Os09g0379600

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0379600| Description = Homeodomain-like containing protein| Version = NM_001188881.1 GI:297726892 GeneID:9266289| Length = 2103 bp| Defini...")
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Gene Name

Os09g0379600

Description

Homeodomain-like containing protein

Version

NM_001188881.1 GI:297726892 GeneID:9266289

Length

2103 bp

Definition

Oryza sativa Japonica Group Os09g0379600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13385587..13387689

Sequence Coding Region

13385587..13386036,13387279..13387689

Expression

GEO Profiles:Os09g0379600

Genome Context

<gbrowseImage1> name=NC_008402:13385587..13387689 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13385587..13387689 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaggccgagctgcggcggcggcggcggaagaggccgttcctgacgacgacgcacgacgagctggagctccagatggaggacctcgtcgacgagctgtacggcgtcgacgagcaggggtcgtcgtcagcggcggcgaggaagcggcggctgacagcggagcaggtgcgagcgctggagcggagcttcgaggaggagaagcggaagctggagccggagcggaagagcgagctggcgcggcgtctcgggatcgcgccgcggcaggtggccgtgtggttccagaaccgccgcgcgaggtggaagacgaagcagctcgagctcgacttcgaccgcctccgggccgcccacgacgagctcctcgccggccgcaccgcgctcgccgccgacaacgagagcctccgatctcaggtgatcctattaaccgagaagctgcaagctaatgggaagtcaccgtcaccgtcgccggcgccggcggagcaaaccgccgtgccagccgcacctgaaagcgccaagtcgtttcagctcgaagaaggtcgccgcctctacgacgccgccgggagcaccaccaccaccaacggcggcggcggcggcgtcgcgatgccggcggcgcgcgtggcggcggcaagagcggccagcaacgacagccccgagtcctacttcgccggcgctcgctcgccgccctcgtcgtcggaggacgactgcggcggcgccggcagcgacgacgactacccctcttcctccgtcttactcccggtcgacgctacgctcgtcggcgacgccttcgagcacgccgtggcggcgacggtggcggcggatgaggaggcgccgctaaacagctgggagtggttctggaattga</cdnaseq>

Protein Sequence

<aaseq>MEEAELRRRRRKRPFLTTTHDELELQMEDLVDELYGVDEQGSSS AAARKRRLTAEQVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWK TKQLELDFDRLRAAHDELLAGRTALAADNESLRSQVILLTEKLQANGKSPSPSPAPAE QTAVPAAPESAKSFQLEEGRRLYDAAGSTTTTNGGGGGVAMPAARVAAARAASNDSPE SYFAGARSPPSSSEDDCGGAGSDDDYPSSSVLLPVDATLVGDAFEHAVAATVAADEEA PLNSWEWFWN</aaseq>

Gene Sequence

<dnaseqindica>1654..2103#1..411#atggaggaggccgagctgcggcggcggcggcggaagaggccgttcctgacgacgacgcacgacgagctggagctccagatggaggacctcgtcgacgagctgtacggcgtcgacgagcaggggtcgtcgtcagcggcggcgaggaagcggcggctgacagcggagcaggtgcgagcgctggagcggagcttcgaggaggagaagcggaagctggagccggagcggaagagcgagctggcgcggcgtctcgggatcgcgccgcggcaggtggccgtgtggttccagaaccgccgcgcgaggtggaagacgaagcagctcgagctcgacttcgaccgcctccgggccgcccacgacgagctcctcgccggccgcaccgcgctcgccgccgacaacgagagcctccgatctcaggtgagtgagacggatcacaggactgagatcatctaccttcaaaatcatcgtttcttttttatcactgatatgtggattcagaattcatccgactcacgtatcagtgacaaactcgcgtgattttaaagatagatgattctaaccccgagatacatcatagtcagggccactaattattaaggcctcacttttagaaaaagaatttttaggtttaaacaagaattgagattttttataatatattttaatttatatgactccattaactttaaatcgtaagtttaattatttgtataataagaaaattatgcaaataaaaatcataagttgggcttaaaatacttttagtaatagtcaccataaataaattatacttagattttctttagaaaaataagatgagtggtcaaaccgtccaacgtagaaacaattttacatcgtttgttgatcatcaaagggaaccgaagataatcattttctgacgatcacacagtcataaaaacagttttacatcgttgtatcgtatctatagtccgtagaggtatattattagcagctttagataatttaatagataatataatactgcacgagctgtttctatcaccgtgtctttgtggaaaactcatacataaaaatagcaaatgttaaaccattattcataccttgaaacgcatgttcacaactcaatcattattttagataagccaagtgtcatatttaatagacgtcgtattacttatgttgttattcttcatttttgacaatagtagacttgaagtggataaaaggatcatcaatgtactaccatcccccctctgagcaatcataccacttcagggtttaatatcgaacgtaatttctgaaatttccaaaaaatagaccgggtctattcgtccctcgacagaatattatatcggccaaattagtaaaattcttatgaacttaatttatatttaatcaatttttttttgaatttcaacttattttgggtccaaattttgaaattttatttctatcggtttatgcaaaccgcgatatgtagaatcttacaacttaattccattatggataagaaatgacctcaagattttattagtgggctcaatgtgtttggcaaaatacggacagtccatttgacttgtcatttgcactaatcgcaattcgatcatgtgtacttttcaacaatatggagtcaaggaaaatgaattttgatcatgatgtaaatgtgccacgtggcaggtgatcctattaaccgagaagctgcaagctaatgggaagtcaccgtcaccgtcgccggcgccggcggagcaaaccgccgtgccagccgcacctgaaagcgccaagtcgtttcagctcgaagaaggtcgccgcctctacgacgccgccgggagcaccaccaccaccaacggcggcggcggcggcgtcgcgatgccggcggcgcgcgtggcggcggcaagagcggccagcaacgacagccccgagtcctacttcgccggcgctcgctcgccgccctcgtcgtcggaggacgactgcggcggcgccggcagcgacgacgactacccctcttcctccgtcttactcccggtcgacgctacgctcgtcggcgacgccttcgagcacgccgtggcggcgacggtggcggcggatgaggaggcgccgctaaacagctgggagtggttctggaattga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0379600, RefSeq:Os09g0379600