Os09g0421600

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Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0421600| Description = Zinc finger, U1-type domain containing protein| Version = NM_001188912.1 GI:297726954 GeneID:9269623| Length = 1499 ...")
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Gene Name

Os09g0421600

Description

Zinc finger, U1-type domain containing protein

Version

NM_001188912.1 GI:297726954 GeneID:9269623

Length

1499 bp

Definition

Oryza sativa Japonica Group Os09g0421600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15889283..15890781

Sequence Coding Region

15889283..15890173,15890348..15890432,15890567..15890781

Expression

GEO Profiles:Os09g0421600

Genome Context

<gbrowseImage1> name=NC_008402:15889283..15890781 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15889283..15890781 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacaacaacaatggatttgtgcaagcagtagcaggagacccgttggcggtggtgagggacgcgctgctgtcgcagctccagcatgatcgtcttcgtcaggagatcatcgtcgccgagctcgccaagatagagcgcgccatggctctgcgcgatgcctcgccgtcgccgtcaccgagccccggcacgccgctggaaagactgcggcaagtcagcatactgttaagaaagttagctccttgtaaggcagatacttgtttgctcggtcagtactttgctaattttcttttcagttgtaagacatggagctgcgccgtgtgcgaggtgcaaacaagcagcgaacgcaacctacgggatcattatggagggcagaagcaccagtcgaaagtggcaggattggagttgaaggcgaagacggcgacagtgaaaacgacggcgaagccttctcctgttgcagggcagagagcacacgctgccagatggagctgcagcgtttgccaggtacactgcaatggcgaatggcatttcgatacccacctgaagggcaagaggcaccaagcaaatacccaagccctgctggaacaaagcaacaagaattcagggaattcagaatcacacgatggaaccaaggcgcaaccgagcaatgtgagccatcacgccgagaagaagaagaggaagaagaagaaggaggaggaggaggaggcgacatggatctgcagagcttgccaagctgtctgtacctgtgaatcagacttgcagaaccaccttaggggcaggaggcatcagctgaaagttcaggccttgcctgaagctgcgaaacaagagaagaacaatcctcccaagcttgcaaagaaccctaataagcaaccctcggaatgggtttgcagtctctgccaggccaaatgtaacactgaatctcagcttgagcatcaccgcagaagcacgaggcaccagcagaaggtagaatctcttggatggaatgcgaaagagagtgacctggggactctgcaaggaatgtcttcggatggctctagcagcaagagtgtaaaaatctcagcgacgatggataaacagaaggctacgtatttttgcgaggtttgcagtttgaagtgcaccagccagagaatgctggcggatcatcttagtgggaagaaacacattaaacagttggagttgcagctattcagctaa</cdnaseq>

Protein Sequence

<aaseq>MNNNNGFVQAVAGDPLAVVRDALLSQLQHDRLRQEIIVAELAKI ERAMALRDASPSPSPSPGTPLERLRQVSILLRKLAPCKADTCLLGQYFANFLFSCKTW SCAVCEVQTSSERNLRDHYGGQKHQSKVAGLELKAKTATVKTTAKPSPVAGQRAHAAR WSCSVCQVHCNGEWHFDTHLKGKRHQANTQALLEQSNKNSGNSESHDGTKAQPSNVSH HAEKKKRKKKKEEEEEATWICRACQAVCTCESDLQNHLRGRRHQLKVQALPEAAKQEK NNPPKLAKNPNKQPSEWVCSLCQAKCNTESQLEHHRRSTRHQQKVESLGWNAKESDLG TLQGMSSDGSSSKSVKISATMDKQKATYFCEVCSLKCTSQRMLADHLSGKKHIKQLEL QLFS</aaseq>

Gene Sequence

<dnaseqindica>609..1499#350..434#1..215#atgaacaacaacaatggatttgtgcaagcagtagcaggagacccgttggcggtggtgagggacgcgctgctgtcgcagctccagcatgatcgtcttcgtcaggagatcatcgtcgccgagctcgccaagatagagcgcgccatggctctgcgcgatgcctcgccgtcgccgtcaccgagccccggcacgccgctggaaagactgcggcaagtcaggtgagaaacctatgtacctgtatgcttctgactaacctttttttcttcttctcacattatgatattcagatatgatcatatatattccatccattttgcgtctctctgcatttgtaaatttgttcatacttcagcatactgttaagaaagttagctccttgtaaggcagatacttgtttgctcggtcagtactttgctaattttcttttcagttgtaaggtaaagaattaaaccatatgtaaggttgatgtaaggttgatgtagttctcccaaactcaaccatatgtatgtggcattagtacggtttgatctattggactaagtaatactccaatttacttcaatttcgcagtttcctttcgtaattgtttactcaaactgcttattaaacagacatggagctgcgccgtgtgcgaggtgcaaacaagcagcgaacgcaacctacgggatcattatggagggcagaagcaccagtcgaaagtggcaggattggagttgaaggcgaagacggcgacagtgaaaacgacggcgaagccttctcctgttgcagggcagagagcacacgctgccagatggagctgcagcgtttgccaggtacactgcaatggcgaatggcatttcgatacccacctgaagggcaagaggcaccaagcaaatacccaagccctgctggaacaaagcaacaagaattcagggaattcagaatcacacgatggaaccaaggcgcaaccgagcaatgtgagccatcacgccgagaagaagaagaggaagaagaagaaggaggaggaggaggaggcgacatggatctgcagagcttgccaagctgtctgtacctgtgaatcagacttgcagaaccaccttaggggcaggaggcatcagctgaaagttcaggccttgcctgaagctgcgaaacaagagaagaacaatcctcccaagcttgcaaagaaccctaataagcaaccctcggaatgggtttgcagtctctgccaggccaaatgtaacactgaatctcagcttgagcatcaccgcagaagcacgaggcaccagcagaaggtagaatctcttggatggaatgcgaaagagagtgacctggggactctgcaaggaatgtcttcggatggctctagcagcaagagtgtaaaaatctcagcgacgatggataaacagaaggctacgtatttttgcgaggtttgcagtttgaagtgcaccagccagagaatgctggcggatcatcttagtgggaagaaacacattaaacagttggagttgcagctattcagctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0421600, RefSeq:Os09g0421600