Os09g0401100

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0401100| Description = ABC transporter related domain containing protein| Version = NM_001069654.2 GI:297609427 GeneID:4346998| Length = 36...")
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Gene Name

Os09g0401100

Description

ABC transporter related domain containing protein

Version

NM_001069654.2 GI:297609427 GeneID:4346998

Length

3671 bp

Definition

Oryza sativa Japonica Group Os09g0401100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14700465..14704135

Sequence Coding Region

14700465..14700986,14701363..14701542,14701785..14702039,14702597..14704135

Expression

GEO Profiles:Os09g0401100

Genome Context

<gbrowseImage1> name=NC_008402:14700465..14704135 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14700465..14704135 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcagcagcagcgcagccgtgagatggccagggccggcgagccagccgccgcccaccgccaccgcgccgagagggccgccgccggcgagccggccacccgaactcaccggacagagagagccggcgagcctgccgcggccaccaccaccaccaccacccgccggccgccgccgacgacgacggagaggaaggagagcctggagagcctcctggacgcgacggacgccgcccgtggcggccgtcgcggcggcggcggcgtgaaggcggcggtggccagcaggcaagggctggagttcaagaacctgtcgtacagcgtggtgaagaagcagaagaaggagggggtgaaggtgaagaaggaggtgtacctgctcaacgacatctccggcgaggccccccgcgggcaggtgacggcgatcctcggccccagcggcgccggcaagtccaccttcctcgacgccctcgccggccggatcgccaagggcagcctcgagggctccgtccgcatcgacggccgagctgtcacgacgagctacatgaagcagatttcatcctacgtgatgcaagatgatcagttgttcccgatgctgacggtgctggagacgctcactttcgcagctgaagtgaggctgcccccatcactctccagagctgagaagctcaagcgagtctgggagctcatcgatcagcttggtttgcagacaacggctcacacgtacattggggatgaagggacccgaggagtctccggtggggaacgccggagggtgtcgatcggcatagacatcatccacaaaccttccctcctcttcctcgacgagccgacctccggtctcgactccaccagcgcgcacagcgtggtggagaaggtgaaggacatcgccagaggagggagcattgtgctcatgacgattcaccagccatctttcaggatccagatgcttcttgacaggcttgagtacgatgaatcaacatcggggcttgagcctctggttgcctaccagagggacggcacgaaacccgacggcgccgcgaaaactccggtgccaagaacaccgagaacgccgcaccagaagtcggtgcagttcaggcagatccaactcaagagcaaccagttctccctcaacagcggcgccgccaatggcaacaccttctccaacttcgagtcgtcgtacaatgtcgatggcggcggcgatgacgacgatgaggattttgataattcgctcgagaggaagttgcagacgccgatgcacgccggcggtccagcttcggggtaccagccgaggctggcgtcacagttctacaaggatttctcggtctgggtctaccatggcgtcaccgggagcacgccgcaccggcggccgacatggacaccggcgagaacgccggtgtcgagcttccagcgtggccgcgccgtgacaatgacgccaacgccgcagaacaacccgcagcggcggcctcctccgcctccgtctccacatgtgccggtgttcaagccggaggagccgacgtaccacgagtacgagcttgacctggagccgccgctggacgcgccggaagaggactacaacggcggccatcgtcccaagttcgccaacccgtggccgcgggaggtggcggtgctgtcgtggcgcacggtgctcaacgtggtgcgcacgccggagctgttcctctctagggaggtggtgctcgcggcgatggcggtcatcctctccaccatgttccgccgcctcggcgccggcgacgtcccgacggtgaaccggctgctcaacttctacatcttcgccgtctgcctcgtcttcttctcctccaacgacgccgtgccaaccttcatccaggagcggttcatcttcatccgggagcggtcgcacaacgcctacagggcgtcgtcctacgtcgtcgcctccctcgtcgtctacctccccttcttcgccgtgcaagggctcaccttcgccgtgatcaccaagctgatgctccggatggagagcagcctgctccacttctgggtcatcctcttcgcctccctcatcaccaccaacgcctacgtcatgctcgtctcggcgctcgtccccagctacatcaccggctacgccgtcgtcatcgcgacgacggcgctcttcttcctcacctgcggcttcttcctcaagcggacgctcatcccggtggggtggaggtggctgcactacgcctccgcgatcaagtacccgttcgaggcgctgctggtgagcgagttcaaggggggccggtgctacgccggcgaccgcgccgacctctcgccggggccgctcggggggttcaagcccagcagcctccggcgggagctcaacgccagcgacgcggcgtgcccgttgatggggcaggacgtgctctccacactggacatcaccattgacagcatctgggttgatgttgccatcctgcttgcatggggtgtcctctatcgcctcctcttctatgttgtcttgaggttctactccaagaatgagaggaagtga</cdnaseq>

