Os09g0322200

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Revision as of 07:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0322200| Description = Similar to Nudix hydrolase 20, chloroplast precursor (EC 3.6.1.-) (AtNUDT20)| Version = NM_001069397.1 GI:115478533 G...")
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Gene Name

Os09g0322200

Description

Similar to Nudix hydrolase 20, chloroplast precursor (EC 3.6.1.-) (AtNUDT20)

Version

NM_001069397.1 GI:115478533 GeneID:4346716

Length

4274 bp

Definition

Oryza sativa Japonica Group Os09g0322200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9945269..9949542

Sequence Coding Region

9945719..9945788,9945916..9946036,9946156..9946271,9946378..9946457,9947349..9947474
,9947943..9947993

Expression

GEO Profiles:Os09g0322200

Genome Context

<gbrowseImage1> name=NC_008402:9945269..9949542 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:9945269..9949542 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatgcctgtgtacttctctctggaacgtgctgctgccccctactttggcttatggagttcatatgaatgggtatgttgagaaggagggccagaaatttctttggattgctaagagaagtgatacgaagcagacctttccaggaatgcttgatcatcttgttgcaggtggcctgccatatggaatctcctgtgaagagaatgttatcaaggaatgtgaagaggaagcaggaatcccaagatccatttcaagcaatgctacctctgttggagcgatctcttacatggatattgaagggtttagatacaaaagggatgttctcttctgttatgaccttaaacttcctccagattttgttcctaataatgaagatggagaggttggtagcttcagattaatccctgtaccacatgctgcaaatattatccggaggacacattttttcaagccaaattgcaaccttgtgattattgacttcctcttccgtcatgggtatataaacccagattaccatggctacctaaagctgctgcaaagcttgaggagaggtgattgctcgtag</cdnaseq>

Protein Sequence

<aaseq>MACLCTSLWNVLLPPTLAYGVHMNGYVEKEGQKFLWIAKRSDTK QTFPGMLDHLVAGGLPYGISCEENVIKECEEEAGIPRSISSNATSVGAISYMDIEGFR YKRDVLFCYDLKLPPDFVPNNEDGEVGSFRLIPVPHAANIIRRTHFFKPNCNLVIIDF LFRHGYINPDYHGYLKLLQSLRRGDCS</aaseq>

