Os09g0422600

From RiceWiki
Revision as of 07:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0422600| Description = Protein of unknown function DUF566 family protein| Version = NM_001069743.1 GI:115479228 GeneID:4347094| Length = 62...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0422600

Description

Protein of unknown function DUF566 family protein

Version

NM_001069743.1 GI:115479228 GeneID:4347094

Length

6251 bp

Definition

Oryza sativa Japonica Group Os09g0422600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15940039..15946289

Sequence Coding Region

15940436..15940501,15940661..15940768,15941779..15941868,15941979..15942095,15942770..15942889
,15943292..15944530

Expression

GEO Profiles:Os09g0422600

Genome Context

<gbrowseImage1> name=NC_008402:15940039..15946289 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15940039..15946289 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgtcctcaagagtgatgtgaagaagactggtattctcaatgagactctaagaccaccgctagttccatccgagaagcataatgcttctccagtaaaccgtgggagagatgttgcttccaggtacaagaatggtctgtctgctcattctgctgccaccacagcaaggagatgcacatcaccaagtcctgggcggacctccgcaaatgaatgcacaccagaaccaaaaagagctcaatcagcagacagaagaaggccctcaactccttcttctagagtgtcaacaccctccacccctgcatcaaggtctgtcacaccagttcgtaatactgttacagagggacataagagttctaggcgaataacaagcacaaggaatactgatggcttgtggccagcaatgcgaaacctatcttcctctttccagtcagaatctgtggttacccccggtaataaaaaggataaggtagtccccagtggatctttggatcaaacgaaggggcaagctagtgttatagccgagaggaagaggagtcctctgagaaggaagaacattggtgaacaatgtgagaatgctcaaccctcagaggaccaacctaggagggtaatcgaacaacaccgctggccagcaatgcagagtggccgtgtggccagcaatattttgtcaaggagtattgacatgtctgacaaagctggcagatcagtcccttcaacaaatatttctagaggtgtttcaccaaggaagacgcttgcttctgaaggcacaggcaaagggtttaataaatcattggatgaggtagcaaggagattggctattcatgcaggtggaagagatgacaaagtagactctcgctgtcatgcttattcacagtcaacagagagatgtaaatccgttagccgtccaagtagggcagttactttacctgttcctgttcttcatcgctcatcttcgccaagcaaggcctcttcagttacatcctctatttctaggtcctttcagagcccatctcggacaaggccttcaacacctagccggtcacaaagtgctggaagtattcaatcaggtgttgcgtcacctattattagctacatggttgatgcaaaaaaaggaaagaagaactccagccaaattgaaaatatccaccaattgcacctgtcttataatagatacttgcaatggatctttgtaaatgcttatgcagaagatactatgtctttccaaaaagtgacagctgagagtattatatataatgttttgaggaatacctcgaacttgcgggatgttgttaatatgagaagaatcatggttcaatgcatacaacaagagttgaagctacatggcattcttaaagagcagattgattaccttgaacaatggccagcacttgaaaaggagaacagtatttcattattccacgcaactgaagctctaaaagcaagcacattgcgtcttccagttacatcaggagcaaaggctgatgtagttgctcttaagaatgccgtaagctctgctgttgatatcatgcaaggtttgggatcagcggttcgctgtatgcttccaaaggttgaggacaggacatatttggtatcagaactttcagttatagcaagacaagaaaaggccatgcttgatgaatgcagagaattattagctatggcagcaaaactacaggtacaggagtccagcctgcggacgcatctcacacaactgaggcctggaattgctcatatgatttga</cdnaseq>

Protein Sequence

<aaseq>MDVLKSDVKKTGILNETLRPPLVPSEKHNASPVNRGRDVASRYK NGLSAHSAATTARRCTSPSPGRTSANECTPEPKRAQSADRRRPSTPSSRVSTPSTPAS RSVTPVRNTVTEGHKSSRRITSTRNTDGLWPAMRNLSSSFQSESVVTPGNKKDKVVPS GSLDQTKGQASVIAERKRSPLRRKNIGEQCENAQPSEDQPRRVIEQHRWPAMQSGRVA SNILSRSIDMSDKAGRSVPSTNISRGVSPRKTLASEGTGKGFNKSLDEVARRLAIHAG GRDDKVDSRCHAYSQSTERCKSVSRPSRAVTLPVPVLHRSSSPSKASSVTSSISRSFQ SPSRTRPSTPSRSQSAGSIQSGVASPIISYMVDAKKGKKNSSQIENIHQLHLSYNRYL QWIFVNAYAEDTMSFQKVTAESIIYNVLRNTSNLRDVVNMRRIMVQCIQQELKLHGIL KEQIDYLEQWPALEKENSISLFHATEALKASTLRLPVTSGAKADVVALKNAVSSAVDI MQGLGSAVRCMLPKVEDRTYLVSELSVIARQEKAMLDECRELLAMAAKLQVQESSLRT HLTQLRPGIAHMI</aaseq>

