Os09g0346700

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Revision as of 07:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0346700| Description = Protein of unknown function DUF810 family protein| Version = NM_001069476.1 GI:115478694 GeneID:4346805| Length = 62...")
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Gene Name

Os09g0346700

Description

Protein of unknown function DUF810 family protein

Version

NM_001069476.1 GI:115478694 GeneID:4346805

Length

6211 bp

Definition

Oryza sativa Japonica Group Os09g0346700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:11422250..11428460

Sequence Coding Region

11422733..11423658,11423750..11423939,11424482..11424925,11425251..11426114,11427831..11428364

Expression

GEO Profiles:Os09g0346700

Genome Context

<gbrowseImage1> name=NC_008402:11422250..11428460 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:11422250..11428460 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctcgcctcttccgcgagtcccgccgcgactcctcctcctccaacggctcctccgccgccgccgccgccacggcctccaccggcggcctcccctccccgttccccgacctcggcgtccccctctccgccgccgacctccgcgaggccgcctacgaggtgctcgtcgcctcgtcccgcaccacgggagggaagccgctcacctacatcccccaggcggcggcatcggcgggtggtggtggtgggccggcgtccccggcctccgcctcgtctctctcctccgcgaacgcctcctcctccccgtcgctccagcgctcgctcacctccgccgcggcgagcaagatgaagaaggcgctcgggctgaggtcgtcggcgtcgtccaagggtgggagccccgggagcggcggcggcgggaagtcggtgccgccgcggcggccggcgaccgtcggggagctgatgcgcgtgcagatgcgggtctcggagcccgccgacgccaggatccggaggggcctcctccgcatcgccgcgagtcagcttggcaggcgtgctgaatctatggtcttgcccttagaattcctacagcagttcaaggcatcagatatccctgatcctcaagagtacgaggcatggcagagtaggaacttgaagcttcttgaggctggtttgcttgttcacccacttgttccattgaacaaatcagatgtttctgcacaacgactgcggcaaattatacgtggagcatacgatagaccacttgaaactgggaaaaactctgagtcaatgcaggtcctacgtagtgctgtcatgtcccttgctggtaggtctgatgatgggacttctgacggatgccactgggctgatggtttccccttgaatctccatctataccagatgttggtagaagcttgctttgataatgatgatggcactgttgttgatgagattgatgaggtgatggagctcttaaagaagacctggggtattctgggaattaaccagatgcttcacaacctttgctttgcttgggcattgttcaaccattttgttatgtccgggcaagtagatattgagttgctctctgctgcggagaatcagttggccgaagttgcaaaggatgccaaaaccacaaaagatccaaattacagcaaagtgttgagttcaactttaagctcaataatgggttggacagagaaaagacttctggcttaccatgagaccttcaatacaagtaacattgagtccatgcaaggtattgtgtcaattggagtgtcagctgcaagggttcttgttgaagatatatcccatgaataccgtcggaggaggaaagaagagactgacgtagctcgcagcaggatagagacctacataaggtcttcactccgtacagcttttgctcaaagaatggaagaagcagattccaagcggtcatcaagaaaccctacccctgttctgtctatccttgcaaaggacattggtgacctagcaattaaggagaaaaatttgtacagcccaattttaaagacatggcatccccttgcttcaggcgttgctgttgccacccttcattcttgctttggaaatgagctgaaacagttcatagctggacttacagagctgaccccagatacggttcaagtgcttaaggctgctgataaattagagaaggatcttgttaatattgcagttgaagattctgtggatagtgatgatggaggcaagtcattaatcagagagatgccaccatatgaagctgaaaatgcaattgctaacctggtgaaagtttggattaaagaaaggatagacaggctcaagggatgggttgatcggactttgaaacaagagacttggaatccagctgccaacagagagaatattgctccctcttgtgtggagatgcttcggatggttggtgaaacattagatgcatttttccaattgcccattccaatgcatccagttcttcttcctgacctgatgtttggacttgatagaagcctacagctttttgtgtctaaagcaaaatctggctgtggaacaaggaattcttttatgccccaactacctccgttgacacgatgcgaggtaggatcgaatatattgttcaagaaaaaggaaaagccacagaatccacagtaccgaggatcacaaaatggaacaaccaatggcgctgatcccttagcccttcctcaactctgtgtacgcttgaatacgcttcaattcgtgcgaggtgaactcgagaacttagagaagaagataaaaacaggcttgcggaatgtcgagtcagctcaggcagatgttaccgatggattggacatcaaatttgagctttgtcagacagcctgtcaagagggcattcagcagttatgtgagacaactgcatataaggtgacattctatgatttggggcacgttctctgggatatcctttatattggtgacattgcatcaagtaggatcgagatattgttgagagaactcgaccctatactagagaccatatctggtatggtgcataacaaagtgcggaaccgtgctataaccgcattgatgaaagccacttttgatgggttcttgctggtgcttcttgctggtgggcctttgcgtgctttcacccgtcaagactcccagataatagaggatgacttcaaggcccttaaagacctgtttttagcagatggtgatggtttgccagaggaattggtcgataaggcatcctcccaggtcaagaatgtcctacccctcctacgaacagactccgagagccttattgaccgattcaaacgcatgatggctgagtctaatcgatctggagccaagaataggttaccattgccaccaacaacagggcactggagcccgaacgaacccaacacagtcctgcgagttctgtgctaccgttatgatgagacggctaccaagttcctaaagaaaacctataatcttcccaagaagatctga</cdnaseq>

