Os09g0426800

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Revision as of 07:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0426800| Description = Similar to Glossy1 protein| Version = NM_001069762.1 GI:115479266 GeneID:4347115| Length = 4485 bp| Definition = Or...")
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Gene Name

Os09g0426800

Description

Similar to Glossy1 protein

Version

NM_001069762.1 GI:115479266 GeneID:4347115

Length

4485 bp

Definition

Oryza sativa Japonica Group Os09g0426800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16146745..16151229

Sequence Coding Region

16146900..16146953,16147033..16147253,16147344..16147576,16147684..16147903,16148453..16148574
,16149448..16149701,16149787..16149894,16149984..16150190,16150291..16150575
,16150674..16150829

Expression

GEO Profiles:Os09g0426800

Genome Context

<gbrowseImage1> name=NC_008402:16146745..16151229 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:16146745..16151229 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtgccgcattcttgtcgtcgtggccatgggataacctcggcgcgtacaagtatgtgttgtacgcgccgctggtggggaaggcggtggcggggcgggcgtgggagcgggcgagccccgaccactggctgctgctgctgctcgtcctcttcggcgtcagggccttgacctaccagctctggagctcgttcagcaacatgctcttcgccacccgccgccgccgcatcgtccgcgacggcgtcgacttcggccagatcgacagggagtgggactgggacaacttcttgatactgcaggtgcacatggcggcggcggcgttctacgcgttcccgtcgctgcggcacctcccgctgtgggacgccaggggcctcgccgtcgccgcgctcctccacgtcgccgccaccgagcccctgttctacgccgcgcacagggcgttccaccgcggccacctcttctcctgctaccacttgcaacaccactccgccaaggtgccccagccattcacagcggggttcgcgacgccgctggagcagctggtgctgggggcgctcatggcggtgccgctggcggcggcgtgcgcggcggggcacggctccgtcgcgctggccttcgcctacgtgctgggtttcgacaacctccgcgccatgggccactgcaacgtcgaggtgttccccggcggcctcttccagtcgctccccgtcctcaaataccttatctacaccccaacgtaccacacgatccatcacaccaaggaggatgccaacttctgcctgttcatgccgctgttcgacctcatcggtggcaccctcgacgcccagtcctgggagatgcagaagaaaaccagcgcaggggtggacgaggtgccggagttcgtgttcctggcgcacgtggtggacgtgatgcagtcgctgcacgtgccgttcgtgctgcggacgttcgcgtcgacgcccttctcggtgcagccgttcctgctgcccatgtggccgttcgcgttcctcgtcatgctcatgatgtgggcgtggtccaagaccttcgtcatctcctgctaccgcctccgcggccgcctccaccagatgtgggccgtcccccgctacggcttccactacttcctgccgttcgccaaggacggcatcaacaaccagatcgagctcgccatcctcagggcggacaagatgggcgccaaggtggtcagcctcgccgctctcaacaagaatgaggcgctgaacggtggcgggacgctgttcgtgaacaagcacccggggctccgggtgcgcgtcgtccacggcaacacgctgacggcggcggtgatcctcaacgagatcccgcagggcaccaccgaggtgttcatgaccggcgccacgtccaagctcggccgcgccatcgccctctacctctgcaggaagaaagtccgcgtcatgatgatgacgctgtcgacggagagattccagaagatacagagggaggcgacgccggagcaccagcagtacctggtgcaggtgaccaagtacaggtcggcgcagcactgcaagacgtggatcgtcggcaagtggctgtcgccgagggagcagcgttgggcgccgccggggacgcacttccaccagttcgtcgtccccccaatcatcggcttccgccgcgactgcacctacggcaagctcgccgccatgcgcctccccaaggacgtccagggcctcggcgcctgcgagtactcgctggagcgcggggtggtgcacgcgtgccacgccggaggcgtggtgcacttcctggaggggtacacgcaccacgaggtgggcgccatcgacgtggaccgcatcgacgtcgtgtgggaggcggcgctcaggcacggcctccggcctgtctga</cdnaseq>

