Os09g0362900

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Revision as of 07:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0362900| Description = SRA-YDG domain containing protein| Version = NM_001069524.1 GI:115478790 GeneID:4346857| Length = 3733 bp| Definiti...")
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Gene Name

Os09g0362900

Description

SRA-YDG domain containing protein

Version

NM_001069524.1 GI:115478790 GeneID:4346857

Length

3733 bp

Definition

Oryza sativa Japonica Group Os09g0362900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12475230..12478962

Sequence Coding Region

12475358..12477531,12478299..12478890

Expression

GEO Profiles:Os09g0362900

Genome Context

<gbrowseImage1> name=NC_008402:12475230..12478962 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:12475230..12478962 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcagttctgaatcctccacccaaaagaagggcgatctcagccatacgcaaatttccacgtgactgtgggagggctgcttctactcttgcggaaagtggtgcctctatggaggagttgcctttagaagcaacacctattagtgtagctaccggtggtgcctctatggaggattccttggcgagaacccctatttcagtccagggtgcttctttggtgtgcggtctagaccattctagtgaggcaatagatggcaagacaattgaagatgatgaatctagcaaggtagaaaataggatccaagagttccaagttgccacaaatgttgccctagatgattttgaaggagccaagaatggtagtacacacccaaatgattctattgccaaaccttctcctagccatggttttgttgagagggtgaatggaaagggatcacaacaagaaaagaagcttgtagcacgaagtgctggggatggcaagatggtaagcaaatatgaagagagattacaaaaaggtactcccgagactcgtatgagagatcttgtcgatgtaaaggcaaaaaagaagatattaaagagtgataagatgaatggggcattgcaaaatgacgctagatcctctggagatggtaagatgaaaacgaaggcttcaagcactcagagaggtgtggtgcgctcggatatgagcttgaagcaaggtgatattgctcgtaaggttgatgccacaggcaaatgcaagggcggcgtgaatagcctcataaaggaggctacatctgggaagcatgctacgactaatggaattgaagaaaatgatgatagagaccttgtcagtgacaggataattgtacaagcactaatggccccagacaaatgcccgtggacacgaagaaggaagtctattggtggttcctccgagtctcgtactcctaagcttaagaaaaagtttggtaggccaaggaaagaattgaaagatactactccaagggaagaagtttccccggaagttgcctcttgtaaagcgatcaagcatgaggccatagaggacaaggaggattcttactttgaggatgaaggcaactctaaggcttcttactcggatgttgaaggcaactctaaggagctagtgcgtggaggaaaggcactagttgtttgtggaggaaagaaggagttatgtgttacactccctccttcggctccttttggcacagatccccgaagcaaaataaggaatttactcataaaattccatgcggcatgccgaaagcttgtgcaagttgaggaacaacataaaggtaatattggaagaattgacatcgaggctggtaaagccctaaaacaaaacggttttattaagcccggacctattgttggcaatgttgcgggagttgaagttggagatgagtttaattttagaatcgaattgtcatttgttggactccatcgcccatatcaaggaggtattgacagtacaaaggtgaatggaatcctcgttgctataagtattgttgcttccggaggttatcatgatgaattgtctagctccgatgaactcatatatacgggttctggaggaaaggccatcgggaataaggcagctggagatcaaaagcttgagcgtggtaatctagctttgaagaattctattgaaactaagactccggtccgagtgattcatggattcaaaggtcatagtaaaggtgaagctagccattctaaatccaagcaaatctcaacatatatttatgatgggctgtacatggtggtggattattggaaagaaggcccagagggctcgatggtctacaagtacaagttgcaaaggatcccaggtcaacccgagttagcattacacataatcaaggcaacgaggaagtccaaagttcgcgaaggtgtttgtgtgcctgatatatctcaaggaagggagaggattcccatacctgcgatcaacacaattgacgatacgcagccaacagcatttaagtacactacggaagtcatatatccacattcctatgcaaaagaacctctgaaaggctgtgattgcacgaatggttgctcagactctaatagatgtgcctgtgcagtgaagaatggaggtgaaatccctttcaattccaatggtgctattgttgaggcaaaacctctcgtatatgagtgtggcccatcatgcaggtgccctccaacatgccacaacagggtgagtcagcatggtatcaaaattccgctggaaatattcaagacggggaacaaaggttggggtgtaagatctctgagctctatctcttcaggcagtttcgtatgtgagtatgcaggtgaggtgctgcaagaaaatggagatgaacatgtagagactgatgagtacctttttgatattggtcatcactatcatgatgaagtttgggaggatcctaaatttgaaggcattttgggtctagaatcttctacgtccaagacaacggaggatactgaaggcagtaaaacaacggaggatactgaaggcagtactatcgatgcatcaaagtgcagcaatgttggaagattcatcaaccacagctgctcgcctaatctgtatgctcaaaatgttctctgggatcatgatgacatgaagaaaccgcacatcatgttctttgccaccgagaacataccgccgctgcaagagcttacttacgattacaattacggtaaagtcgaggataagaatggcaaggagaaggttaaaccttgcttctgtggttcgcctgattgctctcgcaggctgtactga</cdnaseq>

