Os09g0325220

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Revision as of 07:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0325220| Description = Cyclin-like F-box domain containing protein| Version = NM_001188844.1 GI:297726818 GeneID:9267126| Length = 3486 bp|...")
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Gene Name

Os09g0325220

Description

Cyclin-like F-box domain containing protein

Version

NM_001188844.1 GI:297726818 GeneID:9267126

Length

3486 bp

Definition

Oryza sativa Japonica Group Os09g0325220, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:10086681..10090166

Sequence Coding Region

10086681..10086759,10087518..10087624,10088593..10089420,10089517..10089669,10089756..10090166

Expression

GEO Profiles:Os09g0325220

Genome Context

<gbrowseImage1> name=NC_008402:10086681..10090166 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:10086681..10090166 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagattggggtacgtgctgctgaagcgcttgcagcgagagcgtcgtcgtcgtcgtcgacgacatgccctagtccccgatgagtctattgcctcaccagagaaacgaaagggctcatgttatcaacaagatgacagtcctcgcagtagcaaaaagatgagatattcaggtccagaccttcctgaggaaatgtggcagcatatacattcccttatgccaatgaaagacgctgcccgtgttgcctgcttgtcttctgcctttctatactcttggagaaaccgtcccaaactctcctttagtactgaaacaatgggtatcgttgaaggtacaacggatttcatcagaaaaattgatcgcgttatgaaaaaacactcaggcattggtgtgaaggctcttacgattgagttcaatggtctcttcagtaccaaagcacgcagttacctcgaaagatggcttcaaattgctgttactccaaggatcgaagagctcagcctctcgatgtccaagggaaagtcatattatgactttccttgctcacttctatctgatgggagtggaagctcgattcggcttcttgatctttaccgctgtacctttcgccccactgcggagattggttgctttcaaagcttgacgaggctgcatctggagtatgtgagtatcacgggggatgagttggggtgcgttttttccacttcgtttgctttggagtggttgaaactccggctttgccgtcatataaaatacatgaagttgccttgtgtgctacagcggctgacctatgtggaagtgcgtggatgctccaggctgagagtaatagagaacaaagctccaaaccttcacagtttgcacattttttatcaaccttatcaccctataaaactctcctttggagagtcatctctggtgaagaacctaaggattgggtattcctctgttctcgatcatgcttgcgcggagctaccatatatttttccaaacctcgaaactcttaccataggcttgttgggtgagatggtcaatacaccaatggtgcctaacactttcctccttctcaagtacttgtgcattactctttctgcagtaactctctctccatcatatgattatttgtctctggtttcctttctcgatgcctgcccttccttggacactttcatcgtggatgtatctgcaaaacacccgaagaacgattcaattttcgagaacccctcacatctaaggcagttgccagagcaacgccatgacaacctccggaatgtgaagatcactggattccgctccgcaaagagcttgttcgagctaacatatcatattctcgagaatacatcagttgaatgtcttacattggacaccagttttgagtctttcagatgttctcccggcaaacctggtagatgcttgcaaacgtcaaaggatgatcccatggaagcctctaaagcactcttcgctatcagaacatacatcgagggaaaagttccctccacggttagactaaatgtggttgagccttgcagccgttgccatgttatggaaccttttactgtcgaaagtaacagcggaaatgaaatgcagtaa</cdnaseq>

Protein Sequence

<aaseq>MRLGYVLLKRLQRERRRRRRRHALVPDESIASPEKRKGSCYQQD DSPRSSKKMRYSGPDLPEEMWQHIHSLMPMKDAARVACLSSAFLYSWRNRPKLSFSTE TMGIVEGTTDFIRKIDRVMKKHSGIGVKALTIEFNGLFSTKARSYLERWLQIAVTPRI EELSLSMSKGKSYYDFPCSLLSDGSGSSIRLLDLYRCTFRPTAEIGCFQSLTRLHLEY VSITGDELGCVFSTSFALEWLKLRLCRHIKYMKLPCVLQRLTYVEVRGCSRLRVIENK APNLHSLHIFYQPYHPIKLSFGESSLVKNLRIGYSSVLDHACAELPYIFPNLETLTIG LLGEMVNTPMVPNTFLLLKYLCITLSAVTLSPSYDYLSLVSFLDACPSLDTFIVDVSA KHPKNDSIFENPSHLRQLPEQRHDNLRNVKITGFRSAKSLFELTYHILENTSVECLTL DTSFESFRCSPGKPGRCLQTSKDDPMEASKALFAIRTYIEGKVPSTVRLNVVEPCSRC HVMEPFTVESNSGNEMQ</aaseq>

