Os09g0347700

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Revision as of 07:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0347700| Description = Similar to Sec61p| Version = NM_001069480.1 GI:115478702 GeneID:4346811| Length = 4115 bp| Definition = Oryza sativ...")
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Gene Name

Os09g0347700

Description

Similar to Sec61p

Version

NM_001069480.1 GI:115478702 GeneID:4346811

Length

4115 bp

Definition

Oryza sativa Japonica Group Os09g0347700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:11480988..11485102

Sequence Coding Region

11481538..11481777,11482215..11482350,11482468..11482592,11482694..11483048,11483133..11483360
,11483538..11483881

Expression

GEO Profiles:Os09g0347700

Genome Context

<gbrowseImage1> name=NC_008402:11480988..11485102 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:11480988..11485102 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggcggttttcgagtactgcatcttgtcaggccctttctggctttcttgccagaagtacagagcgctgataggaaaataccattcagagaaaaagtgatctataccgttatctctctcttcattttcctggtgtgcagtcagctaccactctatggaattcactcaactactggagcagatcctttctactggatgcgtgttattcttgcttcaaaccgtggtactgttatggagctgggtattaccccaattgtgacatctggaatggtaatgcaacttctagtgggatcaaagattattgaagttgacaacagtgtgagagaggaccgtgcacttctgaatggcgcacaaaaattgctgggcatcttgattgctattggggaagctgtggcatatgtgctgtctggaatgtatggcagtgtaagccaacttggaactgggaatgccattctcatcatcctccagcttttctttgctggcatcattgtcatctgtcttgatgaacttctccagaaaggctatggtttgggttctggcatttcattgtttattgctaccaatatctgtgagaatatcatctggaaggcgtttagccccacaaccatcaacagtgggcgtggtgctgaatttgaaggagctgtcattgcattgttccatttgttgattactagaactgacaaagtccgtgccttgcgtgaagctttctaccgtcagaaccttccgaatgtgacaaatttacttgcaactgtattggtcttcctcatagtcatctacttccaaggcttccgtgttgtgcttccagtgagatcaaagaatgctagggggcagcaaggctcatatccaattaagttgttctacacttcaaacatgcccatcattctgcactctgcactgattaccaacctctacttcatatcacagcttctctacaggaggtacagtggaaattttctggttaaccttcttgggaaatggaaggaatctgagtactctggccattcggttcctgttggtggtctcgcttactatgtaactgctccatcaagtttggctgatgttcttgcgaatccgttccatgcgctgttctatgtggtattcatgctgtcagcttgtgctctcttctcaaagacatggattgaagtatctggctcatctgcaaaggatgttgctaaacagttgaaggaacaacaaatggtgatgcctggccatcgtgagtcaaacttgcagaaggaattgaacagatacatccccactgctgctgcatttggtggagtgtgcattggtgcattgactgttctagctgatttcatgggtgcgattggttcaggaactggtattctgcttgctgttaccatcatttaccagtacttcgagacattcgagaaagagagggcaaccgagcttggtttctttggtttttga</cdnaseq>

Protein Sequence

<aaseq>MAGGFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIF LVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKII EVDNSVREDRALLNGAQKLLGILIAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFF AGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIA LFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLVFLIVIYFQGFRVVLPVRSKNAR GQQGSYPIKLFYTSNMPIILHSALITNLYFISQLLYRRYSGNFLVNLLGKWKESEYSG HSVPVGGLAYYVTAPSSLADVLANPFHALFYVVFMLSACALFSKTWIEVSGSSAKDVA KQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILL AVTIIYQYFETFEKERATELGFFGF</aaseq>

