Os09g0361500

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Revision as of 07:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0361500| Description = Similar to Isochorismate synthase 1, chloroplast precursor (EC 5.4.4.2) (IcsI) (Isochorismate mutase) (Salicylic acid ...")
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Gene Name

Os09g0361500

Description

Similar to Isochorismate synthase 1, chloroplast precursor (EC 5.4.4.2) (IcsI) (Isochorismate mutase) (Salicylic acid induction deficient 2) (Sid2) (Enhanced disease susceptibility 16) (Eds16)

Version

NM_001188872.1 GI:297726874 GeneID:9268489

Length

5252 bp

Definition

Oryza sativa Japonica Group Os09g0361500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12414781..12420032

Sequence Coding Region

12417943..12418055,12418177..12418232,12418374..12418486,12418645..12418729,12418866..12418963
,12419090..12419182,12419268..12419342

Expression

GEO Profiles:Os09g0361500

Genome Context

<gbrowseImage1> name=NC_008402:12414781..12420032 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:12414781..12420032 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caattatttcatcggaaatacttaaacatttccagcgaggctttagctggtacacgagcaagggggaaaacaagggctgatgactttcaaattggtcaagatttgctactaagtagcaaagaggataatgaatttactatagtacgggacagcataaagaagaagctggagatgatctgcgatgatgtggttgtccatcccagcaaggcccttcggaaacttccaagagtacaacacctgtcagctcagttagctgcaagaatgaggaatgaagacgatgagtttgacatcctaaatactcttcatccgagcccagccgtttgtggtctgcccactgaagaggcacgccaattcatacaagattatgaaatttttgaccgtggaatgtatgctggacctgttggttggtttggaggagctgaaagtgagttcgctgttgggattagatcagcactactaggaaaaggtcatagcactttagtttatgctggtgccggaattgttgaaggtacaaatccatcctttgaatgggatgagcttgacctcaaagcatctcagtttgcaaagttactgcagtatcaagaacaacatatttgcttgcaagaggctgaaaatatgggaacagtgatttga</cdnaseq>

Protein Sequence

<aaseq>QLFHRKYLNISSEALAGTRARGKTRADDFQIGQDLLLSSKEDNE FTIVRDSIKKKLEMICDDVVVHPSKALRKLPRVQHLSAQLAARMRNEDDEFDILNTLH PSPAVCGLPTEEARQFIQDYEIFDRGMYAGPVGWFGGAESEFAVGIRSALLGKGHSTL VYAGAGIVEGTNPSFEWDELDLKASQFAKLLQYQEQHICLQEAENMGTVI</aaseq>

