Os09g0431500

From RiceWiki
Revision as of 07:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0431500| Description = Similar to TATA box-binding protein associated factor 10| Version = NM_001069773.1 GI:115479288 GeneID:4347127| Leng...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0431500

Description

Similar to TATA box-binding protein associated factor 10

Version

NM_001069773.1 GI:115479288 GeneID:4347127

Length

3501 bp

Definition

Oryza sativa Japonica Group Os09g0431500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16435093..16438593

Sequence Coding Region

16435406..16435486,16436919..16436969,16437057..16437114,16437698..16437760,16438102..16438166
,16438263..16438442

Expression

GEO Profiles:Os09g0431500

Genome Context

<gbrowseImage1> name=NC_008402:16435093..16438593 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:16435093..16438593 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggggagcaacagcgcaggcggaggcggcggtggcgccatggttccggggggcatggggggaggagggcccatgggggcagccgccgccggcggcggcggcggcggagacgggcggcacgacgacgaggcggtcctcaccgagttcctctcctccctcatggactacacccctacgattcccgacgagctggtggagcactaccttggccgcagcggcttctactgccccgacctccgcctaacgaggctggttgctgtagccacccaaaagttcatttcggacattgcaagcgactctcttcagcactgcaaagccagggtagcagcacctatcaaagataacaagagcaagcaacctaaggataggcgtcttgtgttaacaatggatgatctttccaaggccttgcaagagcacggtgtgaacttgaaacatcctgagtacttcgcagacagcccttctgcaggaatggctcctgcagcaagagaagagtag</cdnaseq>

Protein Sequence

<aaseq>MMGSNSAGGGGGGAMVPGGMGGGGPMGAAAAGGGGGGDGRHDDE AVLTEFLSSLMDYTPTIPDELVEHYLGRSGFYCPDLRLTRLVAVATQKFISDIASDSL QHCKARVAAPIKDNKSKQPKDRRLVLTMDDLSKALQEHGVNLKHPEYFADSPSAGMAP AAREE</aaseq>

Gene Sequence

<dnaseqindica>3108..3188#1625..1675#1480..1537#834..896#428..492#152..331#actcccctccctcttcccccctccttctcgagcctccggcgacgacgacgactcccgccgctcttcctggtccatcggcggcgaacttccccgccgacgtgccagatctcaaaccccactagctcctccggcgaaggcgggggaccagaggatgatggggagcaacagcgcaggcggaggcggcggtggcgccatggttccggggggcatggggggaggagggcccatgggggcagccgccgccggcggcggcggcggcggagacgggcggcacgacgacgaggcggtcctcaccgagttcctctcctccctcatggactacacccctacggtacggcgcctgccgcccatcttgccctagcttccccctctcttgggtttcgtgtctgatgcggtggtggtggtggtggtggtggtggtgcggcagattcccgacgagctggtggagcactaccttggccgcagcggcttctactgccccgacctccgcctgtaagcacccccatctatctctccaatagttcaatctcttctctctttcaggaagactgcaccgtgccttccaggatgggccaattggtagttattaaactgaaattcgtccagtgcccggaaatcactgaagagatttggactgaattttgcctgattcttagtacgtacaacatggtgacagttagatctgattgaggctgttaggattgcattgtaatgcagcgtgttgccattctagtcgagggagaaaatcgctgtatccctttcagcttggtgattgttggtcgtcatgtgtgacagcatggccttatgaaccataatttttgtgttctctgcagaacgaggctggttgctgtagccacccaaaagttcatttcggacattgcaagcgactctcttcagtatgtaacttttactgcctcattcgttttgttttccaacttaaacgtatgtgcgattattttgttcctttttagtggttatcgattcttggagtcgaattttcgttaccttcagatagtgaatgagaaatatgatttctgatgatggtcatgaaccatgaggtttcttgcatcattcataaatggaggtgtatgcaatatgcttcattcttgagatgttgagtagcctcatttctcctatgctggcagctttttgagataaccatgttgattttaggcttgttttcttcatactgtcaacttgcatcttctttgtgcttccttttttttgtttctatcatccttctcacattatgaccatggaatgaaacatcaaacatggtatcttatgtctatattgttaagacaatagattgcgaaatatgcataacattgatgtggtagggaatctaatttcagtactgactgaaactttatgtgtaaagtcaagcttcttatggtgttgcttgtatcataacttgtgacagttaaaaggtatcatgcacactaatttgttcatcacatgattattgtcctgaactaggcactgcaaagccagggtagcagcacctatcaaagataacaagagcaagcaacctaaggtgggtttaattgcagttggtgtaccatggtactactagcatgaaatcagtacttttatttactggttcagtcattctgttcttcaggataggcgtcttgtgttaacaatggatgatctttccaaggccttgcaagaggtaaaccattttcctgttgaatttaagctttcccttttactgcagctcaccