Os09g0396300

From RiceWiki
Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0396300| Description = Peptidase C15, pyroglutamyl peptidase I family protein| Version = NM_001069635.1 GI:115479012 GeneID:4346976| Length...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0396300

Description

Peptidase C15, pyroglutamyl peptidase I family protein

Version

NM_001069635.1 GI:115479012 GeneID:4346976

Length

2997 bp

Definition

Oryza sativa Japonica Group Os09g0396300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14467394..14470390

Sequence Coding Region

14468695..14468961,14469113..14469217,14469296..14469343,14470032..14470262

Expression

GEO Profiles:Os09g0396300

Genome Context

<gbrowseImage1> name=NC_008402:14467394..14470390 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14467394..14470390 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttcagaaggaccttcagttgttactgtacatgtgactggatttaagaagtttcatggggttgctgagaacccaactgagaaaattgtgaccaatcttaaatcattcgtggaaaagaaaggattgccaaaaaaccttgtgcttggaagctgcacagttcttgaaactgcagggcagggggcacttggcacattatataaggttttggaatcttccattgcggaaagggagaatgggtcatcggctcaggggcaagtaatttggatccactttggagtcaatagtggtgcaacaaggtttgctcttgagaatcaagctgttaatgaagccaccttccgttgtccagatgagctagggtggaaacctcagagggctcccattgtgccatctgatggaggaatctcacgcacaagagagactacccttccggtaaatgagttaaccaagtcactccggaagacaggctatgatgtaatgccatcagacgatgctggtcggttcgtatgcaactatgtgtattatcactctcttcggtttgcagagcaacacggcatcaaatctctgtttgtacatgtgcccctgttcttgacgatcgatgaggaggtccagatgcattttgttgcttcccttctcgaagctctatcttga</cdnaseq>

Protein Sequence

<aaseq>MGSEGPSVVTVHVTGFKKFHGVAENPTEKIVTNLKSFVEKKGLP KNLVLGSCTVLETAGQGALGTLYKVLESSIAERENGSSAQGQVIWIHFGVNSGATRFA LENQAVNEATFRCPDELGWKPQRAPIVPSDGGISRTRETTLPVNELTKSLRKTGYDVM PSDDAGRFVCNYVYYHSLRFAEQHGIKSLFVHVPLFLTIDEEVQMHFVASLLEALS</aaseq>

Gene Sequence

<dnaseqindica>1302..1568#1720..1824#1903..1950#2639..2869#agaaaagaaaaaaaaagaaaagaaaaagaaaaaccgagtcgtctcgtctccattgcggcggcgcgagctttggactcgtcgtctccgtcccgcgcgcgacgagcgcgaccagcggccgccggcgtctgctgcttgctcgcttgcttgcttccgccccgccggcgccctcgcttcgctgtccgctgtggtgagcatctccgtccgccacgcgccatcccacactcttttttttttctcgaatttgcgttagccttactagcttctctttctagatctggaagctgtttgtctctcaatttttgccttaaaccctccctagtactaatcgcattttagtttgttcccaaaaggggaaaaaaagagagaaagaattgactatttgggaacaaatgggagtaggtctgcccctgtaaaaatgtgtgttttgtatacagtttcagtgcaattacgcctgcgagatgaagtgatttcagtgatctgttcaagaacggcaggtataggagagcagccgatggttcagttccgaattggttgtggcaatgctagatggcaaggtagcaactagcaactgcttgtttagtttcttctgaggttggagcttcaccgtttggaagacatttatgctcttgattttgtggtcactggtcaggcttgcctttgcagagacgataggcatctgatatgtgctatggctttcagacttttgtactttggtgcctatgtgtagttagtgttgaacttggataacgttctcgtcggttgaaccccagcattattaggttacagtaagtcagtaactagttgttttttttgcattctgtgagattctattgtttggtgagttgttcactgcttaataaaatctttagaacaattattgcctttctttttgaaagaaacaatgagattgtggttcttaatacaacatctgtgcagataagaaaaatcatatggttcttgtttaaatttgttcagggatctgacattttctactgttacagtgttacagatttttgtgtgccctgttgttaacttttcttcatgttgtaatgcttggacccctatccttggggcagatgaaactgtctgctatagtttcttctgcttgcctgatgcttaagatttttaacaagttgtacatcctcaatgacacgcaagccttttacgtactcatgaaaaaaatttggtgttcacatcctgctttttgtctggtgtagtttatgtcttactaatccatttgttgatctttgttcagttcaggattttgggataaggctatttgttatttctcaaaagtgtaaatgggttcagaaggaccttcagttgttactgtacatgtgactggatttaagaagtttcatggggttgctgagaacccaactgagaaaattgtgaccaatcttaaatcattcgtggaaaagaaaggattgccaaaaaaccttgtgcttggaagctgcacagttcttgaaactgcagggcagggggcacttggcacattatataaggttttggaatcttccattgcggaaagggagaatgggtcatcggctcaggggcaagtaatttgggttagtatccacctttcttgattccacatcagatactgctgtaatgcagtcggcaccttgcatattgcaatgctctcctgtctgaaaaataactatttgccttcaatgccactcagacagttgaattaattatcattcgaaaaatgttcagatccactttggagtcaatagtggtgcaacaaggtttgctcttgagaatcaagctgttaatgaagccaccttccgttgtccagatgagctagggtggaaacctcaggttgcgggttcatccatttactcctctctgtctatatatatcgacactgtgttttaccggtttgatggttccatgcagagggctcccattgtgccatctgatggaggaatctcacgcacaagagaggtatatgttaaaactttcatctgaaaattaatgatgtttgaagtatagctacaaacagcacaattacttgtttcttttttagtttccacataattctatggctatgagcccacaagactccctcccattgaaagaaaaaaaaacaaattgcaaagtagaacaccaaagattgttaagtctgctgcaataaattcacttactttgcaaagtagaacaccaaagattgttaagtctgctgcaataaattcactttcttcacagttaccttgttactaccttagagccacaagggcgagtttcagaagcactattgaatatttcttttgttcatttttctttccatcaaacaaaatcagttagctgtaaattcaaaagaacaatggtaatctgtgattgcctgattacagcaaagtacaaacttttatacagaaataaatcacagatacccccccctgttcttttcaccagatgttcagaacacccatcttttctgtttacaaacttatcataaaagaaacgaatgtaagttcagtttgttgcctgcacagtaacgcaagcatggatagttaatatccacattatattgaatgaatgcagcttcaatcatcagatatttcatgtcttggattgagagcattgtgaatcttgagactaatcatgttcttctgaactcctcatgaatgagcagactacccttccggtaaatgagttaaccaagtcactccggaagacaggctatgatgtaatgccatcagacgatgctggtcggttcgtatgcaactatgtgtattatcactctcttcggtttgcagagcaacacggcatcaaatctctgtttgtacatgtgcccctgttcttgacgatcgatgaggaggtccagatgcattttgttgcttcccttctcgaagctctatcttgaattaggaagaaaaatacaatttaaggttggaagcggactgaataaaattgtattgtcatcgatgatattggtcttgctccaacgggtgtatttaaggggaaatggctgcttagagtgtgttcttggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0396300, RefSeq:Os09g0396300