Os09g0331180

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Revision as of 07:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0331180| Description = Ankyrin repeat containing protein| Version = NM_001188851.1 GI:297726832 GeneID:9270257| Length = 4614 bp| Definiti...")
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Gene Name

Os09g0331180

Description

Ankyrin repeat containing protein

Version

NM_001188851.1 GI:297726832 GeneID:9270257

Length

4614 bp

Definition

Oryza sativa Japonica Group Os09g0331180, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:10446875..10451488

Sequence Coding Region

10446875..10447916,10448911..10449113,10449441..10449715,10451143..10451488

Expression

GEO Profiles:Os09g0331180

Genome Context

<gbrowseImage1> name=NC_008402:10446875..10451488 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:10446875..10451488 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccaaactgatggtggccacagcccatggcgactgccagcagctgaaggatgtcgtgaacaaggaggatgctgccatgatggtgctggtgatggcgtcaagcaacggcacgccggcttccgccgcggcggcaagtcctccggtggccatgcatccgctgctgcacgcctcagcttcctccggggattggaagggtgtgaattttcttctcaacagggaagaagcatatgcagattcatctgttcagcccagtaaaaagtttctgaagtccctagaagcatgcatccccggcaactgcaccaacggaaggttgccgactccgccgcaagcttctaatgacatagaagaaggtgcaaacatgccattgttgttgtctcccgagtcgcttctggagggtgtcaccatcgagggagacactgcgctccatgtggtggccacacatggggatggccacaactacttgaaatgtgttgacacaatctgtgccaagggcaagcacctcctgtttaagccaaacaataaggatgatacacccttgcactgtgctgccagggctgggaatcacgaaatggtcaataagcttattggtctagctattggacctagtagaagggaggaaagtgttgacagcatagcgaataacctgatccttagaagtgataatctttctacagagacattcttgagcgatgatgtccgtgttgcagataatcttacagtcggagatagtattagcataagtgaggacaatgtccacaggggagtggaatatctcagaatggaaaatgacagtaatgaaacggccttgcatgcggcaattcgcattggtcatagtcctatagtaacggagctattgacatatgattctgaattggcgctatttccgcaagaaggcacatcaccattgtacctagctatcttgctgaagcaatttgacatcgcgcggacattataccagatgagtagacaaaatattctctcatattctgggccaagtggacaaaatgcattgcatgttgcagttctccgaagcagagttgtgagagaagtaatccaagctaatggagctccactgtaccagccagacatctatgggatgttccccatacatattgctgcctcagttggtgagaaacggaccatcgagatttttgttcagaagtatcccagcagtgctggcctgcgcgataaaagaggaagaacatttcttcatgttgctgttgagaacaggagagtgaatagcaccgaagaaatggtacgctttgtattgacacaagctggtgctatgaatgacagttgccgccacgatcactttagagaaaaacacaaagacactcacaacctaaaatcagatagtgaaagcaaagaattagaaaagctaaaggacgcaacggaaacaatggccattggctcagttctaatagcaactgtgacgttcggtgcaactttcgcattgcccggaggttacagagcagatgaccactcaaacggtggcacaccaacacttgttgggagttactcatgcacttccctggtagcacagcacggaggaaaaggcggcccgccacttcgctgctcgctctctggtcaggacttactggcgagattgctcctcaccttgggcaaccaagccgccgccttctctctctcccaccgccatcctcgcttcgacccgctgaaattccccaccctcggccttcaatccactgatccgtcgccgcctttgagtccgccatctccccacgaccccatttcacccctcctcgacgcccaatcgtcgccggagccaaaacccccaaattccagtcaccgccgtccgccgttgcccgtcggcccgaatccctcgtcgccaccaaggtag</cdnaseq>

