Os09g0399800

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0399800| Description = Cinnamyl alcohol dehydrogenase (EC 1.1.1.195)| Version = NM_001069644.1 GI:115479030 GeneID:4346988| Length = 1604 b...")
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Gene Name

Os09g0399800

Description

Cinnamyl alcohol dehydrogenase (EC 1.1.1.195)

Version

NM_001069644.1 GI:115479030 GeneID:4346988

Length

1604 bp

Definition

Oryza sativa Japonica Group Os09g0399800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14636692..14638295

Sequence Coding Region

14636904..14637900,14638098..14638180

Expression

GEO Profiles:Os09g0399800

Genome Context

<gbrowseImage1> name=NC_008402:14636692..14638295 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14636692..14638295 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcacgacggcacggcggcgctcggctgggcggcgcgggacgcctccggccacctctcaccgttcagcttcacaagaagggttcaggaggaagacgacgtgacgatcaaggtgctctactgcggcatctgtcacaccgacctgcacaccatcaagaacgagtggggcaacgccatgtaccccgtcgtccccggccacgagatcgtcggcgtcgtcgccggcgtcggcgccggcgtgaccaggttcaaggccggcgacacggtgggcgtgggctacttcgtcgactcgtgccgcgcctgcgacagctgcggcaagggggacgagaactactgcccgacgatggtgatcacgtcgaacggcacggactacggcggcgccaccacccagggcggtttctccgacgtcatggtcgtgaggcaggactacgtgttgcgcgtcccggcgagcctgccgccggacggcgcggcgccgctgctgtgcgccggcgtgacggtgtacagtccgatggtggagtacggcctgaacgcccccgggaagcacctcggcgtggtcggcctcggcgggctgggccacctgggcgtcaagttcggcaaggcgttcgggatgaaggtgacggtgatcagctcgtcgccggcgaagcgggaggaggcgctggagcggctcggcgccgacgcgttcctgtcgagccgcgacggcgaggggatggcggcggcggcggcgacgatggacgggatcatcgacacggtgtccgcggggcacccgctggtgccgctgctgtcgctgctgaagcccaaggggcagatggtggtggtgggcgcgccggcggcgccgctgcagctgcccgcgatcgccatcatcgatggcgggaagcgcgtcgccgggagcggcgggggcagcgtggccgagtgccaggcgatgctggacttcgccggcgagcacggcatcgccgcggacgtcgaggtggtcgccatgggcgacgtcaacgccgccctcggccgcctcgagaggaacgacgtgaggtaccgcttcgtcatcgacgtcgccggcaccctgcacgccgccgccgcgccgtcctag</cdnaseq>

Protein Sequence

<aaseq>MEHDGTAALGWAARDASGHLSPFSFTRRVQEEDDVTIKVLYCGI CHTDLHTIKNEWGNAMYPVVPGHEIVGVVAGVGAGVTRFKAGDTVGVGYFVDSCRACD SCGKGDENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVLRVPASLPPDGAAPLL CAGVTVYSPMVEYGLNAPGKHLGVVGLGGLGHLGVKFGKAFGMKVTVISSSPAKREEA LERLGADAFLSSRDGEGMAAAAATMDGIIDTVSAGHPLVPLLSLLKPKGQMVVVGAPA APLQLPAIAIIDGGKRVAGSGGGSVAECQAMLDFAGEHGIAADVEVVAMGDVNAALGR LERNDVRYRFVIDVAGTLHAAAAPS</aaseq>

Gene Sequence

<dnaseqindica>396..1392#116..198#ctatttaatcctgtatcacgcccagattcctgagtccaaaaccaactactgatagtctaatagtatcgatcactgaggaagaagagcatagcaaaagagtggtcgatcgtcatcaatggagcacgacggcacggcggcgctcggctgggcggcgcgggacgcctccggccacctctcaccgttcagcttcacaagaaggtcataattaactactacttcctccgtcctaaaatgttgttaactaggatttgtctagatttgttgtcttaggaatcccatcatagatagcaacattttaggatggaagtagtatatatctctgtcttgtgctcaccgtcgtcgtttcgatctgccatgggcatcactgaactttgcgacggtgatgtgtggtgcagggttcaggaggaagacgacgtgacgatcaaggtgctctactgcggcatctgtcacaccgacctgcacaccatcaagaacgagtggggcaacgccatgtaccccgtcgtccccggccacgagatcgtcggcgtcgtcgccggcgtcggcgccggcgtgaccaggttcaaggccggcgacacggtgggcgtgggctacttcgtcgactcgtgccgcgcctgcgacagctgcggcaagggggacgagaactactgcccgacgatggtgatcacgtcgaacggcacggactacggcggcgccaccacccagggcggtttctccgacgtcatggtcgtgaggcaggactacgtgttgcgcgtcccggcgagcctgccgccggacggcgcggcgccgctgctgtgcgccggcgtgacggtgtacagtccgatggtggagtacggcctgaacgcccccgggaagcacctcggcgtggtcggcctcggcgggctgggccacctgggcgtcaagttcggcaaggcgttcgggatgaaggtgacggtgatcagctcgtcgccggcgaagcgggaggaggcgctggagcggctcggcgccgacgcgttcctgtcgagccgcgacggcgaggggatggcggcggcggcggcgacgatggacgggatcatcgacacggtgtccgcggggcacccgctggtgccgctgctgtcgctgctgaagcccaaggggcagatggtggtggtgggcgcgccggcggcgccgctgcagctgcccgcgatcgccatcatcgatggcgggaagcgcgtcgccgggagcggcgggggcagcgtggccgagtgccaggcgatgctggacttcgccggcgagcacggcatcgccgcggacgtcgaggtggtcgccatgggcgacgtcaacgccgccctcggccgcctcgagaggaacgacgtgaggtaccgcttcgtcatcgacgtcgccggcaccctgcacgccgccgccgcgccgtcctaggctcctagcaatgttgccttcgtgtcaacgtgcttgcgtgtcattgtgcggtcgtgtgtgtaaccgtgaaaggagaggcgtttggtaatggagcaataacgttgtttttggaccgtgatggtccgtgggcttgtgatgggttatgtgggccacctcgagttgggcccttctcttgtccgattctttgtccaaagattgaaataagttcatct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0399800, RefSeq:Os09g0399800