Os09g0339800

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Revision as of 07:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0339800| Description = Glycerophosphoryl diester phosphodiesterase family protein| Version = NM_001069454.2 GI:297609281 GeneID:4346782| Le...")
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Gene Name

Os09g0339800

Description

Glycerophosphoryl diester phosphodiesterase family protein

Version

NM_001069454.2 GI:297609281 GeneID:4346782

Length

6472 bp

Definition

Oryza sativa Japonica Group Os09g0339800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:10964957..10971428

Sequence Coding Region

10964957..10965267,10965750..10965870,10967349..10967396,10967493..10967632,10967856..10968140
,10969525..10970023,10970119..10970231,10970753..10970974,10971257..10971428

Expression

GEO Profiles:Os09g0339800

Genome Context

<gbrowseImage1> name=NC_008402:10964957..10971428 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:10964957..10971428 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgtcgaggattaccggctccctccccatggtgcggtcctactgcttctgcctcctgctactctcaaccatcgtcgccgtcaccgtcgccgttgccgcggaggagctccccccggcgccaaccaccttcaaaaccttgaacggcaagctcgatctagctcctcttaatcgtaatgctcctcttgttattgctaaaggtggattttcgggagtttttcctgattccagtgaatatgccttcgcttttgcctcctcgctccacataagcttgtggtgtgacgtgcaactgacgaaagatggcgttggtatttgcctccgagatttacttatgcagaactgcaccgatatcactgaaatttatccagaggggatgaaggcatatctaatcaatgtaacacaatcaatttattcccgtaccccgaggttcgactccaacttcgacatcctttctgtcaccggcttcatatccttgatcaaaccatcttctacttggttgaatgtcgagcatgacattttctacagagagcatggtttgaacatgacaaattacattctttcaatacagaagcttggctctgtgaagtacatctcatcacctgaactaggtttcctgcaaagtttatcgggaggcattaatcgtgaagtgaatctagtgttctgctttcttgataaagccctgtctgatccttcaacaaataaaacatataactatatgttgagtaacttgacatttattaagacaattgcttcaggtataatggttcccaaaaactatatatggccagtaacaagtgataattatattcagcttcacacacagattgtccaagaagctcacaatgcaggtttagaaatatatgcgtctgatttttcaaacgatggaatttttccctacaactacagttatgatcctttgggggaatatctgtcatttgtcagcgacggtggctttagtgttgatggtgtattaacagatttcccacttactgcatcagaggctattgggaatccattaattatctcacataatggtggtagtggagattatccgggttgtacggatctggcctatgagaatgcagttagggatggtgccgatgttattgactgttccattcaaatgaccaaagatggaattcctatatgcatgagttccattgacctgcttgctactacagatgtccagcaatcaaagttctgttcacttctttctgtcattccagaaattcagtcaaaaaagggaatattcacatttaacctcacttgggatgacatcaacattttgagacccaaaatatcttccccgctgagtgattatgttatgttacggaatccaaggtacacaaatcatggcaagtttttgaagttatctgaatttctgacatatgcgaaggacaaggagttgtctggcatcatgatcaccatcgagaatgccgcatttatggcagcatcattaggatttgatgttgttgatcttcatcagaaaacacagtacaaacttgtttacacgctcccgttaaacattgaggatgcttctgattcatcggtggcagagatcaataaattcgctgaagctgttatgttgataggaaatccgttgaactcttgtacgggtctgggagatggcaagcctcggtccatgaaggctgtcgaaatcggcggtctcgtgcaaacactccaagacaaagccaggcggccggctcgggcaccagcacttgtgctcaaaccatcggacgtcgttgagccgcctctcccggctgcggctgcggctgcggctgcggctgccgtgcccaagactactggctactcatcaccacgttctgatgctcctcctcctgctgctgctgtaactgcaattagcagcacaggcattttgctgggaatggtttgggtatctctgctcatctga</cdnaseq>

