Os09g0416900

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Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0416900| Description = Armadillo-like helical domain containing protein| Version = NM_001069717.1 GI:115479176 GeneID:4347067| Length = 157...")
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Gene Name

Os09g0416900

Description

Armadillo-like helical domain containing protein

Version

NM_001069717.1 GI:115479176 GeneID:4347067

Length

1575 bp

Definition

Oryza sativa Japonica Group Os09g0416900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15592023..15593597

Sequence Coding Region

15592023..15592588,15592697..15593597

Expression

GEO Profiles:Os09g0416900

Genome Context

<gbrowseImage1> name=NC_008402:15592023..15593597 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15592023..15593597 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggcgaggtgcgcgcacgccgacgtcggcggcgggttccggctgtggccgatcttctcggccgccgcgctgcggaggaagcttcttgaggtcctgacgtgcggcggcggcggcggcggcggcggcggcgctggagggggttcttgccggagcaagaacgggtaccggtcgccgcagccgaggccgaggccgaggtccgaccggctggcggagctgctccgggcggagccgtcggagtgcggcgacgaggcggatgatgccgacgcggccgtcaagaaggtggaggcgctggagaagctgaaggttgtggtcggagcgcttcaggcctgcgacggggacaatgccggcatcggcggcggcggcgacatgtgccgcgtcgaggccgccacggttgtgcggaggaaggcgaaggacgacgccggcgcgagggagatgctcgcgatgctcggcgccatcccgccgctcgtcgcgatgctcgacgagagcgacggcggcggcggcggcgaggagatggtcgccgccgcgctgtacgcgttgctcaatttggggatcggcaacgacacgaacaaggcggcgatcgtgcaggccggcgccgtgcacaagatgctccgcatcgcggagggcgcgtccggcgtcttgacggaggcgctcgtcgccaacttcctctgcctcagcgcgctcgacgcgaacaagcccatcatcggcgcgtcgggcgccgcccccttcctcgtccgcgcgttcgaggcggcgccgacgacggagcaggcgcgacacgacgccctgcgcgcgctcctgaacctctccatcgcgccggcgaacgcgccgcacctgctgtccgcggggctggcgccgtcgctcgtcgccgccgtgggcgacgcgcccgcggcggcggaccgcgcgctcgccgcgctctgcaacctcgtggccgcctgccccgagggccgccgcgcggtgagccgcgcccccgacgcggtcccggccttcgtcgacgtgctcaactggtccgacgagcccgggtgccaggagaaggcggcgtacatcctcatggtcctcgcccaccggagctacgccgaccgcgccgccatggcggaggccggcgccacctcggcgctcctcgagctcaccctcgtcggcaccgcgctggcgcagaagcgcgcgtcgaggatcctcgagatcctccgggccgacaagggcaagcaggttgccgacgccgccggcatcgtcgcgacaatgtcggccccgcaggagcgcggcggcggcggcggcgcgcgccaagaagaggccgacgaggccggcatgagcaacgagaagcgcgccgtgcggcagctggtgcagcagagcctccagagcaacatgcgccgcatcgtgcgccgcgcccgcctcccgcaggacctcgcgccgccgtcgtcggagaacctcaaggccctcaccgcctcctccacctccaagagcctacccttctga</cdnaseq>

Protein Sequence

<aaseq>MVARCAHADVGGGFRLWPIFSAAALRRKLLEVLTCGGGGGGGGG AGGGSCRSKNGYRSPQPRPRPRSDRLAELLRAEPSECGDEADDADAAVKKVEALEKLK VVVGALQACDGDNAGIGGGGDMCRVEAATVVRRKAKDDAGAREMLAMLGAIPPLVAML DESDGGGGGEEMVAAALYALLNLGIGNDTNKAAIVQAGAVHKMLRIAEGASGVLTEAL VANFLCLSALDANKPIIGASGAAPFLVRAFEAAPTTEQARHDALRALLNLSIAPANAP HLLSAGLAPSLVAAVGDAPAAADRALAALCNLVAACPEGRRAVSRAPDAVPAFVDVLN WSDEPGCQEKAAYILMVLAHRSYADRAAMAEAGATSALLELTLVGTALAQKRASRILE ILRADKGKQVADAAGIVATMSAPQERGGGGGARQEEADEAGMSNEKRAVRQLVQQSLQ SNMRRIVRRARLPQDLAPPSSENLKALTASSTSKSLPF</aaseq>

Gene Sequence

<dnaseqindica>1..566#675..1575#atggtggcgaggtgcgcgcacgccgacgtcggcggcgggttccggctgtggccgatcttctcggccgccgcgctgcggaggaagcttcttgaggtcctgacgtgcggcggcggcggcggcggcggcggcggcgctggagggggttcttgccggagcaagaacgggtaccggtcgccgcagccgaggccgaggccgaggtccgaccggctggcggagctgctccgggcggagccgtcggagtgcggcgacgaggcggatgatgccgacgcggccgtcaagaaggtggaggcgctggagaagctgaaggttgtggtcggagcgcttcaggcctgcgacggggacaatgccggcatcggcggcggcggcgacatgtgccgcgtcgaggccgccacggttgtgcggaggaaggcgaaggacgacgccggcgcgagggagatgctcgcgatgctcggcgccatcccgccgctcgtcgcgatgctcgacgagagcgacggcggcggcggcggcgaggagatggtcgccgccgcgctgtacgcgttgctcaatttggggatcggcaacgacacgtgagtcgtcttctcttgccgagtttgatgaactcctctgcttcttgatcagatctggtggtttactggtttcggttcctgatttctgggagttgcttcgattcgtaggaacaaggcggcgatcgtgcaggccggcgccgtgcacaagatgctccgcatcgcggagggcgcgtccggcgtcttgacggaggcgctcgtcgccaacttcctctgcctcagcgcgctcgacgcgaacaagcccatcatcggcgcgtcgggcgccgcccccttcctcgtccgcgcgttcgaggcggcgccgacgacggagcaggcgcgacacgacgccctgcgcgcgctcctgaacctctccatcgcgccggcgaacgcgccgcacctgctgtccgcggggctggcgccgtcgctcgtcgccgccgtgggcgacgcgcccgcggcggcggaccgcgcgctcgccgcgctctgcaacctcgtggccgcctgccccgagggccgccgcgcggtgagccgcgcccccgacgcggtcccggccttcgtcgacgtgctcaactggtccgacgagcccgggtgccaggagaaggcggcgtacatcctcatggtcctcgcccaccggagctacgccgaccgcgccgccatggcggaggccggcgccacctcggcgctcctcgagctcaccctcgtcggcaccgcgctggcgcagaagcgcgcgtcgaggatcctcgagatcctccgggccgacaagggcaagcaggttgccgacgccgccggcatcgtcgcgacaatgtcggccccgcaggagcgcggcggcggcggcggcgcgcgccaagaagaggccgacgaggccggcatgagcaacgagaagcgcgccgtgcggcagctggtgcagcagagcctccagagcaacatgcgccgcatcgtgcgccgcgcccgcctcccgcaggacctcgcgccgccgtcgtcggagaacctcaaggccctcaccgcctcctccacctccaagagcctacccttctga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0416900, RefSeq:Os09g0416900