Os09g0296800

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Revision as of 07:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0296800| Description = Chlorophyll A-B binding protein family protein| Version = NM_001069336.1 GI:115478411 GeneID:4346649| Length = 2922 ...")
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Gene Name

Os09g0296800

Description

Chlorophyll A-B binding protein family protein

Version

NM_001069336.1 GI:115478411 GeneID:4346649

Length

2922 bp

Definition

Oryza sativa Japonica Group Os09g0296800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7750930..7753851

Sequence Coding Region

7750931..7751226,7751314..7751460,7752479..7752611,7753015..7753107,7753321..7753617

Expression

GEO Profiles:Os09g0296800

Genome Context

<gbrowseImage1> name=NC_008402:7750930..7753851 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:7750930..7753851 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctccaccactcctcctgcgcctccgctcacccgcgccacccgccgccgtcgccgccgggtccctctcccggcggcggcggcggcgcagggccggcctcgcgccggtgcgagcgtcgtggcaggagcttgcgggggtgctggtgttctccgccgtgcccttcacggccgtcaaggccctcgccaacagccccctcggcgcccgcctccgccgccgcctcgacgaccggaaggccgccgccgccgccgaggccgacgccctccgctccgccgcgcgccaagcccgcaccgccagctcgtggtatggggatgaacggccgcggtggctaggccccgtgccgtacgagtacccggcgcatctcaccggagagtaccctggcgattacgggttcgatattgcaggcctgggcagggatcccgttgctttcgcaaactacttcaactttgagatcttgcattgtcggtgggccatgcttgctgctcttggtgttgttgttcctgaactgttagatctttttggagtagtccattttgtcgagcctgtttggtggaaagttggttacgcaaaacttcagggtgacactcttgattaccttggaattcctggtttccgaatcgctggtggtcagggtgtcattgtcatcgctatctgtcaagcccttttgatggttggtccagaatatgcaaggtactgcgggattgaggctctagaacccttgggattatatcttccgggagacataaactacccgggaggagcactcttcgatcccttggggctctccaaagatccagtcgcgttcgaagatctaaaggtgaaggagatcaagaacggtcgcctggcaatggttgcatggctcggcttctacatccaggcagctgtaactggcaagggtcctattcagaaccttgttgaacacttgtcggacccgctgcataacaacattttgtcctcttttgtttga</cdnaseq>

Protein Sequence

<aaseq>MPPPLLLRLRSPAPPAAVAAGSLSRRRRRRRAGLAPVRASWQEL AGVLVFSAVPFTAVKALANSPLGARLRRRLDDRKAAAAAEADALRSAARQARTASSWY GDERPRWLGPVPYEYPAHLTGEYPGDYGFDIAGLGRDPVAFANYFNFEILHCRWAMLA ALGVVVPELLDLFGVVHFVEPVWWKVGYAKLQGDTLDYLGIPGFRIAGGQGVIVIAIC QALLMVGPEYARYCGIEALEPLGLYLPGDINYPGGALFDPLGLSKDPVAFEDLKVKEI KNGRLAMVAWLGFYIQAAVTGKGPIQNLVEHLSDPLHNNILSSFV</aaseq>

