Os09g0428300

From RiceWiki
Revision as of 07:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0428300| Description = GPCR, family 3, metabotropic glutamate receptor-like protein| Version = NM_001069766.2 GI:297609508 GeneID:4347119| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0428300

Description

GPCR, family 3, metabotropic glutamate receptor-like protein

Version

NM_001069766.2 GI:297609508 GeneID:4347119

Length

4335 bp

Definition

Oryza sativa Japonica Group Os09g0428300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16218847..16223181

Sequence Coding Region

16218847..16219262,16219829..16219943,16221073..16222406,16222920..16223181

Expression

GEO Profiles:Os09g0428300

Genome Context

<gbrowseImage1> name=NC_008402:16218847..16223181 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:16218847..16223181 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcatgtgctagaactgcaccgctcctactcttgttagcattcagctttgcatttgctggaagtgttacagaaagaaaggcagaggaattccatgttggggtggtacttgacctggggacgacggtggccaaggtcgcacgcacaagcatgtcgttggccgtggaagatttcaatgccgtccatccaagctacaccacacggctcgtcctccacgtcagggattccatgggtgatgatgtccaagctgcatctgcagttcttgatttgctggagaatcacaaagtccaaactattgttggtccacagaaatcttctcaagctacatttgtatcagctcttggaaataaatgtcaaattccaattatctcattcacagcaacaagccccacattgtcctcgcgcactcttccttattttgtgcgcgcaacgctgaatgattcagcacaagtgaatagcattgtctccatgattaaggcctatggatggagagaggtggtgcctatctatgtagataacgattacggtaggggtattataccttcccttgttgatgccctccaacagatagatgttcatgttccatatcagagtgagatagatcaatcatcaacaagtgaagaaatcacacaagaactctacaagctgatgacaatgcagacaagggtatatgttgttcatatgtccccttcattgggatcagtcctctttacaaaggcaaaagagattgggatgatgagcgaagggactgtatggatcataacagatggactaaccaacctaatagactcacttaatccttcagttgtggaagcaatgaatggtgccttgggggttaaggtttatgtaccaatttcaacagagctagatagcttcaccaagagatggtatatgaggtcccgaattgatcacccaaacgatccaacaatgaaactgaacatctttggactatgggcttatgattctatctgggcgatagcacaagcagcggagatgtccaaggttagaaaagcaatgtttcagagaccgtccagcgagaaaaacttgacaaatttggaaacattacaaacttcaattaatggtccagcacttcggaaggcaatgttgcaaaataaatttagaggtttaagtggctattttgacctttcagatgggcagctacaagtttccacatttcgaataataaatgtagccgggaaaggatatcgagaaattgggttctggactgctcgaaatggaatttcaaaggcattagagcagaagagatcacatccaacttatgagagtactaaacctgatttgaacatcgttatttggccgggagaggtaacagagctaccaaggggctgggaactcgcagtacgaggaaagaaacttcaagttggtgtagtcaaaggccactatccagaatatatagatgctgatgaagatcccatcacaggtgttactacagctaggggtcttgcaattgacgtatttgaagaggctgtcaaaagacttccttatgccctcgcttatgaatacaaattgtttaacatcacagggattgccagttcaagctatgatgagtttgtctaccaagtttatctcaagaaatacgatatagcagttggagacatagcaattaggtacaacagaagtttatatgtcgacttcactctgccatacacagagtcaggggtagcaatggttgttcctgtcagggaaaaggagaaggtgaaacgcctaatatcacggatagtgttggtcgtatggctgtttttcattctagtacttaagtcaagttacactgcaagcttgacttcaatgttaactgtgcaacagctccaaccaactgcacatgatgttcatgaactcctaaaaaatggtgaatacatagggtgtgggagtggctcttttgtcatgggtcttctggaagaacttggctttcccagatcgatgatcaagccttatcataaccctgaggatattcacaacgcactctccagaggaagcaaaaatggtgggattgctgctctggtgggtgaaattccatatatcaaattatttctcgcaaagaactgcaagaggtacacaatgattggaccaatttataaaactgctggttttggatatgtaagttaa</cdnaseq>

Protein Sequence

<aaseq>MAACARTAPLLLLLAFSFAFAGSVTERKAEEFHVGVVLDLGTTV AKVARTSMSLAVEDFNAVHPSYTTRLVLHVRDSMGDDVQAASAVLDLLENHKVQTIVG PQKSSQATFVSALGNKCQIPIISFTATSPTLSSRTLPYFVRATLNDSAQVNSIVSMIK AYGWREVVPIYVDNDYGRGIIPSLVDALQQIDVHVPYQSEIDQSSTSEEITQELYKLM TMQTRVYVVHMSPSLGSVLFTKAKEIGMMSEGTVWIITDGLTNLIDSLNPSVVEAMNG ALGVKVYVPISTELDSFTKRWYMRSRIDHPNDPTMKLNIFGLWAYDSIWAIAQAAEMS KVRKAMFQRPSSEKNLTNLETLQTSINGPALRKAMLQNKFRGLSGYFDLSDGQLQVST FRIINVAGKGYREIGFWTARNGISKALEQKRSHPTYESTKPDLNIVIWPGEVTELPRG WELAVRGKKLQVGVVKGHYPEYIDADEDPITGVTTARGLAIDVFEEAVKRLPYALAYE YKLFNITGIASSSYDEFVYQVYLKKYDIAVGDIAIRYNRSLYVDFTLPYTESGVAMVV PVREKEKVKRLISRIVLVVWLFFILVLKSSYTASLTSMLTVQQLQPTAHDVHELLKNG EYIGCGSGSFVMGLLEELGFPRSMIKPYHNPEDIHNALSRGSKNGGIAALVGEIPYIK LFLAKNCKRYTMIGPIYKTAGFGYVS</aaseq>