Gene Sequence

<dnaseqindica>3755..3824#3507..3627#3272..3387#3086..3165#2069..2194#1550..1600#gttattgacatttttttcccgttcaaaaaaaaatattgacatttttttccccaactgccggcgatatggccgctacggccgcctcctccctgtccgccgccgccgccgccgctcgccggagcttcccctcccgcctccgactcctagcacgccgccgccgcctcccgttctcgtccaccgcctccttctccgccgctgcgccaccggctgccgcggcgagcttcggctgggaggacgccctccgggtcgccgccgacgaccggcggggcgacgagtccgacctctccgggtactcccggaaggtcgacacctgcaaccgaggaatggtgagtttcttgcccctaccgtgtcaaccgcgcgcgcttgaacgcctcgggtgtgaatttcgttggggtttcgcaggacaagaagggggagttcgtggcgttcatggtggaggatcaggttgtggggtatatccaccaagggtgagtgcagttattatgttccaatttggggctaatttgttcataattcgaattctgtcctccaaattttgcgaatcgtgaggaacagccattcagtcaactgcatgtcccggtgtcagtataatccttgatcgggtagaactctgcttttcagcctatgaccaacccagccaaacaggatataaatctctctgaaaacgagggtataaatatgacagatgcggtggaacatgcgtaatcgtaactagtctcattgcagcctaaaatattatggttgatctgcattattgtttaaataatgcggtcagtcacactatctgattatggctcgtttatttgaactggctgcatcttttttcaagatttaagttgcatacttgtacaaatttcgcatctctctgcgtctagttatttttgtccacatagtaagtgtaaatgtatgttttgtattgaaatttcgagattcttgtctgtatgaggtaagctcataacatgacgagcacaaagttttattatttgggattcagtgtctgcattggcagtgtggactatgaggatattttactacttattgcaattacaatattcatgattcagtgtatattttagggtgagattggttttacaaggtgcttatctcattcattccaatttcagttttgttgaacatctaagagacttccgtgatgtttttaccattgcctcgggcagcaatggaagcaataatgttgaacatgtgactctccattcatctctaaggactccagatgaacgaacaaatgctgttggaagtgtcataagaagtctaggagatctgattccaggtattcgaaatgaggtactcaccacaattcagtatccaagtcattgattctttaatgaacaagcttgattttaaattctgatgcatttattgatttgctgaatgttggatcctacatttttcagtagaattgccacagtagtttttttaaatattcttcttgttttattaggccttattggagatttcacattttctctctataatctcgttctaataatatgctcaatctaacagctctatccaataacatcatcttatggcatgcctgtgtacttctctctggaacgtgctgctgccccctactttggtataaaggttctctgtcatgcttccttatttttaaaaggaaatactccctccgttttttaatagatgacgccgttgactttttctcatatgtttgaccattcgtcttattcaaaaaatttacgtaattataatttattttgttatgggttgttttatcactcatagtactttaagtgtggtttatatcttatacatttgcataaaatttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggaggtagtatattctatgccaatagtgtcacctatatacatatgttagtgaattatagggaagtgttctacatccaaaatagctgcttactgctaatcatatctgccatgtggctatttactggctttctttttttggtaattgatatggtccaagtgttcaatccttatcgatgagatgttatgtatattgtcaggcttatggagttcatatgaatgggtatgttgagaaggagggccagaaatttctttggattgctaagagaagtgatacgaagcagacctttccaggaatgcttgatcatcttgttgcaggtggcctggtgtgcatttccatcactctctttttttggtccatcttattagcagtaattatttttcagttatcatcttgttgtagtaaattatgaaactttaaaacaattgcatagggccttttgatgccttcattccttcgtaaaaaattaaaggggaactgtgcacatatcagaccgtaacattttaagcttctagttgattattgtcagattcagcctaggattgacttggctgaagtgtctggttagtggtcactgggtaaccagttgttccacttggtcagcgaccaaacttcattttccactataatatttataatgcatataatctccaaaaaatttaatctatgataacatttcattctcttctgaacgttgtggtcataaccagctacatcagatatcaggaacagaaagtctcagcatactttgggcaacataaacatccatgttcttgctggattttgttttacgtgcaaatgatgtgcctcaaatggccttaaactcttggccatatgattcttttgctcctaatgttttggggcatcccgacaattatatacctggtaatctgatgttcttggtaaagcttagatgagaaatttcagctggtttatggggacaataaattgtaatatcatacttcttatttatactgatgtaggctgcatgaacaggtggccactttagggttcatataaaatttctctaaagggttttaatctgtcttgtatgtcaaaaagtcaattcaatcaaacaggtagggatgctttagtctcaaatgtgtggctcagttcttctctctgacctgttttttttttttttctgttgtgaaagtgaatagctagctattaacttacattgattggtacactgattccccttgaaaacttttagccatatggaatctcctgtgaagagaatgttatcaaggaatgtgaagaggaagcaggaatcccaagatccatttcaagcaagtaatatgaccgctgttgcctgaaaaattataaatttctctgtgatcttcatcgtgtttgccgtgcaagtacccatagtctaactcataattaccatgtttgctagtgctacctctgttggagcgatctcttacatggatattgaagggtttagatacaaaagggatgttctcttctgttatgaccttaaacttcctccagattttgttcctaataatgaaggtaaacattcccatttggcagaacaaaaacttgaccccaaccatgctatacttctctgttctctataaatggtactctagcatgaaaatatttaatgaatcttctaccaactcttgcagatggagaggttggtagcttcagattaatccctgtaccacatgctgcaaatattatccggaggacacattttttcaagccaaattgcaaccttgtgattattgacttcctcttccgtcatgggtatcacgtgcatattatattcttcttttgttcatcgcaaccaaaaaatgaaattccttgttctatgagtagtttgctttcattaacaaaagtttctcacatgctgtcttgataatctcccttttaggtatataaacccagattaccatggctacctaaagctgctgcaaagcttgaggagaggtgattgctcgtagtgctgccttcagttcagactgattatgaggattttaaattcaagactttactctgtcaagtgctttcatctcctccagtgatcactgtttgtaatcacatttgtcgagcattggttcagattcttgaaaaccttaacctccatggctccatatgcatacaatctgaagcatcaacggtggctcggattatccaactagcaagtgcaaatgtttgcttgatatttgatttttgccaaacaagttcgggtgtttgatttgcttcagcgaatttgtgatgatggacaccaggcgttgcggaaggtggatcacatggcatggaaccatggatggatagttcgtcccttatcctgtctctttttttttttttctggaaaacagaggatagtactggatttgagtatgaacataaatagtgagggaatatgaattcatatatggaggaaatatatg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0322200, RefSeq:Os09g0322200