Os09g0297400

From RiceWiki
Revision as of 07:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0297400| Description = Similar to Phosphate/phosphoenolpyruvate translocator| Version = NM_001069340.1 GI:115478419 GeneID:4346653| Length ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0297400

Description

Similar to Phosphate/phosphoenolpyruvate translocator

Version

NM_001069340.1 GI:115478419 GeneID:4346653

Length

3470 bp

Definition

Oryza sativa Japonica Group Os09g0297400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7787900..7791369

Sequence Coding Region

7788232..7788308,7788392..7788521,7788693..7788761,7788847..7788966,7789256..7789340
,7789465..7789550,7789662..7789814,7789908..7790030,7790874..7791257

Expression

GEO Profiles:Os09g0297400

Genome Context

<gbrowseImage1> name=NC_008402:7787900..7791369 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:7787900..7791369 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagagcgcggcggccgtcgggctcctccggccatgcggcgccaccaccgccgccgccccgctccagctccgcaaccctagcccccggggcttcggcgtcggagtcgggcagccgctgctcccgccgagggggctccgcctctccgccgtggccccgcgcgcgggcatctccgcccggcgcatcgggctcgtgccggcctccccggagcaggaggatgagcggcggcggggcgcacgcgacgtggccgtggcggcgacagcggcggcggcgggtgaggcaggggcggaggagggtggagggctcgcgaagacgctgcagctcggcgcgctcttcgggctgtggtacctcttcaacatctacttcaacatctacaacaagcaggttttgaaggtttttccataccccataaacatcacaaatgtccagtttgctgtcggcactgtcattgctctgttcatgtggattaccggtatccttaaaagaccaaagatctccggtgcgcagcttgctgctatccttcctctcgctatggtccacaccatgggcaatcttttcacgaacatgagccttggaaaggttgcagtgtcatttacacatactatcaaggctatggagcctttcttttcagttctgctttcagcacttttcctcggagagatgcctactccttttgttgtattgtctcttgttccaattgttggtggtgtggcattggcatctcttactgaagcttcatttaactgggctggattttggagtgcaatggcctcaaatgtcaccttccagtcaaggaatgtgttgagcaagaagcttatggtgaagaaggaggaatctctggacaacattaccctcttctcaatcattacagtgatgtcattcttcctcttggccccagtaaccttgctaacagagggtgtcaaagtcactccgacagttctgcagtctgctggtctgaacttaaaacagatatacacaaggtcactgattgctgcgttctgtttccatgcataccaacaggtgtcgtacatgatcctggcaagagtgtcccctgttactcactcggtgggtaactgtgtcaagcgagtggtggtcattgtgacatccgttctgttcttccgcacccctgtttcgcctatcaactctctgggaaccggagtcgctcttgccggagttttcctgtactcacaattgaagcggcttaaacccaagcccaagactgcctga</cdnaseq>

Protein Sequence

<aaseq>MQSAAAVGLLRPCGATTAAAPLQLRNPSPRGFGVGVGQPLLPPR GLRLSAVAPRAGISARRIGLVPASPEQEDERRRGARDVAVAATAAAAGEAGAEEGGGL AKTLQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITNVQFAVGTVIALFMWITGIL KRPKISGAQLAAILPLAMVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSALFL GEMPTPFVVLSLVPIVGGVALASLTEASFNWAGFWSAMASNVTFQSRNVLSKKLMVKK EESLDNITLFSIITVMSFFLLAPVTLLTEGVKVTPTVLQSAGLNLKQIYTRSLIAAFC FHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVTSVLFFRTPVSPINSLGTGVALAGV FLYSQLKRLKPKPKTA</aaseq>

