Os09g0401300

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0401300| Description = ZIM domain containing protein| Version = NM_001069656.1 GI:115479054 GeneID:4347000| Length = 4187 bp| Definition =...")
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Gene Name

Os09g0401300

Description

ZIM domain containing protein

Version

NM_001069656.1 GI:115479054 GeneID:4347000

Length

4187 bp

Definition

Oryza sativa Japonica Group Os09g0401300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14709841..14714027

Sequence Coding Region

14710214..14710409,14711866..14711923,14712033..14712393,14712491..14712575,14712682..14712953
,14713074..14713276,14713781..14713856

Expression

GEO Profiles:Os09g0401300

Genome Context

<gbrowseImage1> name=NC_008402:14709841..14714027 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14709841..14714027 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagggacttcctgggcgcgatcgggaaggacgaggagcagcggaggcatgcggaggagaggaaggaatcagattactttggagcaggaggaggagcggcagcggcggcgatggattggtcgttcgcgagcagggccgcgttgatgtcgttcaggtcgtcgtcgtcggcggcggcggcggcggcgagggaggagacgagggagctcgcgttcccacacttctcggcgttagacggcgccaagatgcagcaggcctcgcacgtcctcgcaagacagaaatcgtttggtgccgagagccacggcatcccgcagtacgccgccgccgccgccgtgcacggcgctcaccgtggccagccaccgcatgttctgaatggggctagagtgattccggcctcgtcgccgttcaacccgaacaatccgatgttcagggttcagagctcgcccaacctcccgaatgccgtcggcgccggtggtggcgcgttcaagcagccgcctttcgccatgggcaatgcggttgccggatctacggtcggtgtgtacggaacaagggacatgccgaaggcgaaggcggcgcaattgaccatcttttatgctggttctgtaaatgtattcaacaacgtctcgccggagaaggctcaggaactcatgttcttagctagcagaggatctcttccaagtgcgccgactaccgttgctcgtatgccagaggcacatgtctttcccccagcaaaagtcactgtacctgaggtttcgcctacaaaaccgatgatgcttcagaaaccgcagcttgtttcgtctcccgtgccagccatttccaaacctatctccgttgtgtcacaagctacaagtcttccacggagtgcctcaagctctaatgtcgactccaacgtgacaaaatcttctggtccattggttgttcctcccacaagtttgcctcctccggcccagcctgagacactagccactaccactgctgcagctattatgccgagagctgtccctcaagcgcggaaggcatcccttgcccgattcttggagaagcgaaaggaaagagtgacgaccgtggcgccatacccattggccaagagcccgctagagagcagcgacacaatggggagtgccaatgacaacaagtcatcttgcacggacattgccctctcaagcaaccgcgacgaatcattgtcattaggccagccaaggaccatcagcttctgcgaggagtcccccagtacaaagctacaaatctga</cdnaseq>

Protein Sequence

<aaseq>MERDFLGAIGKDEEQRRHAEERKESDYFGAGGGAAAAAMDWSFA SRAALMSFRSSSSAAAAAAREETRELAFPHFSALDGAKMQQASHVLARQKSFGAESHG IPQYAAAAAVHGAHRGQPPHVLNGARVIPASSPFNPNNPMFRVQSSPNLPNAVGAGGG AFKQPPFAMGNAVAGSTVGVYGTRDMPKAKAAQLTIFYAGSVNVFNNVSPEKAQELMF LASRGSLPSAPTTVARMPEAHVFPPAKVTVPEVSPTKPMMLQKPQLVSSPVPAISKPI SVVSQATSLPRSASSSNVDSNVTKSSGPLVVPPTSLPPPAQPETLATTTAAAIMPRAV PQARKASLARFLEKRKERVTTVAPYPLAKSPLESSDTMGSANDNKSSCTDIALSSNRD ESLSLGQPRTISFCEESPSTKLQI</aaseq>

