Os09g0365900

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Revision as of 07:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0365900| Description = Cupredoxin domain containing protein| Version = NM_001069540.2 GI:297609354 GeneID:4346875| Length = 5279 bp| Defin...")
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Gene Name

Os09g0365900

Description

Cupredoxin domain containing protein

Version

NM_001069540.2 GI:297609354 GeneID:4346875

Length

5279 bp

Definition

Oryza sativa Japonica Group Os09g0365900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12634701..12639979

Sequence Coding Region

12638885..12639772

Expression

GEO Profiles:Os09g0365900

Genome Context

<gbrowseImage1> name=NC_008402:12634701..12639979 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:12634701..12639979 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgcggtgtagcgaccgcctcctctgcagcctcttcctcgccgccgcgctgttcggcgtcgccgccgcggcgacgcggcgccacgactgggacatcagctaccagttcacgtcgcccgactgcgtacgcaagctggccgtcaccatcaacggccacacgccgggccccaccatccgcgccgtccagggggacaccatcgtcgtcaacgtcaagaactcgctgctgacggagaacgtcgccatccactggcacggcatccggcagatcggcacgccgtgggcggacggcacggagggcgtcacccagtgccccatcctccccggcgacaccttcgcctacaccttcgtcgtcgaccgcccgggcacctacatgtaccacgcccactacgggatgcagcgctcggcgggcctcaacggcatgatcgtcgtcgaggtcgcccccggcgccgccggcgacggcgagcgggagccgttcaggtacgacggggagcacaccgtgctgctcaacgactggtggcaccggagcacgtacgagcaggcggcggggctcgcgtccgtgcccatggtgtgggtcggcgagccgcagtcgctgctcatcaacgggcgcggccggttcgtgaactgctcgtcctcgccggcgacggcggcgtcgtgcaacgtgtcgcacccggactgcgcgccggcggtgttcgccgtggtgcccgggaagacgtaccgcttccgcgtcgccagcgtcacctccctctccgcgctcaacttcgagatcgaggtacgcatgcaagctcatcccccatcgccattgccgccattatatattctttacttatcaccaaaaatcaaagtgaaaagcacacacgttgaaacaaaaacacatgctactacataa</cdnaseq>

Protein Sequence

<aaseq>MMRCSDRLLCSLFLAAALFGVAAAATRRHDWDISYQFTSPDCVR KLAVTINGHTPGPTIRAVQGDTIVVNVKNSLLTENVAIHWHGIRQIGTPWADGTEGVT QCPILPGDTFAYTFVVDRPGTYMYHAHYGMQRSAGLNGMIVVEVAPGAAGDGEREPFR YDGEHTVLLNDWWHRSTYEQAAGLASVPMVWVGEPQSLLINGRGRFVNCSSSPATAAS CNVSHPDCAPAVFAVVPGKTYRFRVASVTSLSALNFEIEVRMQAHPPSPLPPLYILYL SPKIKVKSTHVETKTHATT</aaseq>