Gene Sequence

<dnaseqindica>1..79#838..944#1913..2740#2837..2989#3076..3486#atgagattggggtacgtgctgctgaagcgcttgcagcgagagcgtcgtcgtcgtcgtcgacgacatgccctagtccccggtaagtcgccttttcctgtcctcagattgtcttctctgctattcatgtcaggatgcaatgagttctgccattcatgtgacaatgcaaattattcatgccggcctcattgttatgcttatgcttataagcccaaatttgaatttaggactttatttttatgttgatttttcttaatcatagtttattttacgacatttacttttgagttgctaaagacacctatataaaagttttatttacaaatgattttttatttgctaataagcgattcggataagcatatgaataagctaaacaatggggtttctcatctattgcttgttcagagaatgtacttcagctttgtgcagcaagagtaggatttcggttttgtagtttcctctccctttttcgagtaggtgaaactgattcgtttagattgttagtttcaacccgtataatctttatgtttgagattcctttagattgttagtttcgaccatatgatctttttgcaagtacggagtacctttttatgtttgagcaggtaagttctccggttgagcacttgagctcctgtttacccccagtctgcatctgttcatagaagagattgtaattaagaagaccaaataatgatgcttatctactaaaggttttgagagtaggaatcagcatccactcaaacactagaccaagcatgtattgtttgcatcataatgcttaatttcttgtttctcctgttgacgcgtgtaattcttaacctttagttgttgcagatgagtctattgcctcaccagagaaacgaaagggctcatgttatcaacaagatgacagtcctcgcagtagcaaaaagatgagatattcaggtccagaccttcctgaggtatgacacacagtcctggtagtggaagacttacagagttacagtgcaaatagtgcgtaaaaattggtgtaactattccaactaaaacagaaatttgtgtacatatttcactttgtttatttttgtactcgtcatagactcatagatgtaccaagtatgtcttgttcgactgcggtaattgcagatgacatcatgcttagcttacctgctgataaccttgactaaaacaaatgtcttgtatctggcccattctacctgcagaatctccttccatgggtacttaatgctggaaaataaacctatcattaattcattatactgtcacccaatagtaacttgtttggaataggtgtatgaccgtatgagttaaatcagagtcgtgggaagcacacaaattcagactgctgtattaggtttgtttggtatcttaggataactaggctatattacactgttgaactttatggaaaaacgtatcagtgcttcctccgcacatgtttacttggttcacactttctattagaacattgatttcatgttatccttcctaattcttatacaagtgacggataggattgatccacatattattttaggaccacaatcatttgtcaagtatgttgcctaagtcatgttgcaagtttgcaacttgcaatcaggggaggaaacagggggaggcgagcagtggcttggcctcccccatgccttcaaatttcacactatttttttactgtagctttagcaaattttgaaaaaattaacactattgcccctctccaacataatgtttttaaggtttcagaaggctctgtcttgcaataccatccatagcagtaaaatgtgtacaagctagtaataactaataacccttctctacacaatgctcaatttaactaccgcagttacattccagttgttttagccttcacttttccaatgtaatggctctctcatgcttgtgcatgcaggaaatgtggcagcatatacattcccttatgccaatgaaagacgctgcccgtgttgcctgcttgtcttctgcctttctatactcttggagaaaccgtcccaaactctcctttagtactgaaacaatgggtatcgttgaaggtacaacggatttcatcagaaaaattgatcgcgttatgaaaaaacactcaggcattggtgtgaaggctcttacgattgagttcaatggtctcttcagtaccaaagcacgcagttacctcgaaagatggcttcaaattgctgttactccaaggatcgaagagctcagcctctcgatgtccaagggaaagtcatattatgactttccttgctcacttctatctgatgggagtggaagctcgattcggcttcttgatctttaccgctgtacctttcgccccactgcggagattggttgctttcaaagcttgacgaggctgcatctggagtatgtgagtatcacgggggatgagttggggtgcgttttttccacttcgtttgctttggagtggttgaaactccggctttgccgtcatataaaatacatgaagttgccttgtgtgctacagcggctgacctatgtggaagtgcgtggatgctccaggctgagagtaatagagaacaaagctccaaaccttcacagtttgcacattttttatcaaccttatcaccctataaaactctcctttggagagtcatctctggtgaagaacctaaggattgggtattcctctgttctcgatcatgcttgcgcggagctaccatatatttttccaaacctcgaaactcttaccataggcttgttgggtgaggtatgctttctcggtggctcttaaacttttttttatatatttatgttcacgcattttaacatgatatttagtcaatctgaagcatcttttctgcagatggtcaatacaccaatggtgcctaacactttcctccttctcaagtacttgtgcattactctttctgcagtaactctctctccatcatatgattatttgtctctggtttcctttctcgatgcctgcccttccttggacactttcatcgtggatgtaagccacaccttcaccctgtaaacttgtctagttagtactactttctggaaccaattaattcaactatgacttgtcattttcaggtatctgcaaaacacccgaagaacgattcaattttcgagaacccctcacatctaaggcagttgccagagcaacgccatgacaacctccggaatgtgaagatcactggattccgctccgcaaagagcttgttcgagctaacatatcatattctcgagaatacatcagttgaatgtcttacattggacaccagttttgagtctttcagatgttctcccggcaaacctggtagatgcttgcaaacgtcaaaggatgatcccatggaagcctctaaagcactcttcgctatcagaacatacatcgagggaaaagttccctccacggttagactaaatgtggttgagccttgcagccgttgccatgttatggaaccttttactgtcgaaagtaacagcggaaatgaaatgcagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0325220, RefSeq:Os09g0325220