Os09g0373800

From RiceWiki
Revision as of 07:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0373800| Description = EGF-like calcium-binding domain containing protein| Version = NM_001188878.1 GI:297726886 GeneID:9270321| Length = 4...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0373800

Description

EGF-like calcium-binding domain containing protein

Version

NM_001188878.1 GI:297726886 GeneID:9270321

Length

4004 bp

Definition

Oryza sativa Japonica Group Os09g0373800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13099280..13103283

Sequence Coding Region

13099280..13099591,13099704..13100047,13100125..13100451,13101906..13102064,13102149..13102246
,13103207..13103283

Expression

GEO Profiles:Os09g0373800

Genome Context

<gbrowseImage1> name=NC_008402:13099280..13103283 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13099280..13103283 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggcggcatgagcgatggatccggtgccgcgacgacagcgggcggcgtgggcgatggatccgacgccggcggtggaaacagtaactgtgtcgatgatataaagggaggttaccgttgcaagtgctcccatggatacgaaggcaacccatacattaaagatggatgcaaagatatcaatgagtgccttgacaacgctacttacccatgcatgggaatatgcaagaatacgatagggagtttcgattgctcatgctacccaggaagttatatgaagaatggattctgcctgcctaatcaaaagtccacttttcctgctaggcatgtaataggtgcaagtgttgggttcgtcatcctagtgattgccataacttttgcatgctatgtccaacagagaagaaaactacaacatataaaaaacaattattttcaacagcatggtggtctgatactatttgaagagatgaaatctcaacaaggtcatgcattcaaaatcttctccgaagaagaattgcaacaagcgacaaagaaatttaatgaacaagaaattctaggccaaggaggcaatggaattgtttacaaggggcttctcaagagcaactctgaagtagctgtcaaaaaatgcatgacaattgacgagcaaaagaagaaagagtttggtcccatgcttgtgtacgagttcatcccgaacggtacactcttccatctcatccatgaaaaccatggtaatcacatctctctaatcactcgccttcggattgcccatgagtctgctgaggcgcttgcctacctccactcttgtgcttcaccaccaatcctacatggtgatgtcaagtcatccaacatcctccttgacaacaacttctcagcgaaagtctcagacttcggtgcttctatcttggctccaacggatgagatgcagtttgttacgctagtccaaggaacttgtgggtatcttgacccagagtacatgcaaacatgccaattaacagataagagtgatgagaacaagctcgaggatatgttgaatgatcaaattaagaataacgagaatatggagtttctggaagaaatggcagagttagcaagaaaatgcttagacatgtcttccataaataggccatcaatgaaggaaattggagacgaacttggtaggctaaggaaggtcatggaacaccaatgcgcaagacagaacccagaagagatggagagctttcttggggattcatcttatgtgatcaactcaactgttgagagcacaaaaagtttcagcattgagaagaacgctatgaagcgtctcaaatcagggcgctaa</cdnaseq>

Protein Sequence

<aaseq>MAGGMSDGSGAATTAGGVGDGSDAGGGNSNCVDDIKGGYRCKCS HGYEGNPYIKDGCKDINECLDNATYPCMGICKNTIGSFDCSCYPGSYMKNGFCLPNQK STFPARHVIGASVGFVILVIAITFACYVQQRRKLQHIKNNYFQQHGGLILFEEMKSQQ GHAFKIFSEEELQQATKKFNEQEILGQGGNGIVYKGLLKSNSEVAVKKCMTIDEQKKK EFGPMLVYEFIPNGTLFHLIHENHGNHISLITRLRIAHESAEALAYLHSCASPPILHG DVKSSNILLDNNFSAKVSDFGASILAPTDEMQFVTLVQGTCGYLDPEYMQTCQLTDKS DENKLEDMLNDQIKNNENMEFLEEMAELARKCLDMSSINRPSMKEIGDELGRLRKVME HQCARQNPEEMESFLGDSSYVINSTVESTKSFSIEKNAMKRLKSGR</aaseq>