Gene Sequence

<dnaseqindica>208..1095#attcaacgtgcaagcgcgtcgatcccatatcgcacatatatatacacatacatagcaggggttgcacaataccatctccaaacatcaaaaacccaagctcgctcgctcatcggcgagctccaaatccacctgtgtagctcaacaggacgcacacgcagagcagctagctaccaaagcataacaagctctgcagcctcaagagtgaacatgatgcggtgtagcgaccgcctcctctgcagcctcttcctcgccgccgcgctgttcggcgtcgccgccgcggcgacgcggcgccacgactgggacatcagctaccagttcacgtcgcccgactgcgtacgcaagctggccgtcaccatcaacggccacacgccgggccccaccatccgcgccgtccagggggacaccatcgtcgtcaacgtcaagaactcgctgctgacggagaacgtcgccatccactggcacggcatccggcagatcggcacgccgtgggcggacggcacggagggcgtcacccagtgccccatcctccccggcgacaccttcgcctacaccttcgtcgtcgaccgcccgggcacctacatgtaccacgcccactacgggatgcagcgctcggcgggcctcaacggcatgatcgtcgtcgaggtcgcccccggcgccgccggcgacggcgagcgggagccgttcaggtacgacggggagcacaccgtgctgctcaacgactggtggcaccggagcacgtacgagcaggcggcggggctcgcgtccgtgcccatggtgtgggtcggcgagccgcagtcgctgctcatcaacgggcgcggccggttcgtgaactgctcgtcctcgccggcgacggcggcgtcgtgcaacgtgtcgcacccggactgcgcgccggcggtgttcgccgtggtgcccgggaagacgtaccgcttccgcgtcgccagcgtcacctccctctccgcgctcaacttcgagatcgaggtacgcatgcaagctcatcccccatcgccattgccgccattatatattctttacttatcaccaaaaatcaaagtgaaaagcacacacgttgaaacaaaaacacatgctactacataaacctcgatttcgattaatctcgattcacagaaccattacgtggcacagacagagtagtgatggatcagaaatgcataggggttccacaagatggtcgtagccagatgatctggtttcgaaagctcaccacttctaattatttaatattagatctttcgttaatatttgtgtctttagtgtagtgatcgatccacttatccccaaattaagtacaaattgagatggcgacgctgggagtaggtattactagttggttaattagcatgtctaacacatttgccatgcaaatgaatggatggaaacgaccacatgcacgaacttggtaggaaattggacattgggtagctctcgcgcgtgcggtcaaccgggtgaaccctacaagattgggttttcgccgtggcatctcgaccagagagatgagagatcgcccaaaatcacggtcacatgttcgaagaatcgcaccaatatcgagacagacgagcatcttttacttgtcccggcaattgtgccactgcacgatattccgtaggattagtatattttttgtactacaagtatatatataatccatcatgtttgggagcgtctgcgagcaaatctgcaagcaagcaggttgatttcgtcaatggagaaatctgtaagcaagctgaataggctgaacaagttagctgaatagtgggggatgatcctgacacaacctaatttgggccctagttagttggtgtttgtacttggctttggctgcatcaactacgtgacaacgagtttaattacttggtaataatgccatccaaccaaatgtgttgactcatatatcgaacattgacttgggtactacgtagtatatgtacgagactagcaactcgtcatgggctcatggcgttcgcaatgaagcttcctttcgctgtccaccgaatagtttccgattaacacgcctacgcggcttgacttgactattactctatctgtttcatattacaagattttctagtattgtccacattcatatagatgtaatgaatcttgacatacataatatatgtctagattcattaacatatatatgaatatagacaatgctagaaagtcttataatacgaaacgcagaaagtatttttttaaatatatcgttactagatgatttataaatagtcactactagaaaactatttctgcaggcggctaaaattggtctgtccattgaaaactatttttgaggcggctaaactagttgtacaaatataaaaactagagtattgtttaaggcaaacacgtagaccagccgaaaatgtcggcagcatagttcagtgtaatttaaacaaccacaagaacagataataatagtgtacttacaagcttacactataaccaaagtaattagccgttaaccctatcatgacaatatcacgtatgataaggtatactagttgcagtacataagtacaatcaacgaacaatcatatgatacgatggcccgtgatttgcgtgagatgcaagagatgatacacatgccggcccctacttcttggccgtggcgccatgttcgagaaagcctgcaaccgcgtagtatgggcataaaaaattcagcaatgtgtatagcttggtcagttgacatgcatctcgcttggaaattgctttgaggcacgacaaactgaacaagtggggaacgggcaaatagcatctgcatgcagtacacttctccgtataaaagtatatcctccttgcatgtagggaaaagtaagaaataattaaggctccgtttcacttacacgttaagggactttgatttgtagaaaaagtgtaggaaatttgaaagattttctattaaaccctttgaaacaaaggattgaattttatactatcttttaaagtttctatggaatgggtaatcctatagagattttggaggaaagttagcaagaggtccaacctcttggaaaaatttctttgagtctatctctctcatccgattcctgtgttttttctgtggttcaatcaaacggtcattcctatatttttcctgtattttccaatcctctgttttacacctgcattcctgtcagaattctgcgtttctcctattcctccgtttttccattcctgcgattcaaaggggccctaaacgagatgaatcatcagccctgacagcacatgttgagtactctctccgtcccaaaaaaaaaaacttaaactagaagggaactccctccgtcttaaaacaagcccctccgtctcaaaacaagcatgagatgggacataattaagtacaacaaatatggagacggagggagtaactactacactagttgtgttaggaccgctgtacggctataatatctccgtgcacgatacagtagtgtaggaaagtgattttatccctcgagaagatattcacttgtttcgtacatgtcacctaaaatagtcgtcaaaaaattttaaaaaaactggcaacatagattaatatggaatatatcacttcacaaacatgcacattcaaatttaacttctacaagttgtaacaaaaataataaatatagctgcaaatgtacgataactattttcagtttaatttgttctttttttgcaacttgtagaagttgaatttgatcttgcatgtctgtggagtgatatattttatattaatatatgttattatttttttaaaaaaataataattattcagatgaaatacaaacaacgaggggatgtctggataaaaatccacatccgtagcgtagcataaatatctctagtgtgaagtattcacactgtagagctcagatttttctcgccgatttagtaaaacagatgatcagtgacacagtaatcttaattttctgaataagtcattgacacagtaaaaatacgagttacaacttggttaatccgtggtaattaaacgattaattaatgtgttaatcaattccgcaggggcacgagatgacggtggtggaggccgacggtcactacgtgaagccgttcgtggtgaagaacctcaacatctactccggcgagacctactccgtcctcatcaccgccgaccaggaccccaaccgcaactactggctcgcctccaacgtcgtcagccgcaagccggccacccccaccggcaccgccgtcctcgcctactacggcggccgccgcaacagcccccgcgcccgcccgcccacgccgccgcccgccggcccggcgtggaacgacaccgcctaccgcgtccgccagagcctcgccaccgtcgcgcacccggcgcacgccgtgcccccgccgccgacctccgaccgcaccatcctgctgctcaacacgcagaacaagatcggcgggcagatcaagtgggcgctcaacaacgtctccttcacgctgcctcacacgccgtacctcgtcgccatgaagcgcgggctcctcggcgccttcgaccagcgcccgccgccggagacgtacgccggcgccgccgcgttcgacgtgtacgccgtgcaggggaaccccaacgccaccaccagcgacgcgccgtaccggctccggttcggctccgtcgtcgacgtcgtgctccagaacgccaacatgctggcggcgaacagcagcgagacgcacccgtggcacctccacggccacgacttctgggtgctcggccacggcgccggccggttcgacccggcggtgcacccggcggcgtacaacctcagggacccaatcatgaagaacacggtggcggtgcacccgttcgggtggacggcgctccggttcagggcggacaaccccggcgtgtgggcgttccactgccacatcgaggcgcacttcttcatgggcatgggcatcgtcttcgaggagggcgtcgagcgcgtcggcgagctgccgccggagatcatgggctgcggcaaaaccaggggcggccactgatgatcgtgtagtaaaactgaaattaattaccagaagctagccgttcgatcgccattgatttttatcacaattaattcttttgttttggatactatctcgatcatatggatgcatggtagcttcgtagctagttaattatattcatattagtgtttaacactatgttagttaggtccgtattattccacactatggtgtgtaatttgcaatggtgaaaatggtgatttattactgccaagatgtactgtaaaaaaagtaacaactattcaaataaatgaatgtattacctg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0365900, RefSeq:Os09g0365900