Os09g0309700

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Revision as of 07:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0309700| Description = Similar to Transcriptional factor TINY| Version = NM_001069370.1 GI:115478479 GeneID:4346686| Length = 3337 bp| Def...")
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Gene Name

Os09g0309700

Description

Similar to Transcriptional factor TINY

Version

NM_001069370.1 GI:115478479 GeneID:4346686

Length

3337 bp

Definition

Oryza sativa Japonica Group Os09g0309700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:8765726..8769062

Sequence Coding Region

8766038..8766994

Expression

GEO Profiles:Os09g0309700

Genome Context

<gbrowseImage1> name=NC_008402:8765726..8769062 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:8765726..8769062 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggtgccctcttcacggaaagtccgtgttttctgctctgatcctgatgccactgactcctctgatgaagatgaccagaataagaaggaaaggagattttcaagggaaatactaattccaatggaaaactccaaggcatccaaacctgttaagacccttgttcaatgtggcacaaagactgtaaaggattccgagaaggaaccgacgagcaaatacaggggtgtgcgccggcgggcgtggggcaaatgggctgcagaaatacgtgaccctgtgcgaaaatcaaggaaatggattggcacatttaacagtgaggaggaggccgctgcggcatatcttgcacaatcaaaccagttccatgaagagttgatggccttgaaaatccaatcttctgtatcagagcaggaagatttgtcaagctctgttactatatcctgcgtgtcctcatctcagtcatgtgaccagaagattcaggcaaagccacaagaacacaagagagtgtcagtggtggttaaccgtgagaccgttgagcagaagtttaaggcacagccacaagctcagaagattaaggcacagccagaagtgcagaagagagtgtcagtgaagattagccatgagactgaggatgagcacttgctgaacttgccgtccacgcctaaaggcaaagagatttcgatgggcgctgttcttggcaggatagatgagattcctgtgagcaactgtgtgggccatattgatgaatttccacctgatgatttcactaggcttgcagatgcgttcccagttagtgattttatcggcatggcagatgtgccactgggcgatgattacattggccttgcagacatcagccacctgccgctgcctatcacagatctgaagttcgacctcaatgcagaactcaactgggacgggttcgactttgcttcattggaacaagaactcaactgtctttga</cdnaseq>

Protein Sequence

<aaseq>MMVPSSRKVRVFCSDPDATDSSDEDDQNKKERRFSREILIPMEN SKASKPVKTLVQCGTKTVKDSEKEPTSKYRGVRRRAWGKWAAEIRDPVRKSRKWIGTF NSEEEAAAAYLAQSNQFHEELMALKIQSSVSEQEDLSSSVTISCVSSSQSCDQKIQAK PQEHKRVSVVVNRETVEQKFKAQPQAQKIKAQPEVQKRVSVKISHETEDEHLLNLPST PKGKEISMGAVLGRIDEIPVSNCVGHIDEFPPDDFTRLADAFPVSDFIGMADVPLGDD YIGLADISHLPLPITDLKFDLNAELNWDGFDFASLEQELNCL</aaseq>

