaccgggagcgtgcccggtggattcggcaagcttcagaagcttgccattctgcaactcaacaagaatctgctatctggacatgttccagcagagcttggcagctgcaacaacctcatctggcttgatctcaacagcaacagcttcaccgggacgataccgccgcagttggcaggccaggcagggcttgttccgggaggtattgtgtcaggaaagcagtttgcatttctccggaatgaggctggcaacatatgccctggtgccggtgttctctttgagttctttggcatcaggccagagcggttggctgagttccctgcagtgcatctgtgcccatccacaaggatttacacgggcacgacggtttatacattcaccaacaatgggagtatgatcttccttgatctctcatacaatggcctcaccggcacaatcccaggaagtcttggaaacatgatgtatcttcaggtccttaacttggggcacaatgagctcaatggtacaataccggatgcatttcagaacctcaagtcgatcggcgcactcgatctctcaaacaatcagctcagtggtggcattcctccaggccttggtggtttgaatttccttgcagattttgatgtctccaacaacaacctgactggtccaatcccttcatccgggcagctcaccacgttcccgccatcccggtacgacaacaacaatggtctctgtggcatccctttgcctccttgtggccacaatcccccatggggaggtaggccacgcggttcgcctgatgggaagaggaaggtgattggggcgagcattcttgtcggggtggcactctccgtgctcatactgctcctgctgctggtcactctctgcaagctcaggatgaaccagaagactgaagaggtgagaactgggtatgttgagagccttccaacatctggaacatcgagttggaagctgtcgggtgtccgtgagccgctaagcatcaatgtggcgacattcgagaagccgctgaggaagctcacatttgcacacctccttgaggccaccaatggattcagtgctgagactctcattggatcagggggatttggtgaggtatacaaggccaagctcaaggatggcagtgttgtggccatcaagaaactgattcacttcactggccaaggtgaccgggaattcactgcagagatggagaccattggaaagatcaagcaccgcaaccttgtcccattgcttggatattgcaagattggtgatgagaggctccttgtctacgagtacatgaaacacggcagcctggatgttgtgctccatgacaaggccaaggctagtgtgaagcttgactggtcagcaagaaagaaaattgcaattggttcagccaggggcctcgcattcctccaccacagctgcatcccacacatcatacaccgggacatgaagtcgagcaatgtgcttcttgacaacaacctcgatgcccgtgtatcggatttcgggatggcaaggctgatgaatgcgcttgatacgcatctgagtgtgagcacacttgcaggtacacctgggtatgtgccacctgagtactaccaaagcttcaggtgcacgaccaaaggcgacgtctacagctatggtgttgtgctcttggagctcctctcaggtaagaagccaattgatccgactgagtttggagacaacaaccttgttggttgggtgaagcagatggttaaagagaacagaagcagtgagatctttgatcctacattgactgatagaaaatcaggggaagcagagctctatcagtacctgaagattgcatgcgagtgcttggatgatcgacccaaccgaaggccaaccatgattcaggtcatggcaatgttcaaagagctgcagcttgactcggacagtgatatcctcgatggcttttcgatcaattcgtcaactatagatgagtcaggagagaaatcaatgtaatgctgtctagttcttgcagattttgattatccgaagtggtaaaatatcagactagctcaaccattttggctccatggtagaaaaaaaggtagtatcctccaattcagtaggaaaagttgtaattttggttcaaatcactgtacataatacatcaaagtatgaaggagaacacggtggtaggatttaatttcagaaaaaaaaggcagttctctttacctggagagactagtatgtaccaatcaaatttcttgcttttgagcatcaatattgtcaagaatgtaatacatattagctttcctta</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0293500, RefSeq:Os09g0293500