Os09g0314900

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Revision as of 07:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0314900| Description = Proteasome maturation factor UMP1 family protein| Version = NM_001069377.1 GI:115478493 GeneID:4346694| Length = 491...")
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Gene Name

Os09g0314900

Description

Proteasome maturation factor UMP1 family protein

Version

NM_001069377.1 GI:115478493 GeneID:4346694

Length

4912 bp

Definition

Oryza sativa Japonica Group Os09g0314900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9202135..9207046

Sequence Coding Region

9202135..9202260,9202352..9202452,9204228..9204325,9204989..9205051,9206440..9206621
,9206774..9207046

Expression

GEO Profiles:Os09g0314900

Genome Context

<gbrowseImage1> name=NC_008402:9202135..9207046 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:9202135..9207046 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcggcagcatcgtgaagaaggaggtcggcgagaaccacgacgtgctccgcttcggcttcaacaacagcgtcaagggcgacctcgcgccgcagcacccgatccaggccaccgtccacaaggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccgctttcaacatccgcaaggatctcgatgcccaaatcctctccaagttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgactggttccttggatgatttcgggtttgaagattatctcaacttgccccaagattctgacagcttccatgctccagacatgcaccacggaatggaggttctccttgagataggtatatgcaagaaatacattcataccagatctagaggcgatagtggaggccgcggggtgcggttgccaaatctagccccctctcgttcggatctggcttgtccggcgctggaggctgaccctcaagccaccgccagcggagaggtgacgacgcggacgtggaggtggcagggtgaggactatggaagtccaacgcggcgtggcgatgcaagaggtcgatgcaggcaggtcgatgcgggtggcaccagcggtagcagaaggctggcatggacggcatcgggaggttggcgcgacaacgacaaagaagccagcctgactgatggcgtgaaggtcgacgcacgcgccaacggcaaagaagctagcctgactgatggcatggaggtcaacacagtgatgacagggagtccaatgatggtggtgtgtgccactaggcatgctgagactgactga</cdnaseq>

Protein Sequence

<aaseq>MASGSIVKKEVGENHDVLRFGFNNSVKGDLAPQHPIQATVHKEA KFWADKKRFGAEAIYGSAFNIRKDLDAQILSKFQRPPGALPSSMLGYEALTGSLDDFG FEDYLNLPQDSDSFHAPDMHHGMEVLLEIGICKKYIHTRSRGDSGGRGVRLPNLAPSR SDLACPALEADPQATASGEVTTRTWRWQGEDYGSPTRRGDARGRCRQVDAGGTSGSRR LAWTASGGWRDNDKEASLTDGVKVDARANGKEASLTDGMEVNTVMTGSPMMVVCATRH AETD</aaseq>