Gene Sequence

<dnaseqindica>3920..4335#3239..3353#776..2109#1..262#atggcagcatgtgctagaactgcaccgctcctactcttgttagcattcagctttgcatttgctggaagtgttacagaaagaaaggcagaggaattccatgttggggtggtacttgacctggggacgacggtggccaaggtcgcacgcacaagcatgtcgttggccgtggaagatttcaatgccgtccatccaagctacaccacacggctcgtcctccacgtcagggattccatgggtgatgatgtccaagctgcatctgcaggtatgaatcatttgattgcttatgcaagattagcacaaactgcaaaatttatcactggctgagacatggatagaagcacacatcatttttatattatcatgtttttatcttaaaacgagagaatcccagcctctcggtcattcttctcttaaaccatcaaccaacaattcccagtcccattgtcacaggcaataaaaaacgagaggtaaaattgcacgtaacatgataacagttttacatgatttgtgaatcttagttcttcggtgcaacaatattttttgaggatgaccaggatggaaaagctgaagggaagggatctaggagaaagatggtaccgtaggcgagcaataaaactttaattaaatgagagtacaaggaatagaactttagatgagatggtgaatatatcattgtttgtcttgctttattcataatggtagttctggtttaagaactgtttgaatataaaatatttgctcttatgaacttttttgtttatatgccattcggcagttcttgatttgctggagaatcacaaagtccaaactattgttggtccacagaaatcttctcaagctacatttgtatcagctcttggaaataaatgtcaaattccaattatctcattcacagcaacaagccccacattgtcctcgcgcactcttccttattttgtgcgcgcaacgctgaatgattcagcacaagtgaatagcattgtctccatgattaaggcctatggatggagagaggtggtgcctatctatgtagataacgattacggtaggggtattataccttcccttgttgatgccctccaacagatagatgttcatgttccatatcagagtgagatagatcaatcatcaacaagtgaagaaatcacacaagaactctacaagctgatgacaatgcagacaagggtatatgttgttcatatgtccccttcattgggatcagtcctctttacaaaggcaaaagagattgggatgatgagcgaagggactgtatggatcataacagatggactaaccaacctaatagactcacttaatccttcagttgtggaagcaatgaatggtgccttgggggttaaggtttatgtaccaatttcaacagagctagatagcttcaccaagagatggtatatgaggtcccgaattgatcacccaaacgatccaacaatgaaactgaacatctttggactatgggcttatgattctatctgggcgatagcacaagcagcggagatgtccaaggttagaaaagcaatgtttcagagaccgtccagcgagaaaaacttgacaaatttggaaacattacaaacttcaattaatggtccagcacttcggaaggcaatgttgcaaaataaatttagaggtttaagtggctattttgacctttcagatgggcagctacaagtttccacatttcgaataataaatgtagccgggaaaggatatcgagaaattgggttctggactgctcgaaatggaatttcaaaggcattagagcagaagagatcacatccaacttatgagagtactaaacctgatttgaacatcgttatttggccgggagaggtaacagagctaccaaggggctgggaactcgcagtacgaggaaagaaacttcaagttggtgtagtcaaaggccactatccagaatatatagatgctgatgaagatcccatcacaggtgttactacagctaggggtcttgcaattgacgtatttgaagaggctgtcaaaagacttccttatgccctcgcttatgaatacaaattgtttaacatcacagggattgccagttcaagctatgatgagtttgtctaccaagtttatctcaaggtaagaaataacttgtttggccaccatgttaaaatataggggaaattttcctccttagtattcaacattttacttctttcgaaataatatatgtaaatttaaaggtagttccactttcttttcacccacacattctgtttgatctaatggctcatgttcatcatggcaaccgattacccctagtgagataatagatcacccttgaacgatacaaggcaataaaggcatccattgcagcatatttccttagcaacagatagaaaattaggaacacactaagtcgctaattatatgcgtgttaactattgcgctgacaaaattacagtcacagggtttataaaataaaagcaatatgacactcacaggatccttttaaaagactctggtagtggtggtattgaatctgtcacctaacctttcctcactggagttctttttttatggaaatgctccctcctatagtacattagtccgaatatagttgaattgatgtgtgtataatcaaggtgaacactcctgatgcacacaagtgaataccatatttcatacaaatatatttaatttattttaggcaattctatggcatttttctttcatttgtagaaaagcacaggcatttagctagtacaaataaagtatggacttcatcaaaataattcagtgtggaatacaaatagaaatcaaatatacgttaaagttgaaattcatataatctatttgcattatgtatattaccatatctcaaattttaaagaactatcttatttctaaatagttttaatttcaaggatgtatgcagcagttatatcgtttcaaatatttaaaagtattgtccaccgcgatacttttaagaaaaaaatatcctaagtacatattatatgtaatcatgataaacaaatgtcatgccaaatcattggcctttgggatacggtttgccaatattttaatgcatttgccaaagcactttcagcattccattttaacaagtgacggatgaaagagggtataaacaattggtatatattagagaagtcacattaatttggcatcttagttttcttaatcatgactctttgtttgtaaaaagcagctcgcagtttgttaacaactctctttgataccctgacagaaatacgatatagcagttggagacatagcaattaggtacaacagaagtttatatgtcgacttcactctgccatacacagagtcaggggtagcaatggttgttcctgtcagggaaagtataaacaagaatgcttggattttcttgaagccattaacgcctggcatgtggtttggaacaatcatggtcgttatctatacaggagttgtcatatggctgttggaacttctaggaaacaacaagaatgtggatgctactatttccagacagtcgatgacatcaatctacttttctatgtttgaagatagttgagtgccctcattgcagtatatttgttttctatttcactttggatagaaacactaagtacaagattagtgtccctttgcctggaaagacattatcatacaaagttcaatagggtgtacccaatttatatggtttctacaaaacaaactaaatttataatacatgactactgatgctccagatacatggcaaatttgtctgtagtaagctttaatcaacctagcattatatttaaaacatgaaagaaggcatatcaacattatgtgtatatagagaaaatgtgattgaaatgtagcatatcttaagtttgatctactggagtttgatttaagatgtctaaaaaataactgaactctttgtcctattctattgcagaggagaaggtgaaacgcctaatatcacggatagtgttggtcgtatggctgtttttcattctagtacttaagtcaagttacactgcaagcttgacttcaatgttaactgtgcaacagctccaaccaactgcacatgatgttcatgaactcctaaaaaatggtgaatacatagggtgtgggagtggctcttttgtcatgggtcttctggaagaacttggctttcccagatcgatgatcaagccttatcataaccctgaggatattcacaacgcactctccagaggaagcaaaaatggtgggattgctgctctggtgggtgaaattccatatatcaaattatttctcgcaaagaactgcaagaggtacacaatgattggaccaatttataaaactgctggttttggatatgtaagttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0428300, RefSeq:Os09g0428300