Gene Sequence

<dnaseqindica>3693..4004#3237..3580#2833..3159#1220..1378#1038..1135#1..77#atggcgggcggcatgagcgatggatccggtgccgcgacgacagcgggcggcgtgggcgatggatccgacgccggcgggtggcgggggcgatgaatccggcaccgtgcggcggtgggctagggtttgggatattttggatttttatttttttttgtttgctgaatttattttcgcatgcggctggtataagcaaccgcatgcggttgggccggccgcatgcgaaaagggtgatttttttgcagaccttctcgcatgcaaagatgccttttgctcgtatggaaaaagccttttttactagtgtacaactgaggtgatgtcttctgtacttttggcacatttaacatgaaaaagtaaaaaaaaaagaaaatggtatgttgaaggattgaatgataactcaggtgatatatattatacttttattcttcttagtatctcaaagtccattatattaggaacaaataaatgggataatatttgacggatagagtattaaaaagtatggtagctctcactaaatttctcacagaggctcattggggttagtccacaataatatttgcctgatttagcagatttttgttgcaatttgttttactatataataataaaataaaacatgcctggtgacaatgtcttcttagtcgtagccaatgtataatcagctattgcttctagtattgactatatattacctatatatatacaacatgcctgcaggttgtaacaggttgtgtatcaaaatgcgaacgtgcccttaaggatggtgaatgctctggtgatggttgctgccaagttgatttcccgacaaagggatggcgttatagtactactttcgatagtgaaaactataataccagtctaatatggaggaacaacccgtgcagctatatggcagtgatagagaccacagctttcaaattccactatattctatgacacatataatggggcagctcccgttgtcctagactggatcatatatcaatggatgtatgtgatattgctataaaaaacaccacttcatatgcgtgtattagtggaaacagtaactgtgtcgatgatataaagggaggttaccgttgcaagtgctcccatggatacgaaggcaacccatacattaaagatggatgcaaaggtacagctatgcgctatatattaatacattcatataagatagcagaaatattaatgttaaccaagcgtggtggttttatttcagatatcaatgagtgccttgacaacgctacttacccatgcatgggaatatgcaagaatacgatagggagtttcgattgctcatgctacccaggaagttatatgaagaatggattctgcctgcctaatcaaaagtccacttttcctgctaggcatgtaataggtataggctcctttcttccgtacaaaaagataattacatgtgtgggcatcaacctgaaagtagtaattaaagattgcgcccacattactcactcaatccttgatttcaaatacaagagctcatcattacgaattgagaattttcttttgtttaaagaacatacgaagaggtactataatttttagcgtaaaatttgatatattatatcttgttaactgagatattaaaaggtacaaaatttgtaatagagaatacgctaccttcttaaaaaaaggtacacgaaagcttttgttatgataaacttttggctatatcattttcacgtatatacctgaaacctacactttaaataataaataattaaacacattctttctgactggagggagtagaattagattcatagttacttgaataaataatatccctctcatgaatgaatgattgatcatttttattgtattaatgaatgcggacaagtgcattttaatgtacgatcttaaacttgcgtagcagtataaaacgaccaatatttgatattagatggagtaaaataaagtctatgtgacttcgtatcacgaaacttcatggttacccatgagatattattgctagcagctttatctagtattgtacacacagttttctaccattttattcaaaaagaacttgtttaaatagcctaaaacaaacaagatccaagccaagatcgcataacctaaacaaggaccaaataatcattaggccatgcatggatcttggtcgtgtttgccatggatcttggtcgtgtttagttgttttggcaaaaatattttgactatacggacacatagggttgttttggtttgataccaaaaaatatgccctaccaatttataaacaaattgaatactatatgtgttagtttggattgagccaaatatttgatagtgccccaatcctatttggtcatatcctagaagtttcttccttatacaatgagaatttggctttatattggtaacaatccaaatgattgctaaataattttaccctaccaatattttggtagtgccaaagtttgcctagactttggcactaccaatgaattggtagggtaaagaaccaaacaagtccatatttaaagtattaaacgtagactaataacaaaacaattacatatttcacctgtaaactgcgagacgaatctattaagcctaattaatccgtcattagcaaatgtttactgtagcaccatattgtcaaatcatggagtaattaggctcgaaagatttgtctcgcaatttacatgtaaactgtataattggtttttttcgtccacatttaatgcttcatgcatgtgtccaaacatttgatttgacgaaaaagttggaagtttgaagggaactaaacacagcctttctgtacatttcaaaaaaaaaatcataactctagtttacttttgaattgtgcaggtgcaagtgttgggttcgtcatcctagtgattgccataacttttgcatgctatgtccaacagagaagaaaactacaacatataaaaaacaattattttcaacagcatggtggtctgatactatttgaagagatgaaatctcaacaaggtcatgcattcaaaatcttctccgaagaagaattgcaacaagcgacaaagaaatttaatgaacaagaaattctaggccaaggaggcaatggaattgtttacaaggggcttctcaagagcaactctgaagtagctgtcaaaaaatgcatgacaattgacgagcaaaagaagaaagagtttggtaaagaaatgctaatcctatcccagaccaaccacaaaaacattgttaaactattaggttgttgcctcgaagtggaggtcccatgcttgtgtacgagttcatcccgaacggtacactcttccatctcatccatgaaaaccatggtaatcacatctctctaatcactcgccttcggattgcccatgagtctgctgaggcgcttgcctacctccactcttgtgcttcaccaccaatcctacatggtgatgtcaagtcatccaacatcctccttgacaacaacttctcagcgaaagtctcagacttcggtgcttctatcttggctccaacggatgagatgcagtttgttacgctagtccaaggaacttgtgggtatcttgacccagagtacatgcaaacatgccaattaacagataagagtgatgtatagcttcggagttgttcttctcgaacttctcacacgcaagaaggcatgcaaccttgatgcaccagaacatgagaaagtcttgtcgatgatgtttctctctgcgatgaaggagaacaagctcgaggatatgttgaatgatcaaattaagaataacgagaatatggagtttctggaagaaatggcagagttagcaagaaaatgcttagacatgtcttccataaataggccatcaatgaaggaaattggagacgaacttggtaggctaaggaaggtcatggaacaccaatgcgcaagacagaacccagaagagatggagagctttcttggggattcatcttatgtgatcaactcaactgttgagagcacaaaaagtttcagcattgagaagaacgctatgaagcgtctcaaatcagggcgctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0373800, RefSeq:Os09g0373800