Protein Sequence

<aaseq>MSRLFRESRRDSSSSNGSSAAAAATASTGGLPSPFPDLGVPLSA ADLREAAYEVLVASSRTTGGKPLTYIPQAAASAGGGGGPASPASASSLSSANASSSPS LQRSLTSAAASKMKKALGLRSSASSKGGSPGSGGGGKSVPPRRPATVGELMRVQMRVS EPADARIRRGLLRIAASQLGRRAESMVLPLEFLQQFKASDIPDPQEYEAWQSRNLKLL EAGLLVHPLVPLNKSDVSAQRLRQIIRGAYDRPLETGKNSESMQVLRSAVMSLAGRSD DGTSDGCHWADGFPLNLHLYQMLVEACFDNDDGTVVDEIDEVMELLKKTWGILGINQM LHNLCFAWALFNHFVMSGQVDIELLSAAENQLAEVAKDAKTTKDPNYSKVLSSTLSSI MGWTEKRLLAYHETFNTSNIESMQGIVSIGVSAARVLVEDISHEYRRRRKEETDVARS RIETYIRSSLRTAFAQRMEEADSKRSSRNPTPVLSILAKDIGDLAIKEKNLYSPILKT WHPLASGVAVATLHSCFGNELKQFIAGLTELTPDTVQVLKAADKLEKDLVNIAVEDSV DSDDGGKSLIREMPPYEAENAIANLVKVWIKERIDRLKGWVDRTLKQETWNPAANREN IAPSCVEMLRMVGETLDAFFQLPIPMHPVLLPDLMFGLDRSLQLFVSKAKSGCGTRNS FMPQLPPLTRCEVGSNILFKKKEKPQNPQYRGSQNGTTNGADPLALPQLCVRLNTLQF VRGELENLEKKIKTGLRNVESAQADVTDGLDIKFELCQTACQEGIQQLCETTAYKVTF YDLGHVLWDILYIGDIASSRIEILLRELDPILETISGMVHNKVRNRAITALMKATFDG FLLVLLAGGPLRAFTRQDSQIIEDDFKALKDLFLADGDGLPEELVDKASSQVKNVLPL LRTDSESLIDRFKRMMAESNRSGAKNRLPLPPTTGHWSPNEPNTVLRVLCYRYDETAT KFLKKTYNLPKKI</aaseq>