Gene Sequence

<dnaseqindica>2069..3025#acacatcacacgtttcgcctccctcctccgctcgtcttcttcattctctctccttcgcttcgcttccaaatcgcccgcaatttctcccccaaaaacctcccctccccccaccaccaccattaataaacccctcctcctcctcctcttcttcctcctccgcctcgccatctcaccgccaccgcctcctcactcactcacttcctgccacgtcattcgcgccatcgatcgcgtcgtcgcctcagctgcctgtaagtggtgaggtgacgacctctgctgtctcctttcttgttctttgttcttcctccaatatcggatcgtctcgggttggggttggggttggctcggcgtggatcggtgtgttgttgttggtggcgacgtgtttcttcttcctcgttgaaagattggatttttttttttgggttggtattattgcggagatatttcgtgggtgggttcggtttgtttctatcttttttttttcttttttacctttccttttttttgtgggggtttgtggggggattttttctgggggttgtgattaatcagctgccaatctaatctggggggattgtgctgggtgtgaatacttgaattttggatggaaagttcttggattcttagctttcgcgtcctctgtttcctttcttgatctcctcttttttttcttttctttttctttttactttccttgatgatgaattcgaattcgcttgtgatgttgatcgatccgcttgtggtgatgatgctgggaggagcagagaggaagaggaggagtagagctcgtcgtctccgccgccgcagctggtgctcgctgttgatttatgtcgcctgctctacccccgtttctccatggttctgagctccagtcgccgccaacggtttcttcctgctcccttctcatcctcctccttcaaaattggtatacgaggggcgcaagaacacagcaaaatcccttcacgatctccaggtaacccatgcatttctctgtttggtttaatccgattcgtttgaattgaaaccaatattgtccattatctcggtaaataaagtcagtcgtgtgtgcatgttgttgtttctctatttctttctaggacagcatatattatatgtactaatatgtttattaagattgtcttccttgcatgatggaagattgttttttcagttgctagttgcatatctagaggagggcatggtgggtggatatattattcttttaattcaatgagtatatatgactgcataactgtgttaagaatgttgatgcaagtttggactggttacccagctgagctgcttaataaggattgatttgttgatcttgtcatagtcataacgtttcactatttttagatgcaaagatggatacgcttgcttgatcattctttgctctaataatgaccaatgtgccttctttgcttgttggtttcagatttggatttggggtgaaatactttggctttcttcatttagactggtgacaattgaagatagcccccaaattgccttaagatttggtaagtgttggctgtttttaaggcaatatattatcagcaaataactgctcttccgtattataactttcctagtttatttgtactacttaaagagaaccttttcaagactaacttacagggcatcatcacaaaacctctttttcctttttattctttcaggtttggcttgagtggatcaagtacagaatccgaacttttgcaacctgacattcttctagttcacaaagtcggccagatttgagatttctctcggacatctctgtacacacaggagctctcttttgctccagttttaaacagaagttggacaaaggctctgtttctggttttttgagtttctgcgataagcttagagagcagacaacaaacttttgtcctgattcatctaaactcttacctggtaggtgaacatcttttctgttttgcttctttgcaatttcatatccttttatgagcatatttgacacatcctcagccttctctgcagactgcaatcaaggccaattgtaatccaataatctctgatcttgttctggttgcacgttgagatgatggtgccctcttcacggaaagtccgtgttttctgctctgatcctgatgccactgactcctctgatgaagatgaccagaataagaaggaaaggagattttcaagggaaatactaattccaatggaaaactccaaggcatccaaacctgttaagacccttgttcaatgtggcacaaagactgtaaaggattccgagaaggaaccgacgagcaaatacaggggtgtgcgccggcgggcgtggggcaaatgggctgcagaaatacgtgaccctgtgcgaaaatcaaggaaatggattggcacatttaacagtgaggaggaggccgctgcggcatatcttgcacaatcaaaccagttccatgaagagttgatggccttgaaaatccaatcttctgtatcagagcaggaagatttgtcaagctctgttactatatcctgcgtgtcctcatctcagtcatgtgaccagaagattcaggcaaagccacaagaacacaagagagtgtcagtggtggttaaccgtgagaccgttgagcagaagtttaaggcacagccacaagctcagaagattaaggcacagccagaagtgcagaagagagtgtcagtgaagattagccatgagactgaggatgagcacttgctgaacttgccgtccacgcctaaaggcaaagagatttcgatgggcgctgttcttggcaggatagatgagattcctgtgagcaactgtgtgggccatattgatgaatttccacctgatgatttcactaggcttgcagatgcgttcccagttagtgattttatcggcatggcagatgtgccactgggcgatgattacattggccttgcagacatcagccacctgccgctgcctatcacagatctgaagttcgacctcaatgcagaactcaactgggacgggttcgactttgcttcattggaacaagaactcaactgtctttgatggcttgaatcctgttctatgtgaaaacctcttgttgattgaattgagtgcaggaggtagattcaggtatccatctttcacattgctggcaggccgagtgtatgatctggagattttcatctccaattttgccggaaaattgtacagtccccctacagcaaacaaatgagtaccgcagtatttatgtatatgttcaccaatctcaaaaatgttaatgagattgtggtgacagaccgtccttgatctcagtttggttgtgtatttgttggacgccattattatatttgttaattttgatattgttcttgtgat</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0309700, RefSeq:Os09g0309700