Protein Sequence

<aaseq>MGAAFLSSWPWDNLGAYKYVLYAPLVGKAVAGRAWERASPDHWL LLLLVLFGVRALTYQLWSSFSNMLFATRRRRIVRDGVDFGQIDREWDWDNFLILQVHM AAAAFYAFPSLRHLPLWDARGLAVAALLHVAATEPLFYAAHRAFHRGHLFSCYHLQHH SAKVPQPFTAGFATPLEQLVLGALMAVPLAAACAAGHGSVALAFAYVLGFDNLRAMGH CNVEVFPGGLFQSLPVLKYLIYTPTYHTIHHTKEDANFCLFMPLFDLIGGTLDAQSWE MQKKTSAGVDEVPEFVFLAHVVDVMQSLHVPFVLRTFASTPFSVQPFLLPMWPFAFLV MLMMWAWSKTFVISCYRLRGRLHQMWAVPRYGFHYFLPFAKDGINNQIELAILRADKM GAKVVSLAALNKNEALNGGGTLFVNKHPGLRVRVVHGNTLTAAVILNEIPQGTTEVFM TGATSKLGRAIALYLCRKKVRVMMMTLSTERFQKIQREATPEHQQYLVQVTKYRSAQH CKTWIVGKWLSPREQRWAPPGTHFHQFVVPPIIGFRRDCTYGKLAAMRLPKDVQGLGA CEYSLERGVVHACHAGGVVHFLEGYTHHEVGAIDVDRIDVVWEAALRHGLRPV</aaseq>

