Os09g0418500

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Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0418500| Description = Similar to PnC401 homologue| Version = NM_001069722.1 GI:115479186 GeneID:4347072| Length = 1215 bp| Definition = O...")
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Gene Name

Os09g0418500

Description

Similar to PnC401 homologue

Version

NM_001069722.1 GI:115479186 GeneID:4347072

Length

1215 bp

Definition

Oryza sativa Japonica Group Os09g0418500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15681049..15682263

Sequence Coding Region

15681049..15682263

Expression

GEO Profiles:Os09g0418500

Genome Context

<gbrowseImage1> name=NC_008402:15681049..15682263 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15681049..15682263 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggggaagggggtgctggaggggaggtacgagatggggcgggtgctgggccacggcaacttcggtcgtgtgcacgcggcgcgggacgtgcgcacggggcgcgccgtggcgatgaaggtggtgtccaaggacaaggtggagcgcgccgggatggcggagcagatcaagcgggagatcgccgtgatgaagatggtgtcccacccgagcgtcgtggagctccacgaggtgatggccacgcgcaccaaggtgtacctggcgctcgagctcgtccggggcggcgagctgttcgaccggatcgcccgccacggccgcgtcggggagggcgtcgcgcggaggtacttccgccagctcgtctccgccgtcgacttctgccacggccgcggggtgtaccaccgcgacctgaagcccgagaacctgctgctcgacgaggccgggaacctcaaggtcgccgacttcgggctcagcgcgctcgcctgccacgcgcgccccgacggcctcctccacaccgcctgcggcacgccggcgtacgtcgcccccgaggtgctcgccggcaacggctacgacggcgccaaggccgacctctggtcctgcggcgtcatcctctacgtgctgctcgccggcgcgctgccgttccaggacgacaacctcgtgtgcatgtaccgcaagatgcggcggggtgacttctgctgcccgccgtgggtgacgacggacgcccggaagctcatcaagtcgctgctcgaccccaacccgggcacccgcatcaccgtcgccggcctcctcgagacgccgtggttccggaagacggcgcccgtcccgcgccccatcatcgccgaccccgcggcggcgccggtggacacgcgtggcaatgccggcgacgacaaggacgagccgcccgaggtgctgaacgccttccacctgatctccctgtccgagggcttcgacctgtcgccgctgttcgagcacgaccccgccgcgtcgccggggcgggccacggcgcgcgcgggcggcacgcggttcgcgacgcgggaggcggcgagcggcgtggtcgcgcggctggaggcgctcgcgatgggcggcgcacgcgtggcgccgtcgttgctcatggtggacgtcaagaaggatggcggcgacgccatggagtaccggccgttcttcagcgaggagctccggccggcgctcaaggacatcgtctggtcgccggcggcgacctga</cdnaseq>

Protein Sequence

<aaseq>MEGKGVLEGRYEMGRVLGHGNFGRVHAARDVRTGRAVAMKVVSK DKVERAGMAEQIKREIAVMKMVSHPSVVELHEVMATRTKVYLALELVRGGELFDRIAR HGRVGEGVARRYFRQLVSAVDFCHGRGVYHRDLKPENLLLDEAGNLKVADFGLSALAC HARPDGLLHTACGTPAYVAPEVLAGNGYDGAKADLWSCGVILYVLLAGALPFQDDNLV CMYRKMRRGDFCCPPWVTTDARKLIKSLLDPNPGTRITVAGLLETPWFRKTAPVPRPI IADPAAAPVDTRGNAGDDKDEPPEVLNAFHLISLSEGFDLSPLFEHDPAASPGRATAR AGGTRFATREAASGVVARLEALAMGGARVAPSLLMVDVKKDGGDAMEYRPFFSEELRP ALKDIVWSPAAT</aaseq>

Gene Sequence

<dnaseqindica>1..1215#atggaggggaagggggtgctggaggggaggtacgagatggggcgggtgctgggccacggcaacttcggtcgtgtgcacgcggcgcgggacgtgcgcacggggcgcgccgtggcgatgaaggtggtgtccaaggacaaggtggagcgcgccgggatggcggagcagatcaagcgggagatcgccgtgatgaagatggtgtcccacccgagcgtcgtggagctccacgaggtgatggccacgcgcaccaaggtgtacctggcgctcgagctcgtccggggcggcgagctgttcgaccggatcgcccgccacggccgcgtcggggagggcgtcgcgcggaggtacttccgccagctcgtctccgccgtcgacttctgccacggccgcggggtgtaccaccgcgacctgaagcccgagaacctgctgctcgacgaggccgggaacctcaaggtcgccgacttcgggctcagcgcgctcgcctgccacgcgcgccccgacggcctcctccacaccgcctgcggcacgccggcgtacgtcgcccccgaggtgctcgccggcaacggctacgacggcgccaaggccgacctctggtcctgcggcgtcatcctctacgtgctgctcgccggcgcgctgccgttccaggacgacaacctcgtgtgcatgtaccgcaagatgcggcggggtgacttctgctgcccgccgtgggtgacgacggacgcccggaagctcatcaagtcgctgctcgaccccaacccgggcacccgcatcaccgtcgccggcctcctcgagacgccgtggttccggaagacggcgcccgtcccgcgccccatcatcgccgaccccgcggcggcgccggtggacacgcgtggcaatgccggcgacgacaaggacgagccgcccgaggtgctgaacgccttccacctgatctccctgtccgagggcttcgacctgtcgccgctgttcgagcacgaccccgccgcgtcgccggggcgggccacggcgcgcgcgggcggcacgcggttcgcgacgcgggaggcggcgagcggcgtggtcgcgcggctggaggcgctcgcgatgggcggcgcacgcgtggcgccgtcgttgctcatggtggacgtcaagaaggatggcggcgacgccatggagtaccggccgttcttcagcgaggagctccggccggcgctcaaggacatcgtctggtcgccggcggcgacctga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0418500, RefSeq:Os09g0418500