Os09g0347800

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Revision as of 07:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0347800| Description = Conserved hypothetical protein| Version = NM_001069481.1 GI:115478704 GeneID:4346812| Length = 4475 bp| Definition ...")
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Gene Name

Os09g0347800

Description

Conserved hypothetical protein

Version

NM_001069481.1 GI:115478704 GeneID:4346812

Length

4475 bp

Definition

Oryza sativa Japonica Group Os09g0347800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:11488138..11492612

Sequence Coding Region

11488189..11488264,11489051..11489092,11489416..11489525,11489605..11489673,11490554..11490592
,11490675..11490748,11490843..11490909,11491325..11491401,11491475..11491637
,11491731..11492414

Expression

GEO Profiles:Os09g0347800

Genome Context

<gbrowseImage1> name=NC_008402:11488138..11492612 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:11488138..11492612 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctcaagcagaaggggaccgacgccgccgccgaccccaagaagcgccgccgcgtcggcttctccggcatcgatgctggcgttgaggctaacgagtgcatgaaagtgtttattgcaagaaaccctgacgaggcaggctcagcaaatagcacttctcttcaaccatttgacctaaatcatttttttggtgaagatggcaagatatatggctacaaaaatttgaagatcaatgtgtggatcagtgcaatatcatttcatgcatatgctgatatctcatttgaggaaacatctgatggaggaaaaggaatcacagatctcaagcctgttcttcagaatatttttggggaaaacttggtagaaaaagatgaatttctgaagacattttcaaaggaatgtgaatatctcagcaatgtggtgacagatggcaatgtcattaaacatgatgcttcaattgatgaagattcagcagttgagattgttcgagttgaactacaaggtgctgctgcttttctttattgtcgtctggtgccacttattctgcttttggttgaaggttcgacgcctatagatataactgagcatggatgggaaatgctcctggtagtaaagaagtcagcacaggcgtcatccagctctaactttctagtgctagggtttgcagctgttcatcatttttatcactaccctgagagcactcgcctgcggatcagccagatactggtcttgccaccttatcaaggtgaaggccatggacttcgtcttcttgagacgatcaattctatttctgagtctgagaacatatacgatgtgaccatagaagatccttccgattaccttcagtacatacgttcatccattgactgtctccgccttctcaccttcgatccaatcaagccagcgctctgttccatggtctcatctctgaaggataccaacctttcgaaaaggaccagcagcttgaaaatggttccaccttccgaccttgctgagacggtccgacagaagctgaagatcaacaagaagcagttcctccggtgctgggagattctgatctacctaaaccttgacgctgaggaccgcaagagcatggacaacttcagggcctgcatctacgaccgcatcaaaggcgagatacttggcacttccactggccccaacgggaagcggctcgtccaaatgccgagcaatttcgacgaggagacatgctttgctgtgtactggacacaggacggtggggatgcagatgaccaaactgttgagcagcagcctgaggatctcaagacccaggagcagcagctgaatgaggtggttgacagccaaatggaagagatcgtcgagatagccaagaacgtcacctcacgcggcaaggataaactgagcgtttcttgctccgtatga</cdnaseq>

Protein Sequence

<aaseq>MALKQKGTDAAADPKKRRRVGFSGIDAGVEANECMKVFIARNPD EAGSANSTSLQPFDLNHFFGEDGKIYGYKNLKINVWISAISFHAYADISFEETSDGGK GITDLKPVLQNIFGENLVEKDEFLKTFSKECEYLSNVVTDGNVIKHDASIDEDSAVEI VRVELQGAAAFLYCRLVPLILLLVEGSTPIDITEHGWEMLLVVKKSAQASSSSNFLVL GFAAVHHFYHYPESTRLRISQILVLPPYQGEGHGLRLLETINSISESENIYDVTIEDP SDYLQYIRSSIDCLRLLTFDPIKPALCSMVSSLKDTNLSKRTSSLKMVPPSDLAETVR QKLKINKKQFLRCWEILIYLNLDAEDRKSMDNFRACIYDRIKGEILGTSTGPNGKRLV QMPSNFDEETCFAVYWTQDGGDADDQTVEQQPEDLKTQEQQLNEVVDSQMEEIVEIAK NVTSRGKDKLSVSCSV</aaseq>