Gene Sequence

<dnaseqindica>3062..3138#2849..2978#2609..2677#2404..2523#2030..2114#1820..1905#1556..1708#1340..1462#113..496#gccatcctcgagcactccgccgccgccgccgccgccgcctcgacgcatccgcttccccccacgcgagccgaagcttctagaaccttcgaggccgcggctcccacgggcggcaatgcagagcgcggcggccgtcgggctcctccggccatgcggcgccaccaccgccgccgccccgctccagctccgcaaccctagcccccggggcttcggcgtcggagtcgggcagccgctgctcccgccgagggggctccgcctctccgccgtggccccgcgcgcgggcatctccgcccggcgcatcgggctcgtgccggcctccccggagcaggaggatgagcggcggcggggcgcacgcgacgtggccgtggcggcgacagcggcggcggcgggtgaggcaggggcggaggagggtggagggctcgcgaagacgctgcagctcggcgcgctcttcgggctgtggtacctcttcaacatctacttcaacatctacaacaagcaggtgaggcggctttaactttgatccattgccgtcgccaatttggcggagatttgggggagactaggatgtttcatttgggatttattacatgtgattctgttagtggtgaatggttcgctgatggcaatctgatcttggatcgggcattcgccttttagattcagcaaagatctactcgctccgttgagattgttgagcaaaagagggaactattttgaaattgattttatttgtcttgtgaatcacttctaattataaccttttttgcctccatatgctggtatatgtcgttttctgtaaatgtttctaacccacttactgaatgggtgcaagaatttgctcaagctcgtctagatcttggattagtacaaactcaaaatgtatattgtggaaagaagagcgatttagtttatttcgttgggcttttagagatgttcccccacgttacaccttttctatcaaacttttgtcacaactttctaaaaggtacatttgtggatagtttatgtttgtatctggtataagatgtcgaacgggtaatattgctaaaatcatgtcttctagtgagtgcagtagacaatttcccatgtcttctggtagaaatatagaatatagaaggaaaaagaacaaacatttcttcaaagttgtccagactcatatgtatccatgtcttatagtgagtatatccaatgttctaccaaaacaaattgtgctagggatggaagtttgttttcgttcattatatatggtgtcacttatggttaatctgttgaaatttcttgatctcctcattggcttcgtgtagataaaacaactttcctttattgttcctatgtgtgacaggttttgaaggtttttccataccccataaacatcacaaatgtccagtttgctgtcggcactgtcattgctctgttcatgtggattaccggtatccttaaaagaccaaagatctccggtgcgcaggtaattatatttctctataagatacatcgtgacaacattcgatacacatgtattgcactatgaagccaactattgtaactgtccttatttcagcttgctgctatccttcctctcgctatggtccacaccatgggcaatcttttcacgaacatgagccttggaaaggttgcagtgtcatttacacatactatcaaggctatggagcctttcttttcagttctgctttcagcacttttcctcggagaggtaattttttaatgttctgcactggtgcccagtgataactatgcaaccgcatataatcttagaaaaaccatctgtttcttggtttggttctcatacataatcactttgcagatgcctactccttttgttgtattgtctcttgttccaattgttggtggtgtggcattggcatctcttactgaagcttcatttaactggtaagggatatagctagctatttttgtcttcgctgtggaaactgcaaatataacataagcctgctgatagcagagctaacaaagtgctatatgcttgattcgtctgtaatttatatgatatcagggctggattttggagtgcaatggcctcaaatgtcaccttccagtcaaggaatgtgttgagcaagaagcttatggtgaagaaggaggtaactgaataattagagtgcggtcatcatagatattggcaactgaattgcagaattagtacaagtgtgtgtttctcttgaatagtctgctttagtaatattcatcagttattttaggatgtgtcacttcataatgttctgtttcaagataaaatttgtattttaacagagctttttatttatgtccacacttgcctatctgtggctttttccttgaacctctattgtttgtcaccatggctcttacataacttaattctaatgatcttctttcccaatttctgatcaggaatctctggacaacattaccctcttctcaatcattacagtgatgtcattcttcctcttggccccagtaaccttgctaacagagggtgtcaaagtcactccgacagttctgcagtctgctgtgagcaccttgatatttaattatagacaaattgctccttacatattgtttggtgcaatttttgactattttctttcttatgtagggtctgaacttaaaacagatatacacaaggtcactgattgctgcgttctgtttccatgcataccaacaggtcagccatctaattgattttctaaaaatagcttggccttttgaaatctctggatgcgcttgttcatttcagatagattctatgtgctgaatacattacagttgttacattgatgaatcatcatacatgtgcaaagcccatgtcttgctgatctcacataatttcttgaaggtgtcgtacatgatcctggcaagagtgtcccctgttactcactcggtgggtaactgtgtcaagcgagtggtggtcattgtgacatccgttctgttcttccgcacccctgtttcgcctatcaactctctgggtaagaatcattttctgttcacttctgtatcaaattgactgcatcgcacctcctttacatatccaaatatttgcgccctgcaggaaccggagtcgctcttgccggagttttcctgtactcacaattgaagcggcttaaacccaagcccaagactgcctgattgtgtcttggtatctatcgtgaagaaccgtagaagcattgccacacgccatcggaatgagtgccttagcttagaatgatccttggagaagctccatccagtgaactgatgctgctgtgtgtatcgtttgtagttgagttactagcgtgctaatcgtggcaaggtttttgtgtcttctttaccaccttatgcttgaacagtcaattattttgttgtatcaataaatttcgtgcaatataacgttatattatctctgtttctttatggaagtattactatccttgtattataaattaaaaagtaaatttcataaaactatagatatcttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0297400, RefSeq:Os09g0297400