Os09g0297100

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Revision as of 07:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0297100| Description = Similar to CROC-1-like protein (Fragment)| Version = NM_001069339.1 GI:115478417 GeneID:4346652| Length = 2988 bp| ...")
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Gene Name

Os09g0297100

Description

Similar to CROC-1-like protein (Fragment)

Version

NM_001069339.1 GI:115478417 GeneID:4346652

Length

2988 bp

Definition

Oryza sativa Japonica Group Os09g0297100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7770869..7773856

Sequence Coding Region

7771197..7771337,7771432..7771557,7771968..7772107,7773761..7773800

Expression

GEO Profiles:Os09g0297100

Genome Context

<gbrowseImage1> name=NC_008402:7770869..7773856 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:7770869..7773856 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgctggggagctccggcgccggatcgagcgtcgtcgttccgcgaaacttcaggttgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtccacataatagtgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggactacccagagaagccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatcatgagactggagcggttgactcgaggaagtttggtgttctagcaaactggcagcgcgagtacaccatggagactatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaagttggtgcaacctccagaagggacgttcttctag</cdnaseq>

Protein Sequence

<aaseq>MTLGSSGAGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDAD DIYMRSWTGTIIGPHNSVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMSCVNHETGA VDSRKFGVLANWQREYTMETILTQLKKEMATPQNRKLVQPPEGTFF</aaseq>

Gene Sequence

<dnaseqindica>2520..2660#2300..2425#1750..1889#57..96#ctcgtcaatccccaaaccctcctcctcctctccggcgatccacccatcgatcggcgatgacgctggggagctccggcgccggatcgagcgtcgtcggtgagcgatcgatcgaatccccccttcccttcttcccttcccccccttttctcgcgagtgcctagggccttcggatcggaggaggctgaggaggagaatccacgcgggtttcgctccgttccgcgcctcgtaactttggcgctgtgtcccgccatggctgtgctgtgctcgatgtggttggtgatcaggcgagacgccgacgcgttggtttgtttgttggaattagcgatctgcggtttttgtaccatatgggttccatccatctggtgatttagcttggtttgcatgcgtgcagcggtcatgggatctctctagatggcctggtttgctcggtttgcgaatttatttacggcatgttgatgatggtttggctttggcagtaaatttgtggtatccttagaggatgaaattgttccctttgctaacaagtggtcctttagctgcttgggtgttacaaggggagagctgagaagtgcctgggaccattagctctaagtggactatgaggcataattatcagcgggattattagttgtatcacttgactttaagtggaaatgtttttaatgaagatagatatgctcttctgatcatggtttccttagatagctgttgtataggcctcatcgcggctggatgagactgtgttggtttctttttgctggatctgttttttcgtgtgggcatgcaggttgtgtgctttataaaaacctgggtattgaatgctatattgcgtttttcttgcagtgttaagttcggtcttctcttaatattttctttcctagatggaattaaatagcttttagcgtctccggtttggaggtttgaacgtaatgcctttttgtgttctaatcacaagttggaactttgcaccattcaaacaattgtactgaaattgtttcacctcggcggccttgtgattcagactacttgccaaagatcatgttatttgttcattatattccactgatgaactttgtgtgtgaagttacactatttctgtctactattctgttttgagataatacattgtataatcaatctcaagtcaaagttcaggcttcaatctgagaagtcaaaaccatgattgcccgttttagagccactgcactctgagtgtctgtgcactagataaaacaatgacttgcgtttaacaaatgccgacatatctgttctgggtgtatggtattcgagtcacaagattcttcatcgtcttgcaaacagaacaatacatttttttttttttgcattgttgttaaccccccacgccaatggcagatatattcaattttgttttgcttcacaagaaaacaacagctgagctgcagtgctcttgtccctcattcgggagaatgatacattggtgttattctttttttttcttcagaaaatagtaatcatctacaaatccactaaattctgaaactgggaatcgatattgccattttatttatctcggttgtagccgtctttgctctgtaattcagtacttgatgcatgggtatgaaaacttctcatgctgtttctaggttgattttgtcttcttttgttctgtgcaatgatatcaccattatgcaatttctatataagtagatttaagagggtaactgcattatatcctgaggagttgactaatatgtaaaatgcctgcagttccgcgaaacttcaggttgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtccacataatgtgagattatggactctatcctgatacactcacaatatatcatattactcatatggaaaatcttctcctgtggctttatatctttaccgtcgtactgtgcttcatcttgggtttttattagtggagaagatgtctttattagtggaaaaaggctatttgaatggcattaagatatgtgtgacaaggttatggaattatatttctgggaagaggcacacttgagcttttcaacttccttatgttgaccataaaggcaggagaatcactactacaagctaaaacttacatatattagctctagatgctttctcatgtttgacagtttgagagtccacctagctcctcttgtactgcttatataaaatattattaacttttactaagtgtctgtttcttcctcaatctggcagagtgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggactacccagagaagccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatcatgagactggagcggtattctctcctcccaaatgtagatgccaagtttatttattttgtgcaggctactccctctgattgatattcatttggtgctgtgatcctataggttgactcgaggaagtttggtgttctagcaaactggcagcgcgagtacaccatggagactatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaagttggtgcaacctccagaagggacgttcttctagaggagtatttacctcctggctcatctccagaattcagattcaacatcatcaacttgtatttatctggctcccgcgcttaattgttttctagttcaatttgatatatgccctgctttctgtgtaccaacaaccgagtccaactttgcgcctcgtgattcgtcgggtggctgttgattaaggagatgagtcggatgaaaagggtgatctggtttggcaaaattggcagtatgagggatgtaaaattggaaacagatgctgtgtcaagaaatgtgtaactgcaggtcctttatattgcctacatgaatatagtccgtgcatgcttttcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0297100, RefSeq:Os09g0297100