Protein Sequence

<aaseq>MLSRITGSLPMVRSYCFCLLLLSTIVAVTVAVAAEELPPAPTTF KTLNGKLDLAPLNRNAPLVIAKGGFSGVFPDSSEYAFAFASSLHISLWCDVQLTKDGV GICLRDLLMQNCTDITEIYPEGMKAYLINVTQSIYSRTPRFDSNFDILSVTGFISLIK PSSTWLNVEHDIFYREHGLNMTNYILSIQKLGSVKYISSPELGFLQSLSGGINREVNL VFCFLDKALSDPSTNKTYNYMLSNLTFIKTIASGIMVPKNYIWPVTSDNYIQLHTQIV QEAHNAGLEIYASDFSNDGIFPYNYSYDPLGEYLSFVSDGGFSVDGVLTDFPLTASEA IGNPLIISHNGGSGDYPGCTDLAYENAVRDGADVIDCSIQMTKDGIPICMSSIDLLAT TDVQQSKFCSLLSVIPEIQSKKGIFTFNLTWDDINILRPKISSPLSDYVMLRNPRYTN HGKFLKLSEFLTYAKDKELSGIMITIENAAFMAASLGFDVVDLHQKTQYKLVYTLPLN IEDASDSSVAEINKFAEAVMLIGNPLNSCTGLGDGKPRSMKAVEIGGLVQTLQDKARR PARAPALVLKPSDVVEPPLPAAAAAAAAAAVPKTTGYSSPRSDAPPPAAAVTAISSTG ILLGMVWVSLLI</aaseq>