Protein Sequence

<aaseq>MQQQQRSREMARAGEPAAAHRHRAERAAAGEPATRTHRTERAGE PAAATTTTTTRRPPPTTTERKESLESLLDATDAARGGRRGGGGVKAAVASRQGLEFKN LSYSVVKKQKKEGVKVKKEVYLLNDISGEAPRGQVTAILGPSGAGKSTFLDALAGRIA KGSLEGSVRIDGRAVTTSYMKQISSYVMQDDQLFPMLTVLETLTFAAEVRLPPSLSRA EKLKRVWELIDQLGLQTTAHTYIGDEGTRGVSGGERRRVSIGIDIIHKPSLLFLDEPT SGLDSTSAHSVVEKVKDIARGGSIVLMTIHQPSFRIQMLLDRLEYDESTSGLEPLVAY QRDGTKPDGAAKTPVPRTPRTPHQKSVQFRQIQLKSNQFSLNSGAANGNTFSNFESSY NVDGGGDDDDEDFDNSLERKLQTPMHAGGPASGYQPRLASQFYKDFSVWVYHGVTGST PHRRPTWTPARTPVSSFQRGRAVTMTPTPQNNPQRRPPPPPSPHVPVFKPEEPTYHEY ELDLEPPLDAPEEDYNGGHRPKFANPWPREVAVLSWRTVLNVVRTPELFLSREVVLAA MAVILSTMFRRLGAGDVPTVNRLLNFYIFAVCLVFFSSNDAVPTFIQERFIFIRERSH NAYRASSYVVASLVVYLPFFAVQGLTFAVITKLMLRMESSLLHFWVILFASLITTNAY VMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTLIPVGWRWLHYASAIKYPFEAL LVSEFKGGRCYAGDRADLSPGPLGGFKPSSLRRELNASDAACPLMGQDVLSTLDITID SIWVDVAILLAWGVLYRLLFYVVLRFYSKNERK</aaseq>