Protein Sequence

<aaseq>MSVLNPPPKRRAISAIRKFPRDCGRAASTLAESGASMEELPLEA TPISVATGGASMEDSLARTPISVQGASLVCGLDHSSEAIDGKTIEDDESSKVENRIQE FQVATNVALDDFEGAKNGSTHPNDSIAKPSPSHGFVERVNGKGSQQEKKLVARSAGDG KMVSKYEERLQKGTPETRMRDLVDVKAKKKILKSDKMNGALQNDARSSGDGKMKTKAS STQRGVVRSDMSLKQGDIARKVDATGKCKGGVNSLIKEATSGKHATTNGIEENDDRDL VSDRIIVQALMAPDKCPWTRRRKSIGGSSESRTPKLKKKFGRPRKELKDTTPREEVSP EVASCKAIKHEAIEDKEDSYFEDEGNSKASYSDVEGNSKELVRGGKALVVCGGKKELC VTLPPSAPFGTDPRSKIRNLLIKFHAACRKLVQVEEQHKGNIGRIDIEAGKALKQNGF IKPGPIVGNVAGVEVGDEFNFRIELSFVGLHRPYQGGIDSTKVNGILVAISIVASGGY HDELSSSDELIYTGSGGKAIGNKAAGDQKLERGNLALKNSIETKTPVRVIHGFKGHSK GEASHSKSKQISTYIYDGLYMVVDYWKEGPEGSMVYKYKLQRIPGQPELALHIIKATR KSKVREGVCVPDISQGRERIPIPAINTIDDTQPTAFKYTTEVIYPHSYAKEPLKGCDC TNGCSDSNRCACAVKNGGEIPFNSNGAIVEAKPLVYECGPSCRCPPTCHNRVSQHGIK IPLEIFKTGNKGWGVRSLSSISSGSFVCEYAGEVLQENGDEHVETDEYLFDIGHHYHD EVWEDPKFEGILGLESSTSKTTEDTEGSKTTEDTEGSTIDASKCSNVGRFINHSCSPN LYAQNVLWDHDDMKKPHIMFFATENIPPLQELTYDYNYGKVEDKNGKEKVKPCFCGSP DCSRRLY</aaseq>