Gene Sequence

<dnaseqindica>5789..5854#5522..5629#4422..4511#4195..4311#3401..3520#1760..2998#ggggtttagtagtagtcctccatggcttaacaacaagagaagcgcgcaattagggaaaccgtttggtcttccttaattgcgccctcgcccccgcggcaaccgtccttctcctccatctccccttccacgccgctgccctcccctctcctctcccctcccgccgagaaatcggtaagtagtggactagtcgctgcgactccgcgagggttccccggctgcttgtccacgggatcccacgacccggcggcgttgcggcgaggaggaggagagcagtttgggggtctcgccgcgatcgctgaggtgaggttccacgtttacttggtgcagtagttacggtttggttggcgtggagagaagctgcggtgtgtttttgattgaatccgattgagctagggggggaaggaagagggggtttggagctcgtaggctaggacgatgtttggatggtgctccgcgcctccgccgcgtgggttttgacggggatggagcatcggcgagtccggattggcttcgtcgctgttctcggatgatcctggtgcgtggtttgggtttctcgcggcggattccgtggggaactagggtgttgcggcgtgagttctgaggaatctggcttggcatggtttctattggcttgttgccttgttcgttgtctgtatctagggagagttaattttatttaactgcgaaattactttttctccgtactttgagctgttattataggtgatttcggtgcttggggtagtaaacagtgcatttttaaattatgtgctagttaaaccaatttatggcgatcgagccgtacaaatcccctgttgtgaatcctaagagccagggaatatgcctccatctatgctatatgtggttgatttgctcttgctgggtgaattcttctagctaggattatctaatttagagcccaacaatgtaagcatcatgctgttgcctttgagtgtgatattgtttttgcgtttggttagtcgatttgatcgaagaaaattcccggcaacttcaagtgaactctgccaattttatttggcactatgtccactgttatattttttctctttgtctgtattggagcatacaaaatctcaatgcatgtgcatggttcataagtggtaatcattaaaaaaggtccctgtttcccatgctgcttctgatgagaaattattaaacttttttctagcaaagagattcgtctcatctcatgcatgtggattgtcctgtctgttccaaaaccatcagaatctccgcaaacagtttgtttatttgcttcgtcctttctcgaatgctgcatgatcccatgtagcagctgtgattttacccaaaatatctttttttttatgttctgtaatggatgtgcaatgtattcataaatgccaccctcctcccttgcttccaagccactattagatcacttcccatcaccaatctgccttcgatatccctgtgagaggaattgcagcaacaatcatagctgtaaatatttttggtccttgaactggtatagcagcatctcatttctgaattcagccatctgcgatatctgcattacctttttattgcttatttatttgtatatgtgagaagtttctcttgcttacttcaagttaaatagatgattgctttttgtattcgaaaccttctgattgtttggtgttcttctttggatgtttggtagatctcagtttgccaaggggttcaagtttcatgagtcatcttgacgttgttactactgtggaagttgcaattcttcatggatgtcctcaagagtgatgtgaagaagactggtattctcaatgagactctaagaccaccgctagttccatccgagaagcataatgcttctccagtaaaccgtgggagagatgttgcttccaggtacaagaatggtctgtctgctcattctgctgccaccacagcaaggagatgcacatcaccaagtcctgggcggacctccgcaaatgaatgcacaccagaaccaaaaagagctcaatcagcagacagaagaaggccctcaactccttcttctagagtgtcaacaccctccacccctgcatcaaggtctgtcacaccagttcgtaatactgttacagagggacataagagttctaggcgaataacaagcacaaggaatactgatggcttgtggccagcaatgcgaaacctatcttcctctttccagtcagaatctgtggttacccccggtaataaaaaggataaggtagtccccagtggatctttggatcaaacgaaggggcaagctagtgttatagccgagaggaagaggagtcctctgagaaggaagaacattggtgaacaatgtgagaatgctcaaccctcagaggaccaacctaggagggtaatcgaacaacaccgctggccagcaatgcagagtggccgtgtggccagcaatattttgtcaaggagtattgacatgtctgacaaagctggcagatcagtcccttcaacaaatatttctagaggtgtttcaccaaggaagacgcttgcttctgaaggcacaggcaaagggtttaataaatcattggatgaggtagcaaggagattggctattcatgcaggtggaagagatgacaaagtagactctcgctgtcatgcttattcacagtcaacagagagatgtaaatccgttagccgtccaagtagggcagttactttacctgttcctgttcttcatcgctcatcttcgccaagcaaggcctcttcagttacatcctctatttctaggtcctttcagagcccatctcggacaaggccttcaacacctagccggtcacaaagtgctggaagtattcaatcaggtgttgcgtcacctattattagctacatggttgatgcaaaaaaaggaaagaagaactccagccaaattgaaaatatccaccaattgcacctgtcttataatagatacttgcaatggatctttgtaaatgcttatgcagaagatactatgtctttccaaaaagtgacagctgaggtaaagttagcatttggtttgcatcacattgcacagtcttccttgttccctttgcagtgtcctcctttgatggataccaacataaccataggtccataagtgtgtttatgcaatgatttgcttcctgatctgataagcttttgagattacttttctttatgatcaattaaaacaagcttccagactatgaaatgtgattaagtaaaatatcagctagatctactggtggttatttgtttgacttaaaaactgacaattgattttgcactgtaaatttgaggtctgctatttcttagcattagtctcttgggtgtgtagatgtactctcctttaatatttgccattatttttttagtgatctttaattgttgaaagttctttctatgttgtcatgtaaaacagagtattatatataatgttttgaggaatacctcgaacttgcgggatgttgttaatatgagaagaatcatggttcaatgcatacaacaagagttgaagctacatggcattcttaaagagcaggtaagctcttcccactcattaatgatttttataattgtataatctaccaaggttgttctaaaatgcaagttatcacgcgttcagatataatcccaacttgtgtcaggttggcacagacttgctataatgctcataatcgaagcacggctggtgaaagtaaatataaacaatttgctatgtagtctcttctgtgaaagataaaggctggttacagagtaaaaagagtcttctgatgcaaataggataaacttaggataacttagcaatgttgaagtaaatacattgaactgcacaataaggacatagttgtgagcttgttatgtcacactttggttttctaaagatggtgagacgtgagatttgaaaagtaggggtttgcaagagatcatttatcctctattggacagcagagagaacatttaatctactccagcagatcacatgacaacactaacatcttcttctttgcaatcaaagcagtgtcaggaaaattcaaaataatgtgcttagaaagcacaaagtctaaatattgtgttgtatcagggaggcatcgctattatatatgcaaaaattaagtatgcaacacagagtaatcggtatctacaatgataagagaaaatataaattgtcaaatgcatacaacaaatttttaatctgctgttattttgattcagattgattaccttgaacaatggccagcacttgaaaaggagaacagtatttcattattccacgcaactgaagctctaaaagcaagcacattgcgtcttccagttacatcaggagcaaaggtatgctgtaaaatgttgcattactgaaatcgcaaacaatttcgtaatttcttcattattaactgctactttgtgattatggctaatggttttaattattgtgttaacaggctgatgtagttgctcttaagaatgccgtaagctctgctgttgatatcatgcaaggtttgggatcagcggttcgctgtatgcttccaaaggtcagctaacagtgcgcatacaactgaaaattttactgtccacttttatctgtctttggaaatcatttttttaaccatatgaagctgattttgttagctcattgtttagtacacatttagcacaagaattaccttttataaggaaaatattatctctggttgtgatcttccatgcccgcctgtagtcatctactcatctttgtgacagttagagatctctaattccctgaaaaaaaaagagtaaagtgtaggggcggtccttaaacttgtaggggtgtgtcatctaggtccctaaactctcaaaatgcatatccaagtcccaaaacttgtcatagtgtgtcatctaggtcccaaatcgccacaacccctttatgattttacgtggcgttaatgtggcatgccacacggacatgacgtggcattattttgactgacaaataggacccatttattttttttcttttttttcttctcgtttttcccctttcttctcctttctatgtgatccgtgcagaagaaaggaaaaaaaaagaagaatgagaagaaaacgaaaaagaaaaagaaaagaagaaaaaaaagaaaaaggcacgtcacgtccatgtggcattgccacatcagcgacacgtaggatcctataggggatgtgtcaatttgggacctaggtgatacactttgataagttctgtgacctggatatgcattttgagagtttagggacctatatgacataaccctacaagtttaaggaccgctaatgcactttactcaaaaaaaaaaaaaagaaggaaccctgcactggtttctgaggatgaatatacaatagattttaatttttaagtatctaataaagaacaccctccatcttctatcaagttcttttcattggttgcttagttttttttttccgctgggccagccaaaatttattaagaaggggagggttttaaaattacaaatttacagcaaactgcccaaacctggcttagtttcatactgtattatcttaccaggttgaggacaggacatatttggtatcagaactttcagttatagcaagacaagaaaaggccatgcttgatgaatgcagagaattattagctatggcagcaaaactacaggtacttccaatgtaatcccatgtaatctttcctaaatctgagcacagagcccccttgaatatcaaataatgtaatttctctgtaattgatggcaaactgcccatgatggcaacagttcatacacaaagccttacctagagctgttgtatttttaatcaggtacaggagtccagcctgcggacgcatctcacacaactgaggcctggaattgctcatatgatttgacaatctaagggaagatctgcaagtcccagaccagccttctgaacaggtacaccagtgcaagttgagcctctggcgatatgaacatattgtgcaaacatacaaggagtttgtagagatgaaataatagaccaaaagaacgttgaacatcccctggtgatcatggagtgatgctgtgcagctaacaactcatggtgcggtacagatgatagatttacttaaaaggtctcctcatgtgtaaataaattcattcaggttccccacacccacctacctctctttagtttctctaaaattatttgttagtatttctacaatgatagagctatgttctttccgattgtattttttggcatctggaaagaaaatacacagatgaaatggaagggcaaaagtaatg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0422600, RefSeq:Os09g0422600