Gene Sequence

<dnaseqindica>1..522#899..1078#1321..1575#2133..3671#atgcagcagcagcagcgcagccgtgagatggccagggccggcgagccagccgccgcccaccgccaccgcgccgagagggccgccgccggcgagccggccacccgaactcaccggacagagagagccggcgagcctgccgcggccaccaccaccaccaccacccgccggccgccgccgacgacgacggagaggaaggagagcctggagagcctcctggacgcgacggacgccgcccgtggcggccgtcgcggcggcggcggcgtgaaggcggcggtggccagcaggcaagggctggagttcaagaacctgtcgtacagcgtggtgaagaagcagaagaaggagggggtgaaggtgaagaaggaggtgtacctgctcaacgacatctccggcgaggccccccgcgggcaggtgacggcgatcctcggccccagcggcgccggcaagtccaccttcctcgacgccctcgccggccggatcgccaagggcagcctcgagggctccgtccgcatcgacggccgagctgtaagatgaatcgatgatcatcaaacacccataaaattaacctacttcctctgtttccgtttcatgttacaagatgttttaactttggttaaaaccaaactactttaaatttaactaagtttaaagaaaaaataataacattttcaaccttagacaaatttattatgaaaatatatttaattattgatttaatgaaactaattcggtattataaatattactatatttgtttataaacttagttaaaaattagtttaactttgacctaagtcaaatcgtcttgtaacttgaaacgaagagagtatacagttctctcgttcttctgcataatcaagtacacaattaagatgatctcttgttcttgttgttaatttaggtcacgacgagctacatgaagcagatttcatcctacgtgatgcaagatgatcagttgttcccgatgctgacggtgctggagacgctcactttcgcagctgaagtgaggctgcccccatcactctccagagctgagaagctcaagcgagtctgggagctcatcgatcagcttggtttgcaggtaagtcaatcaaattaatccgatagagcagttttccgatacttgagaatgtaccaggtccaatttaataccgagagataccaaattttacattaaaaaaatacggtatccttagaaccgtaaaaatctctctaatctgaccattaaacaaataatatcgacagaattgtagctggttatactctacaagctaggttagcagcttgctcatttttactgacaatctgtgtgccaaattgcagacaacggctcacacgtacattggggatgaagggacccgaggagtctccggtggggaacgccggagggtgtcgatcggcatagacatcatccacaaaccttccctcctcttcctcgacgagccgacctccggtctcgactccaccagcgcgcacagcgtggtggagaaggtgaaggacatcgccagaggagggagcattgtgctcatgacgattcaccagccatctttcaggatccagatgcttcttgacaggcttgtcatcctcgcaaggtgacaaaactatttctccctccgtttcaggttataagatgttttgactttggtcaaagtcaaactgcttcaagtttgattaagtttatagaaaaaatagtaatattttttactcatgataaatttattattaaaatatatttaattattaatttaataaaattattttggtaatataaatattactatattcgtctataaacttggtcaaacttaaaacagtttgactttcaccaaagttaaaaccttatagactgaaacgaaacgagttatagatagtattccaaattgttagtgtctaattttaaaagtttgaccaaatcttgtctgaatgaccggaggaagtatctgcctaggtctagaattgtcttttgcttccaaaattccttttttgttcaatttaaaaatactgtcattgattcatccaggggaaggttgatctacctaggaagcccaagcacactgcaaacacacctggctggatttggcaggccggtgccggatggtgagaacagcattgagtatctcctggatgtcatcaaggagtacgatgaatcaacatcggggcttgagcctctggttgcctaccagagggacggcacgaaacccgacggcgccgcgaaaactccggtgccaagaacaccgagaacgccgcaccagaagtcggtgcagttcaggcagatccaactcaagagcaaccagttctccctcaacagcggcgccgccaatggcaacaccttctccaacttcgagtcgtcgtacaatgtcgatggcggcggcgatgacgacgatgaggattttgataattcgctcgagaggaagttgcagacgccgatgcacgccggcggtccagcttcggggtaccagccgaggctggcgtcacagttctacaaggatttctcggtctgggtctaccatggcgtcaccgggagcacgccgcaccggcggccgacatggacaccggcgagaacgccggtgtcgagcttccagcgtggccgcgccgtgacaatgacgccaacgccgcagaacaacccgcagcggcggcctcctccgcctccgtctccacatgtgccggtgttcaagccggaggagccgacgtaccacgagtacgagcttgacctggagccgccgctggacgcgccggaagaggactacaacggcggccatcgtcccaagttcgccaacccgtggccgcgggaggtggcggtgctgtcgtggcgcacggtgctcaacgtggtgcgcacgccggagctgttcctctctagggaggtggtgctcgcggcgatggcggtcatcctctccaccatgttccgccgcctcggcgccggcgacgtcccgacggtgaaccggctgctcaacttctacatcttcgccgtctgcctcgtcttcttctcctccaacgacgccgtgccaaccttcatccaggagcggttcatcttcatccgggagcggtcgcacaacgcctacagggcgtcgtcctacgtcgtcgcctccctcgtcgtctacctccccttcttcgccgtgcaagggctcaccttcgccgtgatcaccaagctgatgctccggatggagagcagcctgctccacttctgggtcatcctcttcgcctccctcatcaccaccaacgcctacgtcatgctcgtctcggcgctcgtccccagctacatcaccggctacgccgtcgtcatcgcgacgacggcgctcttcttcctcacctgcggcttcttcctcaagcggacgctcatcccggtggggtggaggtggctgcactacgcctccgcgatcaagtacccgttcgaggcgctgctggtgagcgagttcaaggggggccggtgctacgccggcgaccgcgccgacctctcgccggggccgctcggggggttcaagcccagcagcctccggcgggagctcaacgccagcgacgcggcgtgcccgttgatggggcaggacgtgctctccacactggacatcaccattgacagcatctgggttgatgttgccatcctgcttgcatggggtgtcctctatcgcctcctcttctatgttgtcttgaggttctactccaagaatgagaggaagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0401100, RefSeq:Os09g0401100