Gene Sequence

<dnaseqindica>129..2302#3070..3661#gctgtgaattcgagagaaaggaagttactagcgatcgggatggccgagagacggaaagtagagtaggtgttggtcaattagagaggacaaatgatgtacatgatggtggcagaaaaaagaggtggttgatgtcagttctgaatcctccacccaaaagaagggcgatctcagccatacgcaaatttccacgtgactgtgggagggctgcttctactcttgcggaaagtggtgcctctatggaggagttgcctttagaagcaacacctattagtgtagctaccggtggtgcctctatggaggattccttggcgagaacccctatttcagtccagggtgcttctttggtgtgcggtctagaccattctagtgaggcaatagatggcaagacaattgaagatgatgaatctagcaaggtagaaaataggatccaagagttccaagttgccacaaatgttgccctagatgattttgaaggagccaagaatggtagtacacacccaaatgattctattgccaaaccttctcctagccatggttttgttgagagggtgaatggaaagggatcacaacaagaaaagaagcttgtagcacgaagtgctggggatggcaagatggtaagcaaatatgaagagagattacaaaaaggtactcccgagactcgtatgagagatcttgtcgatgtaaaggcaaaaaagaagatattaaagagtgataagatgaatggggcattgcaaaatgacgctagatcctctggagatggtaagatgaaaacgaaggcttcaagcactcagagaggtgtggtgcgctcggatatgagcttgaagcaaggtgatattgctcgtaaggttgatgccacaggcaaatgcaagggcggcgtgaatagcctcataaaggaggctacatctgggaagcatgctacgactaatggaattgaagaaaatgatgatagagaccttgtcagtgacaggataattgtacaagcactaatggccccagacaaatgcccgtggacacgaagaaggaagtctattggtggttcctccgagtctcgtactcctaagcttaagaaaaagtttggtaggccaaggaaagaattgaaagatactactccaagggaagaagtttccccggaagttgcctcttgtaaagcgatcaagcatgaggccatagaggacaaggaggattcttactttgaggatgaaggcaactctaaggcttcttactcggatgttgaaggcaactctaaggagctagtgcgtggaggaaaggcactagttgtttgtggaggaaagaaggagttatgtgttacactccctccttcggctccttttggcacagatccccgaagcaaaataaggaatttactcataaaattccatgcggcatgccgaaagcttgtgcaagttgaggaacaacataaaggtaatattggaagaattgacatcgaggctggtaaagccctaaaacaaaacggttttattaagcccggacctattgttggcaatgttgcgggagttgaagttggagatgagtttaattttagaatcgaattgtcatttgttggactccatcgcccatatcaaggaggtattgacagtacaaaggtgaatggaatcctcgttgctataagtattgttgcttccggaggttatcatgatgaattgtctagctccgatgaactcatatatacgggttctggaggaaaggccatcgggaataaggcagctggagatcaaaagcttgagcgtggtaatctagctttgaagaattctattgaaactaagactccggtccgagtgattcatggattcaaaggtcatagtaaaggtgaagctagccattctaaatccaagcaaatctcaacatatatttatgatgggctgtacatggtggtggattattggaaagaaggcccagagggctcgatggtctacaagtacaagttgcaaaggatcccaggtcaacccgagttagcattacacataatcaaggcaacgaggaagtccaaagttcgcgaaggtgtttgtgtgcctgatatatctcaaggaagggagaggattcccatacctgcgatcaacacaattgacgatacgcagccaacagcatttaagtacactacggaagtcatatatccacattcctatgcaaaagaacctctgaaaggctgtgattgcacgaatggttgctcagactctaatagatgtgcctgtgcagtgaagaatggaggtgaaatccctttcaattccaatggtgctattgttgaggcaaaacctctcgtatatgagtgtggcccatcatgcaggtatgacgtgcaaaagcttagcaatccaaaataataacaataactaaataggagtaacatttgcatcatattctgataataccaaagtagattcacagaaccaggaaatatttctcattgcttctgaaatttttaccctttcaacaagggctgacatttggttgcagattcatttgtcagtgaaacaccctgcaacacacaaggaacataaaattgttggtggcatagtttaaaatttctcataaaaccaaccattttcaccttaagtctgtaggttttcacaccagaactattcatttacagcagatcattaggttgaagggaataataaaatatattctcaatcagagagctagacatattatcataacagcgaaattggttcattcaccttaaattggtaggtttgcatatcagaactactcattcacattgcacaattaggttaatttgaaactacaagttctgttccgatgctttgagctaactaatgctaatatgcattgtttgcctgaagttaattgtttttcgcgccagaattattattagattaaacccaaattgtaaattctgtttgaaagctgtgaaataccaaatgctcaaaccaacatattgattacagaagcaaccaattcacgtcaagttaattagtttttacaatagaatttatttgtttgtattggaatatcaagttaaaccggaagtagaagttctgttctaaagcagggagctaatctagctaatctaatgttcaaaactatgtgcaggtgccctccaacatgccacaacagggtgagtcagcatggtatcaaaattccgctggaaatattcaagacggggaacaaaggttggggtgtaagatctctgagctctatctcttcaggcagtttcgtatgtgagtatgcaggtgaggtgctgcaagaaaatggagatgaacatgtagagactgatgagtacctttttgatattggtcatcactatcatgatgaagtttgggaggatcctaaatttgaaggcattttgggtctagaatcttctacgtccaagacaacggaggatactgaaggcagtaaaacaacggaggatactgaaggcagtactatcgatgcatcaaagtgcagcaatgttggaagattcatcaaccacagctgctcgcctaatctgtatgctcaaaatgttctctgggatcatgatgacatgaagaaaccgcacatcatgttctttgccaccgagaacataccgccgctgcaagagcttacttacgattacaattacggtaaagtcgaggataagaatggcaaggagaaggttaaaccttgcttctgtggttcgcctgattgctctcgcaggctgtactgagatgctgttggttgatgatgatgatggcgacaatggtgcccatttttcagtggaacactgttctgtcgtgct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0362900, RefSeq:Os09g0362900