Os09g0376800

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Revision as of 07:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0376800| Description = Similar to Trehalose-6-phosphate synthase (Fragment)| Version = NM_001069580.1 GI:115478902 GeneID:4346917| Length =...")
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Gene Name

Os09g0376800

Description

Similar to Trehalose-6-phosphate synthase (Fragment)

Version

NM_001069580.1 GI:115478902 GeneID:4346917

Length

4071 bp

Definition

Oryza sativa Japonica Group Os09g0376800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13250715..13254785

Sequence Coding Region

13250715..13252262

Expression

GEO Profiles:Os09g0376800

Genome Context

<gbrowseImage1> name=NC_008402:13250715..13254785 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13250715..13254785 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtttcaaagtcatatacaaatcttctagatatgagtggtgaagatgtgtttgactttcagcaaccatttagatcgcttcctcgttttgtgacttccccaagcatcacatctaatcctgattgggatacaagtaatgctgatgattcagttggtcctgcatcttgctgtgtaaggaaaataatcgtctccaactttcttccactaaactgtaccaaagatgaagctactggacagtggtccttctcaatggatgacaatcaacttcttgttcaacttaaagatggatttccaatggagagcgaagttgtttatgtgggtagcttgaacgctgaagttgatcctggtgagcaagatcaactttcacagaaacttttcagagaatacaaatgcatacctactttcctcccagctgacctccagcagcagttctatcatggattctgtaaacaacaattatggccacttttccattatatgcttcctatttgcctcgacaaaggcgagctctttgaccgctctctatttcaagcctatgttcgggcaaacaaaatatttggtgacaaagttatggaggccatcaattcagatgatgactgtgtgtgggttcatgattatcacctcatgcttctcccaacctttttaagaaaaaagcttcatcgcatcaaaattggtttcttccttcacagtccatttccctcctctgaaatctataggacactgccagtaagagatgaaattttgaagtctcttctgaatgctgatctcattggctttcaaacatttgactatgcccgccacttcctttcatgttgcagcagattgttaggccttaattacgagtcaaaacgtggtcacatcggtatagagtactttggccgtacggtgagcctcaagatccttgctgtgggtgtacatgttggtcgtcttgagtctgtgttgaggctgcctgccacaattagcaaggttcaagaaattgagcaaagatataagggtaagatggtgatgttgggtgtagatgatatggatatcttcaaagggatcagtctaaaattgcttggcttggaatttcttttggagagaactccaaagctaagagggaaggttgtccttgtgcagattataaatcctgcaagaagcactggaaaagatgtggaggaagcaataaatgaagccgtctctgtagctgaaaggataaacattaagtatggttctgctgagtacaagcctgtcatccttatcgactaccccataccttcttatgagaagattgcatactatgctgcatctgattgctgtattgtaaatgctgtgagggatgggatgaacttgataccatatgagtatactgtctgcaggcagggaaatgaggagattgataagctcagaggtgttgataagagctcacatcacacaagcacactaattgtgtctgagtttgttggttgctccccatcacttagtggtgctttcagggtaaatccttggagtattgaagatgtagctgatgcattatataaagcaatggatttgactcaatcggagagg</cdnaseq>

Protein Sequence

<aaseq>MVSKSYTNLLDMSGEDVFDFQQPFRSLPRFVTSPSITSNPDWDT SNADDSVGPASCCVRKIIVSNFLPLNCTKDEATGQWSFSMDDNQLLVQLKDGFPMESE VVYVGSLNAEVDPGEQDQLSQKLFREYKCIPTFLPADLQQQFYHGFCKQQLWPLFHYM LPICLDKGELFDRSLFQAYVRANKIFGDKVMEAINSDDDCVWVHDYHLMLLPTFLRKK LHRIKIGFFLHSPFPSSEIYRTLPVRDEILKSLLNADLIGFQTFDYARHFLSCCSRLL GLNYESKRGHIGIEYFGRTVSLKILAVGVHVGRLESVLRLPATISKVQEIEQRYKGKM VMLGVDDMDIFKGISLKLLGLEFLLERTPKLRGKVVLVQIINPARSTGKDVEEAINEA VSVAERINIKYGSAEYKPVILIDYPIPSYEKIAYYAASDCCIVNAVRDGMNLIPYEYT VCRQGNEEIDKLRGVDKSSHHTSTLIVSEFVGCSPSLSGAFRVNPWSIEDVADALYKA MDLTQSER</aaseq>

