Os09g0421700

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Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0421700| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001069740.1 GI:115479222 GeneID:4347091| Length = 203...")
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Gene Name

Os09g0421700

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001069740.1 GI:115479222 GeneID:4347091

Length

2035 bp

Definition

Oryza sativa Japonica Group Os09g0421700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15894159..15896193

Sequence Coding Region

15894347..15895117,15895411..15895598,15896103..15896130

Expression

GEO Profiles:Os09g0421700

Genome Context

<gbrowseImage1> name=NC_008402:15894159..15896193 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15894159..15896193 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacttcgccgacgctccgtcgcacggagactcgctggtggtggtgagggacgcgctgctgtcgcagctccagcaggatcgcctccggaaggacatcatcgtcgccgagctcgccaagatagagcgcgccatggctctgcgcgatgtctcgcagtcgccgacgccccggcacgccgccgccgccgccgccgccggaaagactattacaactgtggctacaccggccaagaaaccatcgccttcagagaaatctgaaccggcagttcagaagtcgatgccaccctcggcatggagctgcgccgtgtgccaggttcgaacaaccagcgagcgcaacctacgtgatcactgcggaggtcagaagcaccagtccaaagtcgcagcactggagaagacaaccaaggccatggcgagaacgacggcgaaaccttctcccggtgcagcagcaagatggggctgcagcatctgcaacatcagctgcaacggcgagtgcgatttcgatacccacctgaaggggaagaagcatcaagcgaacacccaggccttactggaacaaaacaagaagagctcagtgaatccagagtcacagggaaccaaggcggcggcagcaacactgatctgcagagtttgccaagctaagttcacctgtcagtcagacttgcagagccatctcaaggtcatgaagcaccagctgaatctccgggcaccatcttcagatggctctagcttcaccagtgcaacctcggagagtttgagtttggaattgtattcttgcaaggtttgcagcgtgaagtgcaccttcgagaggatgctcgcgtaccatctcactgggaagaagcacctgaaacaggagaatttgcagttgtcctgcgagatctgcaaactgcagtgcaacagcgagaaagtgctctctgaccatcgttatgggaagaagcaccaggcgaagctcgagaaagtgcttcaggcaaagctcaatgcgacggaatga</cdnaseq>

Protein Sequence

<aaseq>MDFADAPSHGDSLVVVRDALLSQLQQDRLRKDIIVAELAKIERA MALRDVSQSPTPRHAAAAAAAGKTITTVATPAKKPSPSEKSEPAVQKSMPPSAWSCAV CQVRTTSERNLRDHCGGQKHQSKVAALEKTTKAMARTTAKPSPGAAARWGCSICNISC NGECDFDTHLKGKKHQANTQALLEQNKKSSVNPESQGTKAAAATLICRVCQAKFTCQS DLQSHLKVMKHQLNLRAPSSDGSSFTSATSESLSLELYSCKVCSVKCTFERMLAYHLT GKKHLKQENLQLSCEICKLQCNSEKVLSDHRYGKKHQAKLEKVLQAKLNATE</aaseq>

Gene Sequence

<dnaseqindica>1077..1847#596..783#64..91#ctgcgctctgctttttctctgctcttctcgatttctccggtgcaccgctcctctgatcggccgatggacttcgccgacgctccgtcgcacggtatgcatcgacgaagctctctagtctatcaacatcttctactgtcgtctccatggccgtttctttgctggaaaattggagcttagaaccgaacgatgtatagtaaaacgctagtaaaaacagatgaccctttccgtgtcccttggttgtttagattatcagatgcgatgcgatttgatcttacgttttttcatgccatgaatccactttgcatgcatggcagataaaaatgtcgatttcaaaacggatataccctatacaggtaattagcacagatctgcttgtgtgacagatagattctgatgcagaaaagtttcatcaaaactgtttgtttcttatttcgttacaaaaacagagaagaaacatgtccatcttggatcggcactcgatagacttctgcgtttaagccttgttagttgtagtttaggcactagacatgttgctcgtgcttaatcaatcacgaagaacatcatcatcaacaatggctggtgcatatacttgcaggagactcgctggtggtggtgagggacgcgctgctgtcgcagctccagcaggatcgcctccggaaggacatcatcgtcgccgagctcgccaagatagagcgcgccatggctctgcgcgatgtctcgcagtcgccgacgccccggcacgccgccgccgccgccgccgccggaaagactattacaactgtggtgagaaacttgtatatgccatcatgtttttgagtcatatccatgacccatcaattttgtgtctctacatgtatcagagtattgttaagaaaacaaacctgttcgatcagtctatacttcgtctttgttcttttcaatttcaaggtagtcaacacattaatgtagttctttcagactcagtaatactggggttaattagtgtgcacttgcactagctagctaatttacttgtattttcgtaattggtctcaacttcattttctaatggtttactgaaactgcatatcaagcaggctacaccggccaagaaaccatcgccttcagagaaatctgaaccggcagttcagaagtcgatgccaccctcggcatggagctgcgccgtgtgccaggttcgaacaaccagcgagcgcaacctacgtgatcactgcggaggtcagaagcaccagtccaaagtcgcagcactggagaagacaaccaaggccatggcgagaacgacggcgaaaccttctcccggtgcagcagcaagatggggctgcagcatctgcaacatcagctgcaacggcgagtgcgatttcgatacccacctgaaggggaagaagcatcaagcgaacacccaggccttactggaacaaaacaagaagagctcagtgaatccagagtcacagggaaccaaggcggcggcagcaacactgatctgcagagtttgccaagctaagttcacctgtcagtcagacttgcagagccatctcaaggtcatgaagcaccagctgaatctccgggcaccatcttcagatggctctagcttcaccagtgcaacctcggagagtttgagtttggaattgtattcttgcaaggtttgcagcgtgaagtgcaccttcgagaggatgctcgcgtaccatctcactgggaagaagcacctgaaacaggagaatttgcagttgtcctgcgagatctgcaaactgcagtgcaacagcgagaaagtgctctctgaccatcgttatgggaagaagcaccaggcgaagctcgagaaagtgcttcaggcaaagctcaatgcgacggaatgagatgcgtctgattctgattaaagatgctggcgttttgacttttgagcaacgaacatttaaattatcgacggcactgtatgattatttcagattattaatccttgattttgggacttactgctgctgcttcttttcaattgcttctatatactagtacaaaaataatctatacggtttaaaatgccact</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0421700, RefSeq:Os09g0421700