Gene Sequence

<dnaseqindica>3163..3275#3397..3452#3594..3706#3865..3949#4086..4183#4310..4402#4488..4562#gtggggcacccctcacctcactctcactcaccctcttcttcctcctcacgcctcacaccgctcagtgacctcgcaaaccagccaatggcgccgccgccgccaccgcggacgctgtcgccgtcgtcttcgtcgccgtccctgcgctcctccggccgccgcccgctcccgtcggcgagactcgtacgtactctctctctctctcccacggtttcttttcgcttctgcttcctccgggagctgatcggtgacgcatttcttggcttttgcttggtataggtgggaagatgggtgcagcggccgtcgtgctcgctgtcgatgaatgggtgcggcgcggcggtggcgggggcgggggcggtggcggtgcgggagacgcgggcgttgccggcggcgggcgcggcgggggacgccgtggggcagctcagggaggcggtggcggcgctggaggccgccgacccgccggcgtcgccctccggcatcatccgcatcgaggtgcccgtccggcagcgaggggacgccgtggagtggctgcacgcgcagggcgacctgcgcgcgcgctgcttcttctccgcgcgtgccgccgctcccttgcccgagtgcccggccctcgccatcgcctccgccggcaacggcaacggcaacggagcaggcggcgtcggaggggagcagcggcagcggccggtgagcgtcgccggcgtcgggtccgccgtgttcttccgcgggaccgagccgttctccctccgcgactggcgcgccatcaagaggtaatcgatggtgccatctactactacattttttaatacatgatgataaatgttgattttgaactttgactatactaaaaacatatcctacgcacataagcttctcgtgctcactaactagcaaatttcacgaaaagttctacaaaaaattagacatttactcctattagtattacacatatatgcaaagtttcgtattcaaattcattaaattttagcagtaacaaaagatgaaaaatctgacagttttaagggtaaaaatctgtcagaattttatattttttattacggctaaaatataataaatttgaagataaaattttacatatagatgtaatactgtttgaagtatgtgtacaattttttatagaatttttcgtgacatttgctagttattgtgcacggagtgtgcacaaaaagtttgtatgcataggatatgttcctactaaaaagacatgaatattaggaaatgacctaatatcaaattattagaaggggtgaagcttcaaacttaggttgtctaactcaccactctatagagttagctgtagaccctggacgtttctcaccatactccgtttattgattttgaacatatttctttttattcttttgctattaagagtcaaagttaaaaatgtttgatttacactattcaaaaaataaaaatacttatattttaggatggggtagtatatgatgttattaactttttttaaaaaaatagagagattacaatagtagaaactaaccatgcgtagcaaatttaagaagtaaatgaacagctagttgctagtaatttttttgataaatttcagttggattaataagaaatttacggcgatttcttcctgaaaaataaatagaagggataaatgctcacttggaagtgctttgtgtattggtttaagacacttttctctggtgctcctttatcatgaagcacaaaacttttgcgtgtgttcaagagaaaaaaaaaccacatgatcttgcactgtgttagtgaattctttatatgatcttgaattatctttgaattccttgattgtttttataaatttatttatttatttatttcaatgagcttcatgctggtcttggcccatactgtgtcagtgaacacttcacatggtctcctactgtgttgttggtgatggtgaactattcacatgatcctttattatctttgaatttcttgattgttgcttcatgattgcttttatttttttttattccaatgaggttcatgctggtgctgacccaatgacttgatttatgtccataaagatttcttccaagggattgcccactgattcgtgcttatggtgctatccgcttcgatgccacgagcgatcattcagttgaatgggaggaatttggatcattttacttcattgttcctcaagtaagtccttacttaattaccaggatcaccccagttatggattggaatagatggaatgtgatactgactcctttgaagtgtttctgatacttggtgtaggttgagtacaatgagcttgaagagagctcggttctcgcaacgacgattgcatgggatgattcactttcttggacatggcaaaatgctgtgaaggagctccaatcaactttgcagaaggtatgcatttctctttcttccaattctgtcagtcatgtggaactgtggaagatagtaaccttgttgtgctttctgcagatatcatccagtccaattaaagtgaacaattccaccctgcaaacaaccatactaaatcttaatcatgtccccacaaaggcatcctgggatcttgccgttactaaagctctccagatgattaaagggaagcaaagagaattagtaaaggtaaattattcatttcatttactgtttgctaaagaaaaaatctagacaagtttattccccaaaagaaaaaaaaatctagacaagtcatgttgtgatcattattttgaaataagcttgcatcgatattttctgcaggtcgtactggcaaggtgtagcagatatattactgatacttgcattgaccctgttgaactgttggcatgtttaaaggtatattgcatctcttgtattgctgttaaaacaattagatctttctgacactgaatatacaggttgagggccaaaatgcttatcagttctgtatacagccacctgatgctcctgcatttgttggaaatagtgtatgtcaattctattctgaaaaacaaattccttcatcacatcttctgtgtgatctcttgtatcgattttactccaaatgatttattagaatatctcttactatatttacatgaacttggatgttttttcttattttggccttctcatgttaaataacaatgacctaagttctaactaatgttcattttatgcaaatattctgaatagccagagcaattatttcatcggaaatacttaaacatttccagcgaggctttagctggtacacgagcaagggggaaaacaagggctgatgactttcaaattggtcaagatttgctactaaggtacctttcccttcttcgattcataaacatataatgaacctatctccagatgatttaaggcgatatcaacaccgtccgtgaagaaaataaaaggaggtcctaatataaaactttcttgcagtagcaaagaggataatgaatttactatagtacgggacagcataaagaagaagctggaggcaagttgagttttacactgactgattttttttagtatgatactgacatagtttgttttgttcctagttgcaagaatattattgggggaaaacatggccagtgcagttttattcaaccaaggaatttattatattttacagatgatctgcgatgatgtggttgtccatcccagcaaggcccttcggaaacttccaagagtacaacacctgtcagctcagttagctgcaagaatgaggaatgaagacgatgaggtagtctatgattcagggctttcttcagtcttttatattggaattttcagaatttttgggggtttacttgcaagaagaattttggattttaatttaccatattgtcaaaaaaatgaccacacccgatctgattctttgtgttggcctggccattgcagtttgacatcctaaatactcttcatccgagcccagccgtttgtggtctgcccactgaagaggcacgccaattcatacaagattatggtatgtgcctctataatctattgcaactatattgttattttcataattacaaataaaattgacgataaaagattttttgatgaaagtaaggtttatttatggtgatcagtgaatgttctattgttatgtccatcagaaatttttgaccgtggaatgtatgctggacctgttggttggtttggaggagctgaaagtgagttcgctgttgggattagatcagcactactaggaaaagtaagaaaaaaatgtagtcagtacgattgatcatataattgggatgtgatgtttttttgtcaaatatgtccatgttgttaccatatcctaagggccaattagttaccaagctgttgtttgttctagggtcatagcactttagtttatgctggtgccggaattgttgaaggtacaaatccatcctttgaatgggatgagcttgacctcaaagcatctcaggtattattggtctaactcatgatggattactgctatatttctttttttttaaatgctaatgcatcccatttccaattattttcagtttgcaaagttactgcagtatcaagaacaacatatttgcttgcaagaggctgaaaatatgggaacagtgatttgaattgtaactagtaagtcatcacatattcatagattacttttctagttctttcttatccatttgacagtaatctacttctcaaacaaacacttgtttatatcccatggtttattcagttgaaaattttcatattttttgaaacacggacgcagaagttttaaggttattaatcaatgcagcatctgaacggttagttcaggaaaaaaatcatctcaaagaacataaaatttctgatatttttggtattcagaacaagcattttttttatacttactagttactacaagtatgacgattttcaaaagtatatcctttccactgaaggtcctgacgtcttgtgcacaattttttgcagggagtttttgttttgttgtgaagaagatttgcttttttttttcctgccatgaacttcaaaggattgtcttgttcaagtgcttgcataccaattatgtttccgatcaatcaaacacctcctacatacgcagccgctgaagcataaatccaagaaggcgacgaagataaaagttgcgaagagtacaaaggctatatgtacaataaattgttaattattcagttagtgcagttgtgcaagtatatattgaacctcatagtttgttagcttctttcgaatcgcttatacatttgattcttaaaataaataaatatatataaacacaccattttatgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0361500, RefSeq:Os09g0361500