Gene Sequence

<dnaseqindica>6162..6472#5559..5679#4033..4080#3797..3936#3289..3573#1406..1904#1198..1310#455..676#1..172#atgttgtcgaggattaccggctccctccccatggtgcggtcctactgcttctgcctcctgctactctcaaccatcgtcgccgtcaccgtcgccgttgccgcggaggagctccccccggcgccaaccaccttcaaaaccttgaacggcaagctcgatctagctcctcttaatcgttatgtgtatatatatatagagagagagatagaggagagagaggaaaggagtatttcccggctctgttcatgtcaggactgacctgaattctgaatttctgatttctgaaccagctctagtttagtttgggttagttcttgcagcgagtcgttcgatcggttttattggaaatcttgacgggaattacatacagtcaattttttcgtcccatgcatcagtacttgcagtagcatatgcatggccgcccgaaattaaaatttaatttgttggttgtgtgcaggtaatgctcctcttgttattgctaaaggtggattttcgggagtttttcctgattccagtgaatatgccttcgcttttgcctcctcgctccacataagcttgtggtgtgacgtgcaactgacgaaagatggcgttggtatttgcctccgagatttacttatgcagaactgcaccgatatcactgaaatttatccagaggggatgaaggcatatctaatcaatggtgcacagaaaaccggatggttacctgtggactataacatggcttcgctgagaaacgttacttgtgagttgcaacaaatcagtttaatcaaccctttgtttttcttttttctttttttgaaaggaaggcttgcaataactttgccttataccatatatatagtttcaactcctttttattagaaactcgatcatgctgcttgctcgctgcattgccattaaatgcatgaatggatactaccgccatgcatgtcaatgtgatcgtgaaataatatcctcttgcatctgaccaatatatatatatatatatatatatatatgtattccctttcctttaaaaaaagggaaaaaatgatggatacgtactgcattcctatcttgtctctgcagttgccggccggctagagcgaccaaaaatggatgttatcctagtgccttttgttttcttggttctttgacactttttagttgtattgagcatctggaattattgtcttgtactcactgtccaccattggacagtaacacaatcaatttattcccgtaccccgaggttcgactccaacttcgacatcctttctgtcaccggcttcatatccttgatcaaaccatcttctacttggttgaatgtcgaggttgagttcactgttctttcaaactaaacctggaaattaactatagctattttttgtccttcagaagataactctcttttcatttctttctgcagcatgacattttctacagagagcatggtttgaacatgacaaattacattctttcaatacagaagcttggctctgtgaagtacatctcatcacctgaactaggtttcctgcaaagtttatcgggaggcattaatcgtgaagtgaatctagtgttctgctttcttgataaagccctgtctgatccttcaacaaataaaacatataactatatgttgagtaacttgacatttattaagacaattgcttcaggtataatggttcccaaaaactatatatggccagtaacaagtgataattatattcagcttcacacacagattgtccaagaagctcacaatgcaggtttagaaatatatgcgtctgatttttcaaacgatggaatttttccctacaactacagttatgatcctttgggggaatatctgtcatttgtcagcgacggtggctttagtgttgatggtgtattaacagatttcccacttactgcatcagaggctattggtatgtcgttgtactttgtagatttaaatttagtttccgtactagtgtaattttatttgacagctgaatgctgtcaattgtactggagacaaactcaaaataaataatatgcttccaagctgtaccaaaactagattaaattttctgatatcaagcaatcaataataataaacgatttttttagatgcttgcaaatggtgttttttttttgcggggatgcaattggtgtatatattaaacgtgctttaaaatgaattcatgttatttactttttggttggggccttgaagcatatattgctggcagaaataaattaactcttgtaattaatgttaagcgggtgtcaaattgatcttatagacatctatcgaagggtaatataatactccacaatcgtaatgtgaactctccattatacattattcaataacggatccactgttggggcttgctggtacttaagccctagctccatccctttaatttcctctaactagtgactaatgactcaaattaattagaaattaatgtaaatatagcagtacggcaaagacagttagctgaagcgctcatttcccaaattacgttgcaagtgtgaaatatgctctgctgagtgaccataccaactagctagttcataggtttctatggatatattagtacagctgcaaattaaaatgaagaaaggtacggtctgtcttttcttcttatgtgttttgggtttcatctaaaatactaagttgatatatgtgttagtttgtgtcaatcacaactattttttgtacataagcccctcctcaatttacatcgtagattcaccactgacattgctcctatatatataatgtatatcatcaacgtttgtattgtgcataaaaaaatgataacatctataagttaatttatttcccaattggtagataggataattgctttttttccctcaattatgctagcctgtgaaccatgaggttggttatctcttttggaacttccattatatttttctgtatgtacatgcacaaagtcataagtttatgagcttcttatttcgtgctaattaattggttgcagataacacacttatcctagctagcatgtgaactactatgagaaaaaattgcggcttaatgatttgcttttgctctcatcattcactgtgtgttacttgttatttattattattgggtacgaaaataagaatttgactttgtattaatcatttgaatccgcatttttcacagattgtttcagtaatttgaacacaagtaggaaaacggatcacggtatgctacatttcggtgcaaattaacctacctcccggtgctgctgcagtcacattaaatggattgctatatataattaatttttttcttcttaacagggaatccattaattatctcacataatggtggtagtggagattatccgggttgtacggatctggcctatgagaatgcagttagggatggtgccgatgttattgactgttccattcaaatgaccaaagatggaattcctatatgcatgagttccattgacctgcttgctactacagatgtccagcaatcaaagttctgttcacttctttctgtcattccagaaattcagtcaaaaaagggaatattcacatttaacctcacttgggatgacatcaacattttgagacgtacgtgactttcgttttctttttttttattagaatcaataatattgtcttacattgagatggatgtgtttttaacactgttcgttcgttctctttagtgtggcgagaaacattgtttccttgataaaagggcctgctgtagactgacttggtcatttcatacacgcgagcgatactatacaggagaaaattaattcatcgtgtgttcttattttacctgcagccaaaatatcttccccgctgagtgattatgttatgttacggaatccaaggtacacaaatcatggcaagtttttgaagttatctgaatttctgacatatgcgaaggacaaggagttgtctggcatcatgatcaccatcgaggtacgtctttttctctctctatataggagagtgtgtgtatatactatatatatataggaatatataatcgatcaaccttgatttgtgaacctgcagaatgccgcatttatggcagcatcattaggatttgatgttgttgatcttgtaactactgccttgagtcatgctggatataacaacactaccaccaccaccggtggagaagtgctttttagtcccggttcgtaacccccctatagtcccggttttcaaaccgggactaccaatccgggactaaagatcgctatctttagtcccgggtgaaaaaaccgggactaaagatcgatctttagtcccggttgatgacaccaaccgggactaaagatttagtcccggttggtgtcatcaaccgggactaaagagagggtagcggcagtccatcagctagtccttttttcttttttattttctcccgaatcgagtggtatgcatatcatcaaatcaaaccccaaatccacatcacaactccacagcacgattcacagattcaccacaaattcattcacaatatccattcacatattcattcacaacatcacaaatatattcacaatattgatttaaaggttcattgacaacatcgagtcgcatactcattcacaacatcacagattcattcacaatatcgattcatagattcattcacagatcaaaacatccaaaccacaaattaaaaaaaatcaaaaaaaaaaatcgactcaccggccggcctcccatcccgccgccggccggccacccatctcgccgcttcccctccggccggatctgggggaggggagggcgaggccgccggcgaccggcctccatcccgccggcctgcgccgggccgccgccggccgtcctccatcccgccgcttcccctctggccggatctggaggaggggagggcgaggctgccggcgaccggcctccatcccgccggcccacgccgggccgccgccgcccgtcctccatcccgctggcccgcgcctggccgcaatcccgccgccgccggccggccgccgccagccccagcccgcgcctggccgccgccagcccgcgcccggccgcctccatcccgcccccgccggccggccgccgccagcccgcgcccatcccccatcccgccgccgccgtcggggaggaggagagggggtgagagaagaggaaggggagaggatgaagataaggaaggagaagaaaaagagataaggatgggctacgcatgcgcttgtgcgtgggctggtgcgtacgctttattcccgattgatattatcaaccgggagtaaagatcatctttagtcccggttggtgttaccaaccgggagtaaagatatcggggggcctgacaaggcctgacagatttagaaccgggactaaagatcatttttagtcccggttggtaacaccaaccgagactaaagatcaaatatgcccgctgtagccaccaaccgggactaaagatcatctttagtcccggtttttagtggaaccgagactattgtggatttcgggcgaccgaccaaagatggtttctccaccagtgcacgaacaaggaggttatgatccagtctagacacagtgctgttctggtcaaactgaagcatcagaaaacacagtacaaacttgtttacacgctcccgttaaacattgaggatgcttctgattcatcggtggcagagatcaataaattcgctgaagctgttatgttgataggaaatccgtgtttgttgagagcagtggtttcattgtaaggaaaaccaatctcgtgaaagaactgcagtctgcggggcggttagctgtgtatgcccaggtattccggaatgagtttgtatcatcaccctgggatttcttctcagatgaaacaacggtggaaatcaataactacgttcttctctggttcatattgatggcatcataactgatttccccaagacagtcagaagatacaaaagtaagtaagcagtaccattatactatatatatatttaatttatttgttatgtatatggttcgtcatataatatatatatatatatatatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtatgcatgtatgtatatatatccagacctaatttcaagttgaaataaattagctaaaaggaaagaaaaaaaaattaacaactataattaaacctggatatggttgcatcaataattaatttttactggcagtgaactcttgtacgggtctgggagatggcaagcctcggtccatgaaggctgtcgaaatcggcggtctcgtgcaaacactccaagacaaagccaggcggccggctcgggcaccagcacttgtgctcaaaccatcggacgtcgttgagccgcctctcccggctgcggctgcggctgcggctgcggctgccgtgcccaagactactggctactcatcaccacgttctgatgctcctcctcctgctgctgctgtaactgcaattagcagcacaggcattttgctgggaatggtttgggtatctctgctcatctga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0339800, RefSeq:Os09g0339800