Gene Sequence

<dnaseqindica>1..126#218..318#2094..2191#2855..2917#4306..4487#4640..4912#atggcgagcggcagcatcgtgaagaaggaggtcggcgagaaccacgacgtgctccgcttcggcttcaacaacagcgtcaagggcgacctcgcgccgcagcacccgatccaggccaccgtccacaaggtacccgtcgctgcttcccctctcctcgccccctcgaaaaccctaacgcgctgaatccgggtgattggtggtggggcttgcccgcgcgcaggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccgctttcaacatccgcaaggatctcgatgcccaaatcctctccaagtaatttcactatcctatccccccatatgatttcgctgggaaaacgatttgttcgagtaaataatcacttgcggttcatgttaacattagataactgtgtcggtattacatagcatatattggaattgttagggtcaatgacaattttgggtggaattcctcaaactcaaatggccttattgtgggacgagatatgtttctttgaatttgatgatggcatgtattccccctgtgtttgtctgttagataaccctcgcagtacataaaaaaaaacctcgcatttacataattttctgtaggcttcaattaaaaaataaactcaaggtctcgaaggatcaaattaaatatgtacaaatgaaaaaccccaaacaaccagatgttgcgtaatcattagcatgcaaatcaaacaggaaattaggggatttcgtgggttagggaaaataatctcacccgatcgctcgctggctcattgttgcttctcatgagacaccagccatcgcacttgctgtgtttgtgcgtctacccgaggacagtacaaggcaaagagacaaaccaacaaacaagttagtttcaggttgcgataacaggcatgttagctgctgttgtgtcgggtactcggatgttgtttatgggttgagcaagagagcaaataatggaccaattatgtctgagtattggtgtcaaaagacaaggttctctggtgtcacccatgagagaatagaatagagcacttggaacaggccaaagccattggtatcatgtgacaccactgctataacgttggatccacccctattttgtgtgtctagttgtaaatccgttagctctttgcatttactgcaactattttgctcttattgtcgtatgcatcaagtgtcagtgatgttatgttttgtggtcatcagcggtattctgctaactgttactccctccattctaaaatataagtcacaaccacctttaacctaaagaccaaaaaacaataatcacctcattgtttgaatcatcataataaatactaatgcatgcaccctatagaattagagatcttgagggtgaaggatttaagaaataataatttagtggagaggaggtgctagttaacagcctcatcttttggcttatgcttatgtttataagccaaaaattgaattttcaaccttaaatttggaattgattttggggttttttcatcatagtttattttccagcctttgtcttttagatcgctaaaaacacggatataaaaaatttatttgcaaattattttctgtttacaaatatgccgtttcacttattctgtcaataagcgaaacgatgggggtcctaatttcaatgcatgcatgcacaccttgtattatgaaacgtgaaaaaaagtagttgtgccgtatattttggaatggaggtagtagtttgcaagttatttctgaaatttgttctcgtggctatgtgcagtattttgagcactgtttttaaggtgtttaattaggtcctgtttcttcaagagcatttccacaaatcaaatattaggactgctaagaatgtattaatgctttgagtatgctaacatggatggaatgtctggattccttggtctggtgaatacacaatcatatcttgaggttgctcttgtttgtctctccgtctctccgatgtagtaacaactaacaactagcacatcagcgcaactgtgcaaataagggaaaaacagcgtgcgcaactcatgcccaggctaacattaaagatgttttggttgatgatttatctgtttgcaggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgactggttccttggatgatttcgggtttgaagattatctcaactgtaaggcttgttgtcctttgatttcctatgaatcttcttgctggcctttcacatttacgtgcaactatttgctcaccaacttttgctgatttattagctgcatgtttgatgcttatgttcttcattggaattatggaatccagtgctatcaagttctcattacctttatattaattctagtttttttattttagtagaccaaaaccatgtagtcttatgattccttgggagtttagaagttcttgggaaaccaagggtcatgaaatgatacttgtttttcatttttcatacttctagtcggtacatcttgataaaattttgctattaggatatacttggaggaatgtataataattatcacaaagtggttattttattctgtcctcatgatatgatatattaacagcaaagtacatattttgctttgtcatccaagcttggttggccttactttgcatggcaaaacatacatctcatcaccattttcagtgatgagatgtatcaccagaaatacagcctctatagactatatatatttcagtcccacttctgccctgggaacattttttttttcttatttacactcgctgagtgttcttcctgttgttggaaatgttacttagccttgtgttaattttctttttactttggatcatgttgcagtgccccaagattctgacagcttccatgctccagacatgcaccacggaatggaggttctccttggtttgtcaaagggaccgatttgccctagtttcaattgatttcacaaaatgtatttctcgtcttgcactgttctcctcattcaatatctatgtcgctctttagactgagatttcgatgcttgttttggttcataaccacacttgtgacgagattccttatccatcatgtagacctcacatgtcattgagataaaagagtgtgacaagagtgtctcattctagctaaagtgtggctccaattttgttagccacacattaggcaagttggtcaaaacattgtgtcaaccttgcataaatagaaatactcaaccaaacagtccattacgcttatacaccgtcaaatcaaaatgggacagtttcagacttggccgtggcttccatccatcgtcaatgcttcaagtgtggggacttcttcaacagccccatccattgtcgtaccatgtggttgatctaatataaaggcattccgagttgagctatttaaacaacccaactaaaatagtactccctccatctacttttgatagacatatttccaaatctgaaaaatttacttttgatagccatatttcaattcaatcatctatcctcttaatgactttctatgatttaatgcgtgactctccattcttccacacaagattggctacatgggcatcgagaaatgtaaatattaatgaatcgcttgtttacgaggaataattagtagcatgtttaaatggatgataagtagaattatttttccttggtcattgtgtcaagataaaatatgactatcaaaagtagatggagggaatagtattggtaaatctctctctgcgagtaaagttcggcggcatgagttcttgctttctttggaccctcgttggtacatgcaaatacagagcagcgagtaatgcaattctcgttccctcattgcatgaactacgttccaaaatcatctcgatcggtgcaggtgtaggcctaacctttctgaaaaatcatttgcgtctctgaaatactccactccaggcagcacccggcaaatgctagttaggtccatcatagttttcacttgaaaagaagcctgccgaaggttccaataatttgaacaagcaaacagaacactggaattgcatgtatgtctcaaaatcgcagagtattgactcctttttcggacacgttttatttgtcagttgcgactaaaaaggacacatagaagaatggatgtgctaaaaatgatcgtccgtcatatgaaagatacatttaatgtgaagagcacttggggcacattgagttgtttagagattttgcataacacaaggaaatatttagtggaaatcatcaaataaatgaaaacccatgaaagccatacttacatattctctaaattcaagaaaaatttgctagagataggtatatgcaagaaatacattcataccagatctagaggcgatagtggaggccgcggggtgcggttgccaaatctagccccctctcgttcggatctggcttgtccggcgctggaggctgaccctcaagccaccgccagcggagaggtgacgacgcggacgtggaggtggcagggtgaggtaggaaggacgcgacgacacgccatcgatggagggcatgcccgcgcggtgccatcggtggagaagggaggaagtggggcaccggctaggagtggccagtggcggcggtaggctggcgtggtgatgctaggaggcccacccgatggtggtaggactatggaagtccaacgcggcgtggcgatgcaagaggtcgatgcaggcaggtcgatgcgggtggcaccagcggtagcagaaggctggcatggacggcatcgggaggttggcgcgacaacgacaaagaagccagcctgactgatggcgtgaaggtcgacgcacgcgccaacggcaaagaagctagcctgactgatggcatggaggtcaacacagtgatgacagggagtccaatgatggtggtgtgtgccactaggcatgctgagactgactga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0314900, RefSeq:Os09g0314900