Protein Sequence

<aaseq>MDAKLMVATAHGDCQQLKDVVNKEDAAMMVLVMASSNGTPASAA AASPPVAMHPLLHASASSGDWKGVNFLLNREEAYADSSVQPSKKFLKSLEACIPGNCT NGRLPTPPQASNDIEEGANMPLLLSPESLLEGVTIEGDTALHVVATHGDGHNYLKCVD TICAKGKHLLFKPNNKDDTPLHCAARAGNHEMVNKLIGLAIGPSRREESVDSIANNLI LRSDNLSTETFLSDDVRVADNLTVGDSISISEDNVHRGVEYLRMENDSNETALHAAIR IGHSPIVTELLTYDSELALFPQEGTSPLYLAILLKQFDIARTLYQMSRQNILSYSGPS GQNALHVAVLRSRVVREVIQANGAPLYQPDIYGMFPIHIAASVGEKRTIEIFVQKYPS SAGLRDKRGRTFLHVAVENRRVNSTEEMVRFVLTQAGAMNDSCRHDHFREKHKDTHNL KSDSESKELEKLKDATETMAIGSVLIATVTFGATFALPGGYRADDHSNGGTPTLVGSY SCTSLVAQHGGKGGPPLRCSLSGQDLLARLLLTLGNQAAAFSLSHRHPRFDPLKFPTL GLQSTDPSPPLSPPSPHDPISPLLDAQSSPEPKPPNSSHRRPPLPVGPNPSSPPR</aaseq>

