Os09g0363200

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Revision as of 07:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0363200| Description = Similar to mutator-like transposase [Oryza sativa (japonica cultivar-group)]| Version = NM_001188873.1 GI:297726876 G...")
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Gene Name

Os09g0363200

Description

Similar to mutator-like transposase [Oryza sativa (japonica cultivar-group)]

Version

NM_001188873.1 GI:297726876 GeneID:9267757

Length

8174 bp

Definition

Oryza sativa Japonica Group Os09g0363200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12490523..12498696

Sequence Coding Region

12497950..12498079,12498172..12498200

Expression

GEO Profiles:Os09g0363200

Genome Context

<gbrowseImage1> name=NC_008402:12490523..12498696 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:12490523..12498696 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcacgtcaggatacacctcagttgttggacccggcgatagatcaccgacaccggtctcaccttactgcggtgcagggggctcagcttgggacgttccaggcactgcgcccaggacttcgctcgtgctgtcgacgacatcaaccgggtcgtcgttga</cdnaseq>

Protein Sequence

<aaseq>MARQDTPQLLDPAIDHRHRSHLTAVQGAQLGTFQALRPGLRSCC RRHQPGRR</aaseq>

Gene Sequence

<dnaseqindica>7428..7557#7650..7678#ccataatctttcctaattactattattagtgttaagtatattaattaatagagatagttaagtatattaactaatagtgttaacagaggtagttaataggggaggagtgctcgctagcagcgagcacgcgctagctaggagtccccagctgagagcacacgcagctaccaaaaccaagaatttttttcggttttagattttttttaaatatttacataaataatctatcggccaaaaaaattacaaaaataaaccctgtcgcccacctctggggcggcaagctaacgtggcaaacgggggaggaacaggcgttgatggagggagggttttttgcaggaaaacccttgccgccctctggtggggcagcaaggggcccgaatgcaaaaaagccagtcggggctggccattctgcaggcggtcccttgccgccctctagccgggtggcaggcctcgctgcctataaaaggcttgccgcccagcccccagccctcattcctcccccctcaaatccagtgaaaaaaaaaagaagagaggggaggagaagagaagaaggggcgaagccctgtcggattcagacgccgatttcaggtaatattcatagatcctatatgtgactattgagataaatagtgtgtattttttaaaaatttgtttgaataaatgcattatatttttagggttttagttgtactaatctagaagtgcgtattgtagatatcggtaactacgtagatctactagtttggaatcaatacattaccgttgcattggcttacacaagaagatattacgttgtagatgtttattgcatgaaagagtaatatgatctagttatttcgttgacagatatgtcgaacaaacaaatattccaagtttaccatggaccaggaaacgtccgttacgggccaactggggtagatctgtcagattttattgtatcagaaaggggaattgatagaccggctgagaggagtgtaccttttataaaaggatggttaatgaggggcttgagagttgatccacagacaagtgacataacaatcaatgttatagtaagtcgggcaactgagggtttttattgggaattaatgccaattcaaaactctcgagtgtggagatggtatttggaaaatgcattgcaacgcgggtggcctctagctttggttctgtttgttcacccgaaggatccaggtgtgcagatgaacatggatgatggcgagggaccaagtgctgaagtaaatgagacttctgtggaggaggtcaatgcacgagaggacgggggcgtagtagctccactgggcattcaaccaggtggagtggccgacgagggggaggctgtcggtgccattgtggatgaaatggagagggaggattctgacaatgagcgtgtagaggaaggtgattcgtcagacgatgagacggatattaatccagcagaatgggctagtgaggatttttctgggctgatcgtctctgaagaggatagtgtgagatgggagtacaaagaaaatgaggttattcagggagcgatttatagtagagcagaagatatgaaggaggcggtaaaacattttgcagtgtcacttcatagagagttttgggttgccaagtcgaaccggtcgcaatatgaagttcggtgtgttaaggaaaaagatggttgtccctggagagtgcacgcgtataaggggaaatggaaggattattggacagtgtcagtcattaccaagcatacatgttttctacctggtgttcagaaataccacaggaacattacatgtgcatttgttgcatgtgagatgtatgtgcatgtcatcgataatctcacatatgaaccaaggtcaataatccgacacatcgaagagacatacaagtatactattagctatgccaaggcctggagggccaaacagaaaataatagagatgagatttggaacttacgaagcctcgtatgacaatttgccacgcctgcttggtgttatcgaggaaagaaaccctgggagctcttacgaagtgaagaaattcccctcaattgaacatcctggcaagagtgtgctgcatagggcgttcttagctctacatgcatgcaagatgacattcgtgaactgtcgtcctgttctctgcattgatgggacattcttgacaggaaagtatcggggccagatactaacagcaataggggtagatgggaacaatcaggtattgcccttggtatttgcttttgttgagagtgagaataccgacagctggtactggttcctgaaattggttaaaacaaaagttgttggtatgagggcaaatgtgtgcctgatacatgataggcacgctggcattctgcaagcgatagaagagttgcagtttgggagtatggaatgaggataccctggtgtttgggaagatgtacagagtaggtggtgcatgcgtcatatgggagctaatttcttcaagcaattcaagaacaaggagctcatgaacatgttcaagaggctgtgcaatcagaaccaggagaaaaaattcaatgagctttggaagagattagatgagttgacagccaaatgcagtgatcagcgtgcagcggctccatcgaccgccgttgctgaccctcctcaagctcttggacctctcccaatggatagtccaacattggttagaagaactggattggagattcggaaattttctcagtggattctgcatgaaccaaaagagaaatgggccaaggcgtatgacacaggtggtgctagatatggaataatgacaacaaatttggcagaagtttacaactgggtgatgcgcggtgtccatggactgccactagttggcatagtggagttcattttacatgggacatgcaggtattttagggatcggttctaggcagttcttccctctatgccgaacaacaacattttgtttggaactttcatgcagaaaaagctagaggagttgcgtaaaaaggccatgaaacatcgagctctagtgcaaagtacccaacagcacaggtttgagatactatgtcaagataaggcaggcaggggtatctaccgcaagagagtgaagcaggagtgtgttctcaaagccgacggcacatgtcattgctcttgtgcaaagccgaagctgctccacaggccatgcacccatgtcattgctgccgcagcagagtgtggcataccagatgcagtatatgtgtcacagtacttcagtaagcaagcaatatatcatacatggagcggcgagatttatgggttcggcatagctggggagttcacagagactaacgatgaagtactgtaacgccccgattttcgttcgggattaaaaatcattaaataatgcattttctaaaaattaaataaaagttaatcaatttaatcaagtgaattattgggaaaattaaaattttcccttaaaaatcattggccgagaatattttgtaatattctttttgccctaaaacactctccggatttttccatgaattttcggaactcaagaaataattttaaaagcacaaagttcattttaaccaattacataaaaagaaaaacaattaaaaatctcccctccttcactttgggccactttcggcccaaagccctccttctctcccttcctcggccggcctcccctctcctctcttgggccgtcggcccgtttccccttcccctcacgcaaagtttaaataaccccctaggttctcctccctctcttcctccccgacaggtgggcccggcgaccctacccgtcaggccctcctcctaccttcggcttcccaggccgaagccgccatggccggcggttgccgcccatgtcccgccaaatccggcgccctcccgctcgcgccctcgcgcccaaaccgagtaaaatcggttccccaccacctcctccaccaaatcccccacttttccccaatttttggcgtcaaatcgagccctactttgcccacgatgtcgcccacgttgccggccgttgccgcttcaaatccgccacgcccggccacgattcctcctccccgagcctataaaaagcaccctcgtgctctcctcttccgtttccccctcctccccgagctcctcgtgccctctcccgtgctccccacgccgctccgcgcgacgccgcccgccggcgaactccggctacacgccgccgtcgccgtagccaccgccacgccacgccacgccgttggttccttcggcttcgcctcgccctgccgcaccccggcctccgctccgtttccccatcccatcgctgcagccatcctcccaccgcgaacccgagccgccattgccatccgccggctccagccgccgcttctcgccgcttcagccaccgccgtgccgtgccgtcgccaccgtcggcatagccgcgccgagctccaccccgtcctacacctcttttccccaatctcgcaccgaaattccacctccactgtccacccgagccgcctcaactataccacctccagccgccacctctcgccgctctagccgtcgccgcgcagcgtcgccgcgctccaccgcaccctggctgccgctccactccgtccagaacctcacgggagccgcttttccaaaatcaaggtcttgccggccctcggccgcggcttcgttgtggtcgggcgtcgtcggaacgccgttcccgtcgcctcccgcgccggccgccgccatcctttccgccgccggtcgcctccctgtggttgtctcgccgccgcagccctcggtgagctctccctccgcctcctcctttttcccctcctccgccgctccgcgtgcccgctgtcgcgacgcgctgccgtcgccggcggtcgtctggccgcacgccgccacgcgccgtcgttcgatcgggtcggctttgtgtcgtgcccgtgtcccggctgcgccgcctcgtggccgcccgatcggctttgggccgatccgggccgtcggttcccgtggaccggcggtggaccacctcggtggtcccggtccacggtggaccgacgcccttgtgtcgctgaccgatggggcccacatgtcggcgccagccgccccttgctgacgtcagcgatgatcttttcctttgtaaaaataaataataattacacaataattcgttaataattctagaaattcatttaaatggctcaaaacttctaaaattcatatctaattcattagaactccgaattgagccattcaacttgcaaaattcatctaaaattgagctctacatgtttgtttagtttttatgtactgttttcttggtttttattagagtttttcctcgttttgcgtgccagcgtgtagaatccgtcgtttcggaagtccgcggtcgcgaggaaaagagttcggaagatcaaagtgaagaagcaaggcaagtaacacattccccttgagcatgttgatcccaatttataaatgttttactgtttgcaaataaatatgcatgttttgctaattacatggggtcagggttttacctatctgctcgcttgtgccatgtttacttgatatctgtcctttgtcaagtttgggttataaatcgactagctcgtgttacttatgtgacctagctagaactatatgcttagccatgcttaattaccactagctcagatgatgggataattacagtattagacctttttagtatcagaatgagctgcgtgcttgagacatctggccatgcttcatggtcgtaattatccaactaaaatgcgagtgaatggtgggctgtgggtgcatggttttgctagtcgctcccatggcaattaaggaccggttcacgggaaaccctgaaagaattcctcgtacttaccacaagccagcgtgggcaacggctgggcttgtagtgtagcttttctctagccgacgtacccaggcgagggtgggcgtgatggagttgggtcggccggggtgtccggttgatcggcttccggattcactgcggcacgaaaggggggctgcccgttgcctgctggggacgggggcgaaccctaaggtgtggtgcgatctgttagagggggttatgcgaagggtcctgtcacggcctctttccggtatgtcgtggtggcatatcggcgcacggaaacatgtcgtggggctgtgtcttgtgggtacagttgtacacctctgatcagagtaaaactattcgaatagccgtgcccgcggttatgggcggtcgactagattcaccgtgattagtcctaccttaataaatcgacccagtacactgtagttcaggtgggttggttgggcctgttcaacgtggtgtagcgttgatcagtggagatttaatgttactttaattactcaacagttttactgttttgctcaataaaatgttttgcaaccgcctttatgcaaatagccacaaaccatccttgtatccccttgcacgtctgcatcgttggtgtggcttgctgagtacggtggttgtactcagctttgctattattcccccttttcagaagtgtagtgcttctgagctgaagacgaagttagaagaccaaggctcagaccccagttgagttttgcctgtggagtggagctgaagccccgctaggatcgtctttttccgctgctgctgctttcgtttcggtgcgaggactaagtgcttcttctgtaagtattttacgctttatttacgtttggaactgtatattacttgtcgttttgtgtaccctggctggtcatggacagggatttaatacacaaaatagtctagaaatttgggctaaatttatgggcgtgacaagtactcaatattcctgaccatcgaagctccgaggcaaggctggaaggaggaggactcgtcgcatccgcaacgatatggacgagtcggaggctggcagggtgaagcgttgcagcaaatgcgatgaacatgggcacacctacaagcattgtcctaaagacaaggagaaaccaagtgcggcggaggcaggactatcaggatcagcagcagatggagctcgccctacgggtgaaggcactacctccactcgaccacgtcctaggcgtcgtcgtgccacgtctagctatgtggtgtagttcttatgttctatgttggcatgtggctttgcttgtaattcgtttcgaacttatcgatgtgtttatgtttcgtcgtgtaatgtcagacttcggcatgtcatgtctttaggtctcgtgatgtaacatcagactaaggcgcctaacatctttaggtatgctgatgtatgttggacttcgacacgtaatgttatgttatattatcgaactctacatatatgttaaattgcacgtcatcgttatgtaccattagtaacgtttgctatatttaaatagcctgtactcttgttgtacataattattctcatgattttattaatatttcataattttgcaagttatcttttgttttatattactactttttgaattgttctaacacgaaacactatatttttcagagatggcacgtcaggatacacctcagttgttggacccggcgatagatcaccgacaccggtctcaccttactgcggtgcagggggctcagcttgggacgttccaggcactgcgcccaggacttcgctcgtgctgtgagtaccttgcatcgcatcattcctttatgttttcatgtctttctcttcgtgaaattttacgaatatgtacgaacaaattaaccatgcaggtcgacgacatcaaccgggtcgtcgttgacggttcaacgacaatccaacgtttaggcgcggggattccggtacccgtagtgcagttctggcagtacaccgggacttcgtcacaggcacccggcatgtcgagtcagggtccaccactggaccatgctaggaccttatcggaccgcttgctgccttccaccttgctcttcgacatcactgacttcgacttcgcttcaggctcgacagaggacgtcatcggcccctcacagctgggaggcgcaccgccggtgcatacgcaggaccaggcgcaggcctctcctccgccagacactcgtgctacccgtgctgtgccaccggatcgtttcacctactcccaggaccacgtgcgagcacaggcccggaggaccaagcgtggtcgcggcgcggggcagggccagtagagcagtcttctctttttttatttgcttcactttccagtactgtatacttgtgtaatgactacgttgttgttatatgtgcacgatacctttcggcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0363200, RefSeq:Os09g0363200