Gene Sequence

<dnaseqindica>2..297#385..531#1550..1682#2086..2178#2392..2688#aatgcctccaccactcctcctgcgcctccgctcacccgcgccacccgccgccgtcgccgccgggtccctctcccggcggcggcggcggcgcagggccggcctcgcgccggtgcgagcgtcgtggcaggagcttgcgggggtgctggtgttctccgccgtgcccttcacggccgtcaaggccctcgccaacagccccctcggcgcccgcctccgccgccgcctcgacgaccggaaggccgccgccgccgccgaggccgacgccctccgctccgccgcgcgccaagcccgcaccgccaggtagtacaactacactcgcagagattaccggccttgcatcagctagctataagctcaagctgctaaacatttcgattgcttttgaagctcgtggtatggggatgaacggccgcggtggctaggccccgtgccgtacgagtacccggcgcatctcaccggagagtaccctggcgattacgggttcgatattgcaggcctgggcagggatcccgttgctttcgcaaactacttcaagtatgtcactgttgcaattttctgatccatttacatttgagaatttatattactttgcaaataaaaaaagatagtagaagagtactggttagggcctgatggcagcttgcaaattgcaactatctagtttgtctgctccacattgtattcggtcctaaatgctaagtaatcaggtgtgcaccttcctgttcactgttctttctgattatgtgtttgtatatttccttccaggaagtaaaatgtactcaattgttaaatgccaacaattgtcacgcttcctttagtactgcaaaatagctttccatgcaccaatcctggtttatttttaacgtgtacaaagaactcgttgtctacaagattgtttgatagctttgcgtgaggttgctcatgcagatgtacaatatacaaataaaacttgtttgttttatgtagaagctagatcattttttaaaaaaattataaaaacatgtttcacatgatttaatttttatacactcatgtctttgtgctccactttgctcctcatactttagactaaaatagttgcataaaaatatgctatctgtgtctttgagtttcattttccccgaggatcttctatgttagaatagagactcgtactgttgaatgtacatagaatgcatctgttcaataatggataaggttctgtttttggtgacgtccatgcctctttttcagggttaagctgctccagtgcgtatatagcttataatagtaaatcatttcctttgtgtaccagaaactggtattgacaggctggaccacctacgtgataattggggtactaggactattgaaagtggcaatattattatgccttctaaattgtaacagtgagttaactgaatcaagtctttttgtaatgttgtttgcagtagctcctgtaaacccaaagtttcttgtgacatcgtgatctgaacttctcttgttgtagcttgtgtctttcttcctattcacaatttcaactcctcattttcactgatgatcttgcctgcagctttgagatcttgcattgtcggtgggccatgcttgctgctcttggtgttgttgttcctgaactgttagatctttttggagtagtccattttgtcgagcctgtttggtggaaagttggttacgcaaaacttcaggtaagtttcagtgttgtactactcaaatatccatgcctcagttcatttagcacacaattgaccgtcagatcaaaacaaaccatcagatcagtgctaattgcatgtctaatagcccatccttatagattgcaccccttccatctagactagcaatataggactaaacatcccaccaattgttctcacttgccatgcatgtggacctttcagactttttttgttggaatttctgtttgttcctttgacatacagttcagcttggaaacaaactagatatgtaactcttgctgccagtgaacagatttgcatgctctaccaacaaaaatggcgagctggataaggaaattgattatttcttagttgtgttaatttgtttcattcaaccaatgagttaattttacagggtgacactcttgattaccttggaattcctggtttccgaatcgctggtggtcagggtgtcattgtcatcgctatctgtcaagcccttttgatggtaacataaagttttttttttcttttaatcatgtactttctttttctcttccttgtgtacttcttcaaacactttggagttgtcaacagtcacctcacgtatattcatcagtattgtaggattattctgctgttacatcattctcttgttagttctttgtttccaattattcagcgcatttgataacggttttttcaccccatgacttgttaggttggtccagaatatgcaaggtactgcgggattgaggctctagaacccttgggattatatcttccgggagacataaactacccgggaggagcactcttcgatcccttggggctctccaaagatccagtcgcgttcgaagatctaaaggtgaaggagatcaagaacggtcgcctggcaatggttgcatggctcggcttctacatccaggcagctgtaactggcaagggtcctattcagaaccttgttgaacacttgtcggacccgctgcataacaacattttgtcctcttttgtttgagccttcttttaatggacatagcagctgtgtcctgtttggtcacatgaacagtaggacttatgtgcagctagcgtttatatttactggttttgaacactagttagctatttacacatgtaaatatgtaacactggataagaagatttatgtggggtttgtaaatggcatgtcttcaaacaaagtttacacgccgcaagaaatcggccacattgtcaataagactaaattgattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0296800, RefSeq:Os09g0296800