Gene Sequence

<dnaseqindica>3326..3565#2753..2888#2511..2635#2055..2409#1743..1970#1222..1565#ctcttcaactgctactactctctctctcctctcgtctcgtgctcttgcccccctcatctctctctctcgcttcctagggtttcgcgccctcggatcccgcggcggcggcgagaagcttccactcgcctcggcggcggcgccggccaggtgaggcagcagctcgggctctctctctcctcctcttgttccttcctctcgccgtcggatcggggcgggggtccattttgtttgcggcttctcctgtagatctgtgttgcccatgctcatgctcgatctgaaccgtatctatccgcggatacgtgcgtttgatggtgcgggctcatttggtttgctacgggatatggatgcgtttgatggtgcgggtgggtttttggtgggtaggtggggcgtccagatccatgcgcatgggtggaatggatgggtccatggctgggttggtgtgttcgttggtagttgtgatttaccggcgggtctcggatcgatgctagtgaagtattatgatcgagagcgatgttttggttggttggttggcggggatttgtgcttggattctgggacaagtttttgtttcgtggcggtgctgacaagcttggtttgaaggaaaaaataataatgataataacaattaaatgcagattaggcgtagatatatgctaaatttgactccggatccaagtcaatttgccaatttcgagaggaattgagaattgtcttttttttcccttttgcgttacgaaagttgccatactggacatgaatgaaaaactttaaatgtctgctgcctataaatcatctgcttccttttgcaatcttaggcagagctacttatctagctccttctcactttgccaccttttctttgtcttaattatatctacccactcttcataaggaaatagagatgttttcccactctcagtaaatgtggattatctcgccctatgcatttttttgtcaaagaagaccgtgatggttcatgtctgatttctggaatgttcctgttttagcatttcaatatttgggttaatttgcttctgttccattcaaatggatgcatctccttgatcaggaccgtaactgagtgaataataaggaataactgagtgaataataaccaagctgggaaaacttttgtagtttactgggttatattatgtttagtaacatttttcatgtgcactgtaccaaatgctgatctgtttttttcctggacacagaaagatggctggcggttttcgagtactgcatcttgtcaggccctttctggctttcttgccagaagtacagagcgctgataggaaaataccattcagagaaaaagtgatctataccgttatctctctcttcattttcctggtgtgcagtcagctaccactctatggaattcactcaactactggagcagatcctttctactggatgcgtgttattcttgcttcaaaccgtggtactgttatggagctgggtattaccccaattgtgacatctggaatggtaatgcaacttctagtgggatcaaagattattgaagttgacaacagtgtgagagaggaccgtgcacttctgtaagtatttatagaaataacacaatctcctatttattggtggataacatgttcagagtctagtgtgcatgtactgctagccagtcttctacctagtgttttagctaacatcagaaaattgcagagcttccttattctttttctttctcctggtggtaatcttttgatgtgacttaggaatggcgcacaaaaattgctgggcatcttgattgctattggggaagctgtggcatatgtgctgtctggaatgtatggcagtgtaagccaacttggaactgggaatgccattctcatcatcctccagcttttctttgctggcatcattgtcatctgtcttgatgaacttctccagaaaggctatggtttgggttctggcatttcattgtttattgctaccaatatctggtaagcatcctaaacttctttctcttgctgatgtgacattttgtcgcaatttagcttattattggtgaacttgctgttgcacagtgagaatatcatctggaaggcgtttagccccacaaccatcaacagtgggcgtggtgctgaatttgaaggagctgtcattgcattgttccatttgttgattactagaactgacaaagtccgtgccttgcgtgaagctttctaccgtcagaaccttccgaatgtgacaaatttacttgcaactgtattggtcttcctcatagtcatctacttccaaggcttccgtgttgtgcttccagtgagatcaaagaatgctagggggcagcaaggctcatatccaattaagttgttctacacttcaaacatgcccatcattctgcactctgcactgattaccaacctctacttcatatcacaggtgcgtgctgtaattgtagtggctttagtaatatttacatgactgagcaagttttaacatgataactgagcaagttttaacatatatttattttgttgcagcttctctacaggaggtacagtggaaattttctggttaaccttcttgggaaatggaaggaatctgagtactctggccattcggttcctgttggtggtctcgcttactatgtaactgctccatcaaggtgaataatcgttatgtttgatgtcatcattgtatccttatggccttgctttttgtttttgtctccattttatgtttctgtttttgttcttacctttcatgtttggaaaccatgcagtttggctgatgttcttgcgaatccgttccatgcgctgttctatgtggtattcatgctgtcagcttgtgctctcttctcaaagacatggattgaagtatctggctcatctgcaaaggatgttgctaaacagttgaaggtaaagatgtagatacatattttctatctagttattgttcctgtttacctatagtccagctcataacatttcgtgtgtggtgatgtcttatgtatgatatcacacctgcacatgttttgatgtatgctagcccattgtgcagctctggattctgtatacatgaaactctagacattagagtcattcaggcacatgaatttttcaagtggtgttcaatgttttccatgaggccttatccaaagtttcttagccattattatcttatctgaaactgctggagccttttagtggatatttagaaactccgactttgtactggggaatctatatatagtgggatatttagtgttgaggtgatctaattagtctatatttgtttacatacagaaatgttactaagtccatctatgaactccatttctttgccaatataacaggaacaacaaatggtgatgcctggccatcgtgagtcaaacttgcagaaggaattgaacagatacatccccactgctgctgcatttggtggagtgtgcattggtgcattgactgttctagctgatttcatgggtgcgattggttcaggaactggtattctgcttgctgttaccatcatttaccagtacttcgagacattcgagaaagagagggcaaccgagcttggtttctttggtttttgataccgttgcttgaggacattgttataccaatagttggatcttctttcaaatgaaagtacttcttggccggctgtttatggatgtaattggagagcttaaagtcagtttaggttgcccgacttatttgaaaatgaggtactcgtttaaggttctgcgtgtgatttcaggcctgtatggtggtatatgccctgtttcaagtacagccatggccatcatcgatccgtcttccgcagccttctgtttttcgactatgtagtaaccataatttgggatcagttttagtcatttggaactgaatatattatcccttttttttgcgacaatcatctctactaatccctctttctgattcctagaaattatggagtaatgcactaattcctcttttgttctttgctttagaattttgaaatttggcagtctaatatcttgcattgtatttgtatgtgcgaagagcaccatgtttttttttttcacaatgttaattgttatattcgtgttcccttgaatacattgtattaaccatttaagctatggcaagaggtttaac</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0347700, RefSeq:Os09g0347700