Gene Sequence

<dnaseqindica>52..127#914..955#1279..1388#1468..1536#2417..2455#2538..2611#2706..2772#3188..3264#3338..3500#3594..4277#ccgcgcgcctccaccaccaccacctcctcctcctccccctccgcaccagccatggcgctcaagcagaaggggaccgacgccgccgccgaccccaagaagcgccgccgcgtcggcttctccggcatcggtacggcacccagctcccttcgtcttctctcccgattcgcgggatttccttcgtgttttgggcgcgggtggggtggcaatcgtggtgcggcgcgctcttcgtgagattctcggcctggggtgggtttgtggagatctgctggtggagcggagcggaggttgggggggtgctttcgattcaagtgtttcgactgccgggatctgtgtttgatgggattcagatgaattccccccctttgttgtgcagtggaagagtggaataattgggaatttgtttttgtgtttgttgaaaggagtgaatcgagttactcgagttcttaatttagatttttctgcagtgaacagttgaatttagcatatcacttggttgcttgtgcaaacgcaggtttagttgttattgcatagtcgggccttgatattgtgattatttttatctgcatagttgaacggggattaaaatatcattgctttcagggagataactttgtagtttatcatctcctgttagatgacaaatttgcaagctgtttgaagctcaacatggttccgactggaaacttttaggattaataaacgaacaaccattgtcaatcactttttgagctgcattcatcctatgaacattgctttgcaagctacacatttagtcaattagatgtatatttgtttataagtgcattatttatggcctttttctctatacttttgctctgtctagcaccaattcttttggatatataaattatttaacttacatattaccttttgttctttccttgtgttgcagatgctggcgttgaggctaacgagtgcatgaaagtgtttattggtattgaacttgctcatccttccatgtgaatctgaactcacttgcactaagaattattttctaattttcttaccctttgtctgtccaagttcctgtttattggcatgcctacaaataagttagatggtctaaaaagattgtctttactttaaatcatgagtttttcatggttgtttgcatgtaattaattgcaaaaataaaagaagaagaagaagtttatgttctcgggaactgattgaactctataaatctgttatcctactactattttgggctactcagattcttactagttacctaccttcctttggtttttgatacagcaagaaaccctgacgaggcaggctcagcaaatagcacttctcttcaaccatttgacctaaatcatttttttggtgaagatggcaagatatatggctacaaaaatttgaaggttaatgaaacaagcgtcctttgttatttgcaatgtgaatttctctatgactttcccccataattttcttttggtgcagatcaatgtgtggatcagtgcaatatcatttcatgcatatgctgatatctcatttgaggaaacatctgatgtgagtactggtccataaaaaagatacacgtattggtttattattatttttgcaaacaatcattgcttaattatattattggggaacatgttgacttagtgtgaccttttcataagagcagatatctgtcccaaatcttgagtttgctagcttttaccattgctgtttatggttttcactgctaatcatgctatctggtaattcctgcagtgttttctgcttgcagaatcacagattttatttgaagcataaacttgtgcattttcattttttattatggtgactttaaaaactattttcatcttttctaaaaacaatatttggtacaatggtgcttttatcatttctcagattcaataccgctggatatagatttacaggcagttgaacaattcaaatttacaggcatatatctagcacactcattccaagttgcatccttgtgggatatatgattagattttcttgagattattattgctctttgcatgattccaccaaaaattatatttttcccattgcacatagtttaatctagtcataagatgacttcaattcttcagttgtcttcggtcaaaaaagcaaaatcttcagttgtttattgtcagtgtctatttatcttgccatggtctcctttgttatattgatatgtgatgtttcctccaagcaatccatttctaatctgctgctgatacatttcctcatctttgaatacactggctgtttttgtttttcttttttccaaagattggccatttttgttctctaatgatgtaatcctgaatttgaaattttgttgacttttattcataagaaacagtagatataatgtttacttgtttcctcaagctactgactaccaaataactaatttctctagggaggaaaaggaatcacagatctcaagcctgttcttcaggtaatatatgctgtttataatgtcttctacatgaaattattgcatgcataactttctaagcttcagttattctctttgacagaatatttttggggaaaacttggtagaaaaagatgaatttctgaagacattttcaaaggaatgtgaatatctcaggtacttctaatagtaataacacccagcaactttatctctttgttgcttcaggaaatagggttgcagggctaaactgttttccttaccgctacagcaatgtggtgacagatggcaatgtcattaaacatgatgcttcaattgatgaagattcagcagttgaggtattccatttgacttgttactttttattgatttgtgatgcttgtgtgttgtgatttttagcacgttaaattaattttgccacaaaatgtttccctattaagtgctgttttgaacgcatgaagcatgaaaaagagttcaatccagcaccccaaattgggacctatttttaccatttatcagactagggtacaaatttcttattcaattagtgcttgtaaagccttgttgagtttaagtaatgttactgtggaaatgtggatgctttaacttcaaattttggacattttggtggtttagatccgtgacttccattccagtccacttttaacttgctgccatccttttatgttgatgatatcaacctattcctttgtggttccaaatcctcagattgatttgcatttctgttcccagattgttcgagttgaactacaaggtgctgctgcttttctttattgtcgtctggtgccacttattctgcttttggttgaaggcaagtgaaggttctgaagaacaatcgtctgatttatttggaagttctttcttctaatagcattacgttttaggttcgacgcctatagatataactgagcatggatgggaaatgctcctggtagtaaagaagtcagcacaggcgtcatccagctctaactttctagtgctagggtttgcagctgttcatcatttttatcactaccctgagagcactcgcctgcggatcagccaggtatgccttcttgttttacttgatctatctgtgggttccattattcaaatgtttgattgctctgcttacatgatcttctttgccttttatcagatactggtcttgccaccttatcaaggtgaaggccatggacttcgtcttcttgagacgatcaattctatttctgagtctgagaacatatacgatgtgaccatagaagatccttccgattaccttcagtacatacgttcatccattgactgtctccgccttctcaccttcgatccaatcaagccagcgctctgttccatggtctcatctctgaaggataccaacctttcgaaaaggaccagcagcttgaaaatggttccaccttccgaccttgctgagacggtccgacagaagctgaagatcaacaagaagcagttcctccggtgctgggagattctgatctacctaaaccttgacgctgaggaccgcaagagcatggacaacttcagggcctgcatctacgaccgcatcaaaggcgagatacttggcacttccactggccccaacgggaagcggctcgtccaaatgccgagcaatttcgacgaggagacatgctttgctgtgtactggacacaggacggtggggatgcagatgaccaaactgttgagcagcagcctgaggatctcaagacccaggagcagcagctgaatgaggtggttgacagccaaatggaagagatcgtcgagatagccaagaacgtcacctcacgcggcaaggataaactgagcgtttcttgctccgtatgacggtacgagtggtaacttggaaaaaactgaatgctgcattgcagccacagctcgcctgatgtctctttgtagctcaagacttcagggtagaaactagaggctagaaaattttcaggtctgagaattatgttctgcgtattctacttgagcttttccgagatgaacttccttcagcgtagtaatcttagttatcattcg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0347800, RefSeq:Os09g0347800