Gene Sequence

<dnaseqindica>156..209#289..509#600..832#940..1159#1709..1830#2704..2957#3043..3150#3240..3446#3547..3831#3930..4085#agccgcgttgggtgcaaaaccacaaccgccaacatcttctaactcccctcacggctctccctctccccgcacgcacaacaccggtgaacccctacgtactactgagctgagctgagaggacgaagaagaagatcaagctcgaggggcttgcgatcatgggtgccgcattcttgtcgtcgtggccatgggataacctcggcgcgtacaaggtatttgtgcagtttgctccgttcgttgggttgatcggtttccggcattgttgatggtggattgattgtgtgtgcgcagtatgtgttgtacgcgccgctggtggggaaggcggtggcggggcgggcgtgggagcgggcgagccccgaccactggctgctgctgctgctcgtcctcttcggcgtcagggccttgacctaccagctctggagctcgttcagcaacatgctcttcgccacccgccgccgccgcatcgtccgcgacggcgtcgacttcggccagatcgacagggagtgggactggtacgcacgaacgcgcgctcgccgccggtgcaacttagctcgatcgatcagccagctgaataatctgtgtgttggggtttgcttctgcagggacaacttcttgatactgcaggtgcacatggcggcggcggcgttctacgcgttcccgtcgctgcggcacctcccgctgtgggacgccaggggcctcgccgtcgccgcgctcctccacgtcgccgccaccgagcccctgttctacgccgcgcacagggcgttccaccgcggccacctcttctcctgctaccacttgcaacaccactccgccaaggtgccccagccattcacaggtaagcatgcatctcgcgcgcgccgcccacagatcgagtaccgatccgccgccggcgatcgatcgaagctaattaactccgtcaattgatcgccggtgcatgcgcagcggggttcgcgacgccgctggagcagctggtgctgggggcgctcatggcggtgccgctggcggcggcgtgcgcggcggggcacggctccgtcgcgctggccttcgcctacgtgctgggtttcgacaacctccgcgccatgggccactgcaacgtcgaggtgttccccggcggcctcttccagtcgctccccgtcctcaaataccttatctacaccccaacgtacgtacactccatttcaattcctttttcaaattcagaaaacagtttcgaaattctgacccaaaatttaaatcttcatcaaaattaacggaaacaaaccccccgaccaacaacatgtactggctctggctgcaaatattccaactagagacatgcagtgattctgatgaacctgatcgaccaaacaacctgtagtgctgtacttgcaaggcaacaaaagccggcagacgagccaaactctatctccctaagaacaggcagcttaattaagcttcccggctgctctaattaattcttgccgggtagcgaccaccctaaccacttcactgctcaccattcatcccatgaatgaactatcaaatggttgatgtcttcatccaatcgcgtacgcaattcagacgaccattaaatgcgttggatgcatgcccttttcgcattttttcacacgcattaatcggatctctgaactacaccggcttaatttgcttcctgatcattggttctctcccgtacgcgcgtgtgtgtgactgctggtccgaatccctgcaggtaccacacgatccatcacaccaaggaggatgccaacttctgcctgttcatgccgctgttcgacctcatcggtggcaccctcgacgcccagtcctgggagatgcagaagaaaaccagcgcaggtatgaatcaaatcaaatcgaatcgaaatttaattaagatcgcccgcgagagagatgtttggattgtgtttaattatggcccatatatgcacgagatatgcgcatatcaccggccttaaatttcacatgctgctgctgttcgattgcgttttgcgtgacgcatggacgacccgagctacctgccgttagggagcgttccaatccaaccaatttttagtctttgcagaaaaaaagcaagagagattaggttgataggcaccatgcatgcatcatgcgttttctcagatcaaccgcaagccgttagagaaattttacagttcctcggagatacaaatttttaatgcaaatttgatatcttccataactcttaactcacaataccttcttaattatcgtaaaatcactcaagccgttaaagctcgaattagtaattaagcaagtttgttgtggaaaattaacgatgcatgtgtacgcggaaggttttgcatgcgtgccgatgattagtgcacgattggaccagggccaaattagtgtatgtatccgtcttgagaggacaggtgcccacaggagtagaccgtcctgttcgccgtaatgatctatccgctacacacgttacgtacagcgacggagcgaccccgaccgtgacatgccatccaaccgtctctcgcttttaaacgctgcatgccgctgtcgccggccgcgactccgaccgtatcggatcgccggcggctggcacggccaaaaaaaaacgtacagaatctgctcttggtttctctttttcttgacgattttaattagacccgtgtcgcgccacccgcggcgaggcagagaagctgacgaatggacggtgtggtgtggtgtgggtgtgtgcaggggtggacgaggtgccggagttcgtgttcctggcgcacgtggtggacgtgatgcagtcgctgcacgtgccgttcgtgctgcggacgttcgcgtcgacgcccttctcggtgcagccgttcctgctgcccatgtggccgttcgcgttcctcgtcatgctcatgatgtgggcgtggtccaagaccttcgtcatctcctgctaccgcctccgcggccgcctccaccagatgtgggccgtcccccgctacggcttccacgtaatcctctctcacacacactaatattgtactcctttctgatcgatgctactacttactatcattgttgtgtttttcgctgcagtacttcctgccgttcgccaaggacggcatcaacaaccagatcgagctcgccatcctcagggcggacaagatgggcgccaaggtggtcagcctcgccgctctcaacaaggttgggtcactgttcaacagcaacgttgcaaaaggtaaaggttggggaactgtctactgatgatgatggcgtgcgttgcgtgcgtgcagaatgaggcgctgaacggtggcgggacgctgttcgtgaacaagcacccggggctccgggtgcgcgtcgtccacggcaacacgctgacggcggcggtgatcctcaacgagatcccgcagggcaccaccgaggtgttcatgaccggcgccacgtccaagctcggccgcgccatcgccctctacctctgcaggaagaaagtccgcgtcatggtaatcaaccccaacaccaccacccaactactaatttctagctgcatattgatggcgatcgatcggtcgctgttgctgagacgtatgatgtgtggtgcagatgatgacgctgtcgacggagagattccagaagatacagagggaggcgacgccggagcaccagcagtacctggtgcaggtgaccaagtacaggtcggcgcagcactgcaagacgtggatcgtcggcaagtggctgtcgccgagggagcagcgttgggcgccgccggggacgcacttccaccagttcgtcgtccccccaatcatcggcttccgccgcgactgcacctacggcaagctcgccgccatgcgcctccccaaggacgtccagggcctcggcgcctgcgaggtcagaaccacaacctgaaatcaattcagcctcctcctcgtcgtcttcctttgctggtttgcagatcgatcacacatgactgatctgatcttgtgcagtactcgctggagcgcggggtggtgcacgcgtgccacgccggaggcgtggtgcacttcctggaggggtacacgcaccacgaggtgggcgccatcgacgtggaccgcatcgacgtcgtgtgggaggcggcgctcaggcacggcctccggcctgtctgatcggaacccgcgccgttcgtctcgtcgatccaacggccgcggcgcgttctgggcccccaccaaaccgggcccaagccctcgtcgtcgtcgtcatcgtcgtcgttcttctctttctcctttcccttttcacaggttaatttaaaaacgtcgtcgtcgtcgtcgtcatggtcatcgatcaccatcaaattaaatcattctcgtgtggctcctgactgttcaatttgctgccacaccggcaaatcctccccccgcaccgtgttttgatttgtctgcacgtatatgtataagtatatatactttgatttggcgttggatacataaagagatgagctgtatgaacgtgtagatatatttatatgcctaaaagatgagcagtatatatagctgcgttatttttatc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0426800, RefSeq:Os09g0426800