Gene Sequence

<dnaseqindica>1..1042#2037..2239#2567..2841#4269..4614#atggacgccaaactgatggtggccacagcccatggcgactgccagcagctgaaggatgtcgtgaacaaggaggatgctgccatgatggtgctggtgatggcgtcaagcaacggcacgccggcttccgccgcggcggcaagtcctccggtggccatgcatccgctgctgcacgcctcagcttcctccggggattggaagggtgtgaattttcttctcaacagggaagaagcatatgcagattcatctgttcagcccagtaaaaagtttctgaagtccctagaagcatgcatccccggcaactgcaccaacggaaggttgccgactccgccgcaagcttctaatgacatagaagaaggtgcaaacatgccattgttgttgtctcccgagtcgcttctggagggtgtcaccatcgagggagacactgcgctccatgtggtggccacacatggggatggccacaactacttgaaatgtgttgacacaatctgtgccaagggcaagcacctcctgtttaagccaaacaataaggatgatacacccttgcactgtgctgccagggctgggaatcacgaaatggtcaataagcttattggtctagctattggacctagtagaagggaggaaagtgttgacagcatagcgaataacctgatccttagaagtgataatctttctacagagacattcttgagcgatgatgtccgtgttgcagataatcttacagtcggagatagtattagcataagtgaggacaatgtccacaggggagtggaatatctcagaatggaaaatgacagtaatgaaacggccttgcatgcggcaattcgcattggtcatagtcctatagtaacggagctattgacatatgattctgaattggcgctatttccgcaagaaggcacatcaccattgtacctagctatcttgctgaagcaatttgacatcgcgcggacattataccagatgagtagacaaaatattctctcatattctgggccaagtggacaaaatgcattgcatgttgcagttctccgaagcagaggtaatcgacaagttttagatgcccattctatttgtttactatgttggttcttttttacttgatgatttggccaatgacacaaacctccgatggacaatcatcattatttttaaactgcatatttataaaaattattacaactataacatatgaaagtttttttcatgaaaaatctacttctacgacttttacatgtcaaatccttctatttgtaccgttattaatgattaaaaccttcgaggtagtatctacgaggggatgacggtgttaaaaacatgcctatctctagtgctagaaaagacagcatagcagtactatgacaaacaccaaatatgtaacatcactacatacgagggattttcctgcctaccctggtacctacaggggttaaattaagtagagaactagcacatatgaaactcaatatgtgttggtgttgttataaatatgacaattgtaaacttatacatatacctgaatcatgtttgcatattgtctatcatacggtgagatgtctgtgaaatgaaccgagagatttttatacaagtttagacccttctcagagtaatgtacccctatatcatgttgaataagattactagatgagttatcaaacgtatttaaaaaaagtcaacagtgtcataaattaaaaacagaggtaatatatatgcatttctgcatgaacttaagaacacaggaattagtccaattcattacttggatgctcacaagaaactcatgcggattttagagggaaaatgttgttagaatatctttctttcttgtttcaacgagcatgtaccaacacaaagttaccatttacaggaatgaccaaacagctgttggggtggaacaagaaccttactatgcaaggggacaaaaacggtagtactcctcttcactttgcctcgtctcgtacgattgacaacaacaattggaactatccccaccgtatatatccgctggtttcgtgttccatgtccacgtcatcgagttgtgagagaagtaatccaagctaatggagctccactgtaccagccagacatctatgggatgttccccatacatattgctgcctcagttggtgagaaacggaccatcgagatttttgttcagaagtatcccagcagtgctggcctgcgcgataaaagaggaagaacatttcttcatgttgctgttgagaacaggagagtgaatgtagtcggctatgcttgcagaaatcggtcgtaagcatggatcctgaatatgcaagacaataatgggaacactgcgctgcacctagctgtcgaggctgcgaatcttcaaatgttttgttcgctatttggcaatcggcaagtgcaactaaatgtagtaaatgtaaaaggccaaactcctagagatatatcacatgatcaaattcctccagggctacataataatcaggtaatttaaattcttcttttagaagtactactttcgagataaacgataattgaatactgatttcacttcctaacaaaattgattagtttccttatttttcagagcaccgaagaaatggtacgctttgtattgacacaagctggtgctatgaatgacagttgccgccacgatcactttagagaaaaacacaaagacactcacaacctaaaatcagatagtgaaagcaaagaattagaaaagctaaaggacgcaacggaaacaatggccattggctcagttctaatagcaactgtgacgttcggtgcaactttcgcattgcccggaggttacagagcagatgaccactcaaacggtggcacaccaacacttgttgggaggtatgcttttgattcgttcatgatagccaatacgctcgctttcattttctccttgatttccacaactagtctcttgtattctggaagtccgttgattaacaagcaaagccgtgcagtcttcttagaatcagccttctactttatgaagacttcgatcacatgtttggtcgctacctttacacttggtatgtatatggtgctatctccggttgctcgtagaactgccattgtcgtatgtgccttaagtccccttgtagtgctgtgcaacagcattcgctactgggtaaaacggctggttctggcgccatcgtgtattgtcagaatggggccaatttggacattgggatttcttgcaatcaccattgtattttattcgataatggaattttggccgctaatattcatctttgcttgggcggcacatggaaggaaccacacctagcttctgaaacatagccagtcaacgtgggtatgaaacagatgatcagcactatccactgtgtatatatgttctttcttctggacgtgagtcgtgtctgactcctagaatttggcttcgtctgaattatactgttctcaagcgtgtgctctcttgagtgttttcttatgtcattcatatctgaggccctttgggcccataataagtactcctatgcggctatgatgtaaacgtcacgctttttcattgaggtgtaaacaaacattgtacttctaattgaaattttagagaatgcatgtaactgttaggcactgtgttagcctactgtaaaatgtttaattgaactgttgtcatttgtgaaatatgtataacttcttttggaaatggatagcaaaaccaatgaactaggtgaaaccccgcgcattgctgcgggaatttagtatcataacaataaaaaaaataatgtgtaagatagctagataacatcagattaagtaaattaatgtggtttatgataatttaaatttaaatagtatgtagaatggtgattcaaacataaaaagtaaagtgttatgactttatggaagaagaaaaatagggagatagtttgaaccgtaaattaatcatctaaaggttaaaaacaattgatgtgatatgacttaattagagaaaaaaaaggagaaaaataatttggaccatagattaatcatttaaacactaactaactaaggatgaactatataagtaaatagaatatcataaaacataataaagatatgcgttgaaacattatgtgaattatgttggatgataatttcacatgtttgtatttgaaaagctcataaattataaaactataaagatatagtatgtttacatgatgtttaaatgtgatgattgttagtagatgatgatgtggcatcatctttgcacgttaagcttaagaagttagtgggggataagtttatagtgagataggattaagtagttactcatgcacttccctggtagcacagcacggaggaaaaggcggcccgccacttcgctgctcgctctctggtcaggacttactggcgagattgctcctcaccttgggcaaccaagccgccgccttctctctctcccaccgccatcctcgcttcgacccgctgaaattccccaccctcggccttcaatccactgatccgtcgccgcctttgagtccgccatctccccacgaccccatttcacccctcctcgacgcccaatcgtcgccggagccaaaacccccaaattccagtcaccgccgtccgccgttgcccgtcggcccgaatccctcgtcgccaccaaggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0331180, RefSeq:Os09g0331180