Gene Sequence

<dnaseqindica>4803..5728#4522..4711#3536..3979#2347..3210#97..630#cctttctctctcctcctcccctcaccacgagagcgagcgcggcgagctccccacccaccaccaccaccgacggcgactacctccgccgctgccgcgatgtctcgcctcttccgcgagtcccgccgcgactcctcctcctccaacggctcctccgccgccgccgccgccacggcctccaccggcggcctcccctccccgttccccgacctcggcgtccccctctccgccgccgacctccgcgaggccgcctacgaggtgctcgtcgcctcgtcccgcaccacgggagggaagccgctcacctacatcccccaggcggcggcatcggcgggtggtggtggtgggccggcgtccccggcctccgcctcgtctctctcctccgcgaacgcctcctcctccccgtcgctccagcgctcgctcacctccgccgcggcgagcaagatgaagaaggcgctcgggctgaggtcgtcggcgtcgtccaagggtgggagccccgggagcggcggcggcgggaagtcggtgccgccgcggcggccggcgaccgtcggggagctgatgcgcgtgcagatgcgggtctcggagcccgccgacgccaggatccggaggggcctcctccgcatcgccgcgagtcaggtaaatgaaaggatctcgagctctcttggcttcgggtggttttggttgttagcgcgttcgttcccagcgggatttcgggtgaaaaatgtagcttcaagtttttctcatctgatcatcgccattgtggtagatctgggttgggtttcgtgggagggttcgcgagagtttcaaatttcgctaaaaataccctcgtttctcgtatttctgtttttgtttccgcgtatttttagttagaatgggaaaatgcattaacttgaagtatatctccttttttttttctcgggaggggaataaaaaatgaactctctctctcctttttttttacccgtagatcttgtaatttgttggtgccagccggagtatatccagttattttctgtgatttgtttatcatatagcctcggaagttggaacttagtcaatatacgttttctcaagataatttttatgtgcgccttttattattattactatgactgtttcaataccatgattcttagcttgatctgcggttttgcttcagtagtaggatactcggatgcattgtacaaagcaaagctatacataccaactcttctcgatagagtcacatccaaatggttgttgctagcatatcttataatgtcaacaaggacaataatttagtgttttgttcgaatgcatggattttatatcaatttcaccgtagattaattcatttcacacatgatttttcctgtgtctgaaatgggttcgtaatgttatcatcggactgtttttgataagtacaaagtgacggaaatgttttttgctattttacttatgcatgctcataagtttgtagattggatgtgtctccacaaaaggacaattagccatttattcttgtcatgctcactacaaaacaaagacatctttattttaccgcagttttgaggaatggaaacagtatatggcaatgtactgcagtcatccatgagcaatgtactagaggcatccatgtactagaggcagtattgaagaaagatagttctacaaagtgtcgtaaaatttgtgattttagtgctgagtgcagcgtactgagtgtgggaggagggaggagcgagggtatctactggattatcttaattgctggattatcttaattgcagaagctactctgtcataaccaaaacatcctaaatctacaccctgagtgttgagcttcctgccttgaccttcatgctctaagttgtcttatatgcattctgaaaatggttgattcattgcacatctccacttcagtaggtttcttagttaaactgtgctgaatgatgatatttagatctttattgccaagtcttctccccaaaagagcaaatttgcaggctttagatgaccattgtaagtttggcagtttagctttagctgcctgattattttttttattgtatatgttttatgtttttatataccctcctatgacatggtctgtttgatagatgtgttaacagatcaacaacattggacagtttaaactttaaacaaacacatagctaagtattgacatgttgctgaatgtgtgtttgtgttttctggacttttagcatgtttgatgtcaacaagccaaacatgatcttattgtatatatcatatcaaagatactctactctgctctattattgttcgggacttaacgcctgttcctgtaattgttggtaccaagtttgaactccatttttctttttcttgaaacagcttggcaggcgtgctgaatctatggtcttgcccttagaattcctacagcagttcaaggcatcagatatccctgatcctcaagagtacgaggcatggcagagtaggaacttgaagcttcttgaggctggtttgcttgttcacccacttgttccattgaacaaatcagatgtttctgcacaacgactgcggcaaattatacgtggagcatacgatagaccacttgaaactgggaaaaactctgagtcaatgcaggtcctacgtagtgctgtcatgtcccttgctggtaggtctgatgatgggacttctgacggatgccactgggctgatggtttccccttgaatctccatctataccagatgttggtagaagcttgctttgataatgatgatggcactgttgttgatgagattgatgaggtgatggagctcttaaagaagacctggggtattctgggaattaaccagatgcttcacaacctttgctttgcttgggcattgttcaaccattttgttatgtccgggcaagtagatattgagttgctctctgctgcggagaatcagttggccgaagttgcaaaggatgccaaaaccacaaaagatccaaattacagcaaagtgttgagttcaactttaagctcaataatgggttggacagagaaaagacttctggcttaccatgagaccttcaatacaagtaacattgagtccatgcaaggtattgtgtcaattggagtgtcagctgcaagggttcttgttgaagatatatcccatgaataccgtcggaggaggaaagaagagactgacgtagctcgcagcaggatagagacctacataaggtcttcactccgtacagcttttgctcaagtaagtccctattatttctcactctgattcatattgattaaatgttatattccatactttggtatgctgagatgccttgtttagattattgcaatatctttacttttaatggctaatgcgctttggggaagaaaagctagaaagtagattcctggtaatcaaccacaagaaactgttttgttcaaactcaagccatcctattagtaattttgtttcttttgaaccatataatttgaacttttcaaatcttgctagttgatcctttcatgtacgtcttttctatagtgcagtagcacagtaatgtgacacagctttcactttgcagagaatggaagaagcagattccaagcggtcatcaagaaaccctacccctgttctgtctatccttgcaaaggacattggtgacctagcaattaaggagaaaaatttgtacagcccaattttaaagacatggcatccccttgcttcaggcgttgctgttgccacccttcattcttgctttggaaatgagctgaaacagttcatagctggacttacagagctgaccccagatacggttcaagtgcttaaggctgctgataaattagagaaggatcttgttaatattgcagttgaagattctgtggatagtgatgatggaggcaagtcattaatcagagagatgccaccatatgaagctgaaaatgcaattgctaacctggtgaaagtttggattaaagaaaggatagacaggctcaagggatgggttgatcggactttgaaacaagaggtgctcttactttatttcacagtacatatttttttcttttggtataaacagaaactatcttaatttagtaactgatgatgcatgttgttgtgatttttattacgataagactaaattactctgtgcatgtagatgcataacacttgtaaacattatctgctatttttcctgaaccgtccatatccatgtgtcattgatgactgcaatctccaatctgggctctgatatatgttcattctctcatcttatcccaactatggctgccaaaattgccgcatttgtttgatttgcagtcaaaattttgacatcacaccagtttttcagaatggaaaaaaaattatagctagttgagtcacatccagatgcatgctatgtgtaaaccaaatgttagattggctcagtcaacttgtgagatgtaattgtcctgaatattcttcttgaatgatgagtccaacttgttcttgacatattgtgtttgaattaacttagcttgattttcctgttctaaaattccactaagtctgtcaatgtctttcatgcagacttggaatccagctgccaacagagagaatattgctccctcttgtgtggagatgcttcggatggttggtgaaacattagatgcatttttccaattgcccattccaatgcatccagttcttcttcctgacctgatgtttggacttgatagaagcctacagctttttgtgtctaaagcaaaatctggctgtggtaagtactgagctcatggcacatttttctataacatggtgttcagatgcagggtacaaatgttcatattttaaacatgcattaattacaggaacaaggaattcttttatgccccaactacctccgttgacacgatgcgaggtaggatcgaatatattgttcaagaaaaaggaaaagccacagaatccacagtaccgaggatcacaaaatggaacaaccaatggcgctgatcccttagcccttcctcaactctgtgtacgcttgaatacgcttcaattcgtgcgaggtgaactcgagaacttagagaagaagataaaaacaggcttgcggaatgtcgagtcagctcaggcagatgttaccgatggattggacatcaaatttgagctttgtcagacagcctgtcaagagggcattcagcagttatgtgagacaactgcatataaggtgacattctatgatttggggcacgttctctgggatatcctttatattggtgacattgcatcaagtaggatcgagatattgttgagagaactcgaccctatactagagaccatatctggtatggtgcataacaaagtgcggaaccgtgctataaccgcattgatgaaagccacttttgatgggttcttgctggtgcttcttgctggtgggcctttgcgtgctttcacccgtcaagactcccagataatagaggatgacttcaaggcccttaaagacctgtttttagcagatggtgatggtttgccagaggaattggtcgataaggcatcctcccaggtcaagaatgtcctacccctcctacgaacagactccgagagccttattgaccgattcaaacgcatgatggctgagtctaatcgatctggagccaagaataggttaccattgccaccaacaacagggcactggagcccgaacgaacccaacacagtcctgcgagttctgtgctaccgttatgatgagacggctaccaagttcctaaagaaaacctataatcttcccaagaagatctgatgaactcgatgtacattttctggaaacaaaatcatgaaacccactgaggaagtcaggatttggaatgattttgtcacatcctcctttgaggaacactaccattgtaaagctaccactgcggagtttgccttatctgaggcgattgatttgaacgggggagttcaattcagcaacttggcccttctatcacatgctgttcagtggcgccaagaaatatgctggtactcttttctttttcttttttccttttttttttgggggggggggattacttacaggtcgatttgtttattattatgattatatgttttaccctaatccagttcttttgctgacctttgccgctgcatgtgtgtatttttccagtagctgtagtttgcaacagatatacccatcttgtgaataagttttgtactggtgtgacttgctgcgttggacttgagtatatcattatgcaaggcatctggttcctgcattcgtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0346700, RefSeq:Os09g0346700