Gene Sequence

<dnaseqindica>2524..4071#cgagtcttacaaacatttcttctcctctctctctctctctctctctcaactccaccacatttgtctgtgttcttgctgtctcttcttctcctacttcctctactcgattcgaggtttggctgctgctgctgttgctgctgatagtggtggtggtgggtgggagcagaagcagaagcaggaggcaaagaaaatctcgaggaaggaagcagaagaagcagccaagaaacgccgccatctcatctggatgcgctgaatctatctgccgcggtggaggtgagaatcggtcgctctccttattgatccccctccgtttctgctcttgacttggttttcgccttgtttggaaaaaaaaagggtgttttttttgggtgtcgagatggggattagtggaggaaaggaacgatcttggtcctttggggttttagttttgatcgattttatgttcttcgccgattttttttttgttcttttacgccattagttttgcctgcaggggaattgatgtggttttaggcgttgggttgggggatgaaatgttggtgtgcactgaaaagggggcttcttttttttttcttttttgctactgcttttttttttttacctgagtgcacttagtgcttatcatttgcatttacgtgtagcaattggcagttatcttaactgcaagagggggaaaaaaggtagcacaaatcttttagccgtcatgctattgccatgtagtggtatgaactgtttgtgatttatatcacccttgttatttaaccccaagaaatgatctggatggtagactcattccaaaagaaattattcaaggtgagatgatataggtagttctgggacaacatctctgggtagcccttaaagttcatatcatatcaagagcatgaagttataagagtagttcttctcatctgactgatgtgtgatatggtgacgattgagtttttgcttgtggtctcacaattatgggcaattttagggaagtaggcaggtgatgttgtctccgggacaatttaatttcccggatataattcatggcacattgaattcaataattcaagtagtaccttcttgtggtatgaccttggtccagttaggtgtgctctcaggatacagctcacagccacaccgaatggtagtatttttttttattttttagataatggaagctttattgaactcagtcaatagtatatcaggcatagttgttgtcctgtgagagactgtaatggagcatgcaaatagaatggacttttggacaaacactgatcaagttaatgataatgccagttgcattcaggacagtatttccgctgtaggatggatgcaatttggatagattaagtttcctttggtcacgttgctcgtctttggtctatgctaatatgttttaggatagatttcactgggtaggtattgaagtttctataagctggttccattgacttaattgcaagttctgtatgccaggtaacactggtagatacattttggtatcaaaggtaacattatactatagttatatgcctatatttatgattggctagaacttagaaggggaaatgattagattgcatgttgtttgtgtcatgctaatggaaggtggtggtccttgaattcgtacttttgtgttattttggtaggagagtgtggttcaatgttcttaaatgatgtttggagtggatatttgtggtcctaaacaagaagtagatgtgcttcattttggatctttggagagctcattgtcatgaaaaaaaaaatgagatgtttccatttacagtgaaagaacagtttacatgtcggcacatcttttcccctggagcaaataagccatttgacacaataagtaaattgtgattagcagtctctttattctttatcacctatacatccagtggagaattttgttccatgtgctctcttgtgggaactaattttattttggtgttcaaacataaattccctgaaaattgactaggcagttttgtgagcttccatgcaactattgagaatggatagcagttatgtataaagttagtttttcaacttagataaattgacctgcacaactggcagtgtgctctaggctctaacatactacatagatttttttttgaaaggatactacatagattttttatccttcaaaatccaaaattcgacttaaaaatacatcttaagaagcttttatggttatgtttgccttgtaacactcaatggttccagctttgttgtaattaggatccaccatattgaggcttgtttttaaaaaggaattcttttttggtctctgttttgatagtctatatcacgtgtcatagttttgtgatatataattaatattttagttaaccaaataatttacatagaaatgagcttactagtgtttctgcgttcgataaaataactatggcttcatcataatatttttgtaatttaatgcccctgctagaacatgtatttatttcaaaggactaaaatgtattctttgatgttttctttgttgcaaaaggttgtggaatcatggtttcaaagtcatatacaaatcttctagatatgagtggtgaagatgtgtttgactttcagcaaccatttagatcgcttcctcgttttgtgacttccccaagcatcacatctaatcctgattgggatacaagtaatgctgatgattcagttggtcctgcatcttgctgtgtaaggaaaataatcgtctccaactttcttccactaaactgtaccaaagatgaagctactggacagtggtccttctcaatggatgacaatcaacttcttgttcaacttaaagatggatttccaatggagagcgaagttgtttatgtgggtagcttgaacgctgaagttgatcctggtgagcaagatcaactttcacagaaacttttcagagaatacaaatgcatacctactttcctcccagctgacctccagcagcagttctatcatggattctgtaaacaacaattatggccacttttccattatatgcttcctatttgcctcgacaaaggcgagctctttgaccgctctctatttcaagcctatgttcgggcaaacaaaatatttggtgacaaagttatggaggccatcaattcagatgatgactgtgtgtgggttcatgattatcacctcatgcttctcccaacctttttaagaaaaaagcttcatcgcatcaaaattggtttcttccttcacagtccatttccctcctctgaaatctataggacactgccagtaagagatgaaattttgaagtctcttctgaatgctgatctcattggctttcaaacatttgactatgcccgccacttcctttcatgttgcagcagattgttaggccttaattacgagtcaaaacgtggtcacatcggtatagagtactttggccgtacggtgagcctcaagatccttgctgtgggtgtacatgttggtcgtcttgagtctgtgttgaggctgcctgccacaattagcaaggttcaagaaattgagcaaagatataagggtaagatggtgatgttgggtgtagatgatatggatatcttcaaagggatcagtctaaaattgcttggcttggaatttcttttggagagaactccaaagctaagagggaaggttgtccttgtgcagattataaatcctgcaagaagcactggaaaagatgtggaggaagcaataaatgaagccgtctctgtagctgaaaggataaacattaagtatggttctgctgagtacaagcctgtcatccttatcgactaccccataccttcttatgagaagattgcatactatgctgcatctgattgctgtattgtaaatgctgtgagggatgggatgaacttgataccatatgagtatactgtctgcaggcagggaaatgaggagattgataagctcagaggtgttgataagagctcacatcacacaagcacactaattgtgtctgagtttgttggttgctccccatcacttagtggtgctttcagggtaaatccttggagtattgaagatgtagctgatgcattatataaagcaatggatttgactcaatcggagagg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0376800, RefSeq:Os09g0376800