Gene Sequence

<dnaseqindica>3619..3814#2105..2162#1635..1995#1453..1537#1075..1346#752..954#172..247#gtagtagtagaagaagcgtagagcggtcaaggctgcgtcgtcgtcgtcgtcgtcgtcaccggcagcggaggaggaggaggaggagagaaggttcagaggaggaggaggtagcgaggcacgaagtagcagcatctcatctcatctctccctggctggctggggggaaattcgatggagagggacttcctgggcgcgatcgggaaggacgaggagcagcggaggcatgcggaggagaggaaggaatcaggttagcttttctcgcgggaattcgctcgccttccctgtttcggggcgatttggcgcgccgcggcgggggggaatcttgaggaggggtgggtgagttcggcgagctaactgctggatgtggccatggccgccatggctcgtgaggcggagaagaaaagcgacatcctcctcttccatggattttgtgttggattttcttttctttgtttttcttttggggggaaaggaaaggtggtcgcgtttggtatggcggcctaattgctttcgatggctcactttgccgtgtacgctcgattcggggcgaagaaattcagcgaggatttctctccgggggagaaagccggccgaatctttctgccgctcgcgcgtgtcgctagtcgatttcgagtagtcgctgcttctgaaacgattgggatgcttaacggattcttggttgattgtgtcatatatatagagctgggcggatgagtattcgattgagtgtgtgtgcgtgcgcaattttcagattactttggagcaggaggaggagcggcagcggcggcgatggattggtcgttcgcgagcagggccgcgttgatgtcgttcaggtcgtcgtcgtcggcggcggcggcggcggcgagggaggagacgagggagctcgcgttcccacacttctcggcgttagacggcgccaagatgcagcaggcctcgcacgtcctcgcaagacaggtggcttgcgctgttcttcttcttcttgattttgttcttgctcacttgctgcttgtgaatttctgtttgatattgatatcctaattaattagtttgtggatatgtggatgttttttgcagaaatcgtttggtgccgagagccacggcatcccgcagtacgccgccgccgccgccgtgcacggcgctcaccgtggccagccaccgcatgttctgaatggggctagagtgattccggcctcgtcgccgttcaacccgaacaatccgatgttcagggttcagagctcgcccaacctcccgaatgccgtcggcgccggtggtggcgcgttcaagcagccgcctttcgccatgggcaatgcggttgccggatctacggtcggtgtgtacggaacaaggtagctaatccgctctgttatcgagcacgaggtttgtgacttttgtgagagtggaaatgaaagatgaaattggactgaaatatatagcttgtcttgctttgtatagggacatgccgaaggcgaaggcggcgcaattgaccatcttttatgctggttctgtaaatgtattcaacaacgtctcgccggagaaggtatgatttcattgtgacagatggtgcatctttgtgctgtactatggatgattattaccaattgacatgttttaatagctgtttctcattgttgcaggctcaggaactcatgttcttagctagcagaggatctcttccaagtgcgccgactaccgttgctcgtatgccagaggcacatgtctttcccccagcaaaagtcactgtacctgaggtttcgcctacaaaaccgatgatgcttcagaaaccgcagcttgtttcgtctcccgtgccagccatttccaaacctatctccgttgtgtcacaagctacaagtcttccacggagtgcctcaagctctaatgtcgactccaacgtgacaaaatcttctggtccattggttgttcctcccacaagtttgcctcctccggcccagcctgagacactagccactaccactgctgcagctattatgccgagaggtatgcctattaattgcttgcatgaattgtattgtgatgttatgatagtagttagaacttcagatgaattgttacagtgtatgatttatttctctttttttcattgcagctgtccctcaagcgcggaaggcatcccttgcccgattcttggagaagcgaaaggaaaggtagagatcatatatttaagggacaattgctcatttgaccctgtttcgaagcctaactaccaatctgaccttacattttttagtttgctaatttgaccccgcttttcaaaattgagcatgccgtttgaccctatttacactacgccgttagggtttcacaaaaagaaaagaaaaaaaagcattttactattcaaagtgaccaaattgccctccatacatttcactttcaactcaatctcacgagtcatgacctgcccgaccctctctcgttcacatcttggcggcggcaccggcgccaatgcggtgagcgagcaggaggcaatggcggtgcggggaggaggtgcggcaacggtgccggtgcatggagggaggcggcggcgggggcgccggagcgcggagaggggagtggcgcgaggaggcagctggggtggccgacgcgtggagggaggagggggcggcggtgcgccggtgtgcggagggaggcggcggcggcggcggtggcggtcggcgcatggagggaggcggcggtgggggtgtcggtacgcggagagaggagcggcggcggcggagagaggagcggtgggcgagtggcgcgaggaggcagccagggcggccggcacgtggagggaggagtgggcagcagtgcgccggcatgcggagggaggcggggccggtggcggccggcacgcggagggaggagcggcggcgggggcggcgcgaggagggatgccgtggcagccggcgcggtggtgggagggggggtggcgttgcgccggtgtgcggagggaggcgggggcggcgccggcacgcgaaggagtggtgacgaaacctgcgcgcggagggaggcgcgggtggcaccggtgctggtgctcgggggagcggcgaatgttgcctgtggcgtcggtggcggttgctatttgatattttctctgttggatttgatcataatctgtgtttttacttcattgtatgtaatttgggattcacaaaataagacaatattctgtcaattttttaaaaaaaattatgccaaattttatttgccttattttgtcaaaaaccgtcaaatgaaagacaaattagttaaactgatccaaaattttcaaattaaaaaattgaagctaaatttgttaaacttgtctcaaatgtaaaagatacatcaaattcgttataaatatgtcaaaacgtccaaatatatcgttttgatataacagggtcaaataaacaaggccaaaaggggctatttaccccttagttaacaccgttaactcgatttgacggagtagggtcagcctttatctttgattttgaaaaacagggtcaaataagtaaactgaaaaaaataacgtcaaattggtttctcctaacatttaattgtgattttatcgtatttgagtacagcaactcaattaatttatgctcagaaactgatcttcatccccatgctctgtttcagagtgacgaccgtggcgccatacccattggccaagagcccgctagagagcagcgacacaatggggagtgccaatgacaacaagtcatcttgcacggacattgccctctcaagcaaccgcgacgaatcattgtcattaggccagccaaggaccatcagcttctgcgaggagtcccccagtacaaagctacaaatctgatctgggtgattgcccagtgtccatagattcggccattctgattgatgcaaaagacataaagaatcttgtgcattcaagcggggaggagggcttgggaagaggcataatatatagtatgttattgatggtgttcttgttcttgtttatgatgtgttttcacatggttaattcgcttaatgctggtctagctggtgcaaaccccccaactaacaagagagctgccacttgcagactcttgagtattttttgttggccttgcgccattgtattgcagaaagaaatatgccaaaatttagcagtaccaaaattataggcttacaaaaactgtactattcttgtttcttgtatgaacttacaagctgcagaatgcaag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0401300, RefSeq:Os09g0401300