Os09g0364500

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Revision as of 07:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0364500| Description = GTP-binding protein, HSR1-related domain containing protein| Version = NM_001069535.2 GI:297609350 GeneID:4346869| L...")
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Gene Name

Os09g0364500

Description

GTP-binding protein, HSR1-related domain containing protein

Version

NM_001069535.2 GI:297609350 GeneID:4346869

Length

2953 bp

Definition

Oryza sativa Japonica Group Os09g0364500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12562739..12565691

Sequence Coding Region

12562822..12564126

Expression

GEO Profiles:Os09g0364500

Genome Context

<gbrowseImage1> name=NC_008402:12562739..12565691 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:12562739..12565691 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctctcccgcgcccggcgcctccaccccaccctccagcgaatcctccggccagtcccccctcccgcccatcctcctcctcctccttccccacctcaccgccccgtcttctcccaaacccctaaacccttcttccccttcctccgccgccacctctcgaccaaaccgccgccgccgcaggcgccgccagagaagtcgctggctccggcgaaggtgagctccgatccacctgccgtcagcgcgaatggcctctgcccgggatgcggcatcgcgatgcagtcctcggacccgtcccttccgggcttcttctccctcccttcgccaaaatcccccgactaccgcgcgcgcctcgcccccgtcaccgccgacgacacccgcatctcggcctccctgaagtccggccacctccgggagggcgaggcggcggcggcggcgtcgtcgtcgtcggcggcggtgggggtgggggtggaggtggagaaggaggggaagaaggagaacaaggtggtcgtgtgcgcgcgctgccactcgctgcgccactacggcgtcgtcaagcggcccgaggccgagccgctgctcccggacttcgacttcgtcgccgccgtggggccgcgcctcgcgtcgccctcgggcgccaggtcgctcgtgctgctcctcgccgacgcgtcggacttcgacggctccttcccgcgcgccgtggcgcgcctcgtcgcggccgcgggggaggcccacgggtccgactggaagcacggcgcgccggcgaacctcccgcgcgcgctgctcgtggtcaccaagctcgacctgctccccacgccgtccctgtcccccgacgacgtccacgcgtgggcgcactcccgcgcgcgcgccggcgccggcggcgacctgcgcctcgccggggtgcacctcgtcagcgcggcgcgcgggtggggcgtgcgcgacctgctcgaccacgttcgccagctcgctgggtcgcgtggcaatgtgtgggcagtgggtgcgaggaatgttggcaagtctacactgctcaatgccattgcccggtgctccgggattgaaggcggaccgaccttgacggaggcgccggtgccaggaacgacccttgatgtgatccaggttgatggcgttcttggatcgcaggcgaagctgttcgacacaccgggcttgcttcatggtcaccagctgacatcgaggctgactcgcgaggagcagaagctggttcgagtgagcaaggagatgcggcccaggacatacagattaaaggtgatatatatttgcacatcacccactcaaccccagtcgtgtttgtga</cdnaseq>

Protein Sequence

<aaseq>MLSRARRLHPTLQRILRPVPPPAHPPPPPSPPHRPVFSQTPKPF FPFLRRHLSTKPPPPQAPPEKSLAPAKVSSDPPAVSANGLCPGCGIAMQSSDPSLPGF FSLPSPKSPDYRARLAPVTADDTRISASLKSGHLREGEAAAAASSSSAAVGVGVEVEK EGKKENKVVVCARCHSLRHYGVVKRPEAEPLLPDFDFVAAVGPRLASPSGARSLVLLL ADASDFDGSFPRAVARLVAAAGEAHGSDWKHGAPANLPRALLVVTKLDLLPTPSLSPD DVHAWAHSRARAGAGGDLRLAGVHLVSAARGWGVRDLLDHVRQLAGSRGNVWAVGARN VGKSTLLNAIARCSGIEGGPTLTEAPVPGTTLDVIQVDGVLGSQAKLFDTPGLLHGHQ LTSRLTREEQKLVRVSKEMRPRTYRLKVIYICTSPTQPQSCL</aaseq>

Gene Sequence

<dnaseqindica>84..1388#gtcgaacagctggtgcgcgtcctctcatgtcgagcacctgaccgccggtcacgtagcggcggcggcggcggcggcgcggcaagatgctctcccgcgcccggcgcctccaccccaccctccagcgaatcctccggccagtcccccctcccgcccatcctcctcctcctccttccccacctcaccgccccgtcttctcccaaacccctaaacccttcttccccttcctccgccgccacctctcgaccaaaccgccgccgccgcaggcgccgccagagaagtcgctggctccggcgaaggtgagctccgatccacctgccgtcagcgcgaatggcctctgcccgggatgcggcatcgcgatgcagtcctcggacccgtcccttccgggcttcttctccctcccttcgccaaaatcccccgactaccgcgcgcgcctcgcccccgtcaccgccgacgacacccgcatctcggcctccctgaagtccggccacctccgggagggcgaggcggcggcggcggcgtcgtcgtcgtcggcggcggtgggggtgggggtggaggtggagaaggaggggaagaaggagaacaaggtggtcgtgtgcgcgcgctgccactcgctgcgccactacggcgtcgtcaagcggcccgaggccgagccgctgctcccggacttcgacttcgtcgccgccgtggggccgcgcctcgcgtcgccctcgggcgccaggtcgctcgtgctgctcctcgccgacgcgtcggacttcgacggctccttcccgcgcgccgtggcgcgcctcgtcgcggccgcgggggaggcccacgggtccgactggaagcacggcgcgccggcgaacctcccgcgcgcgctgctcgtggtcaccaagctcgacctgctccccacgccgtccctgtcccccgacgacgtccacgcgtgggcgcactcccgcgcgcgcgccggcgccggcggcgacctgcgcctcgccggggtgcacctcgtcagcgcggcgcgcgggtggggcgtgcgcgacctgctcgaccacgttcgccagctcgctgggtcgcgtggcaatgtgtgggcagtgggtgcgaggaatgttggcaagtctacactgctcaatgccattgcccggtgctccgggattgaaggcggaccgaccttgacggaggcgccggtgccaggaacgacccttgatgtgatccaggttgatggcgttcttggatcgcaggcgaagctgttcgacacaccgggcttgcttcatggtcaccagctgacatcgaggctgactcgcgaggagcagaagctggttcgagtgagcaaggagatgcggcccaggacatacagattaaaggtgatatatatttgcacatcacccactcaaccccagtcgtgtttgtgataatgcgcaattgacatagttgctgctcattttctaaatttcagcacaaatttcttgttaacgagtctagattttctgtagttctctgcaacagaattgaagatactttgcttaagctaaacttttgttcccgcattgaaagtagttcggtaaatcaattattgaggaaatgctgtggaattgaaacaagcgaacagacattgcatttacaatgttcttgtgacatactagtcacatagggaaaactattatcaactccatcaagttccacaaattgttgtgaacaattctagcttgttctagtcctttataacaaaattgaatctgcttttggttaaaagctattatcgattcgaccaagttccacaaattgttgctttccccctaaagacagtgcagtaattttgtaactgaacctgacaagcacatgatactggattggacagaaaatttgcaccttttgcacttatgaaattctaagtcttaaacttgtgacagtttcagttcttagacttatgactgggaatcatggctgactcaatctagatgtgatcctttggtttccaaacactcttctattgccacaggattcttcactcttattatgtgtcatatgagatgatgcatgcttatctaaaacttgttggtaacctatgcagccagggcagtctgtacatattggagggctggtgcgcctggacatcgaagagttaactgtaggatcagtttatgtaacggtatgggcatcaccacttgtcccacttcacatggggaagacggaaaatgctgccgctatggtaaaagaccactttggtttgcaactacaggtatatttattacctgaatgaactttattttctcctaattcatgtagtattgcttaagattataacacaaagttctacatggtgtctttcctgcagcctcctattggccaacaacgggtaaacgaactaggtaaatgggtgaggaagcagttcaaagtttctgggaacagttgggatgtgaattccaaggatattgcaattgctggtcttggctggtttggaataggtctgaaaggagaagcggtattaggactatggacatatgatggtgtcgatgtcgtctccagaaactcccttgtccatgagagggcaacaatatttgaggaagccgggttcacagtttcgaagattgtctctcaggcggatagcatggcaaataggctaaagaaccctaagaaaataaacaagaagaaggataacaaagccaattcatctccctccacagatccagaatcttcaaatccagttgaggctgtagatgcttaaatgatttctattcctttctaggacaggagttcccgaaggtgaattaagttctatgatgttggcatttggtcagttgaggattgatatacagagccataggttgcacaatttatacttgttcagacttagatagcatgctgctctccgcacaagtctttttttttttccctgggatcatggattttatgtagtcttgttgtgggcttgtaacattaacctatggcttttatgtactcaatgaacttctaccac</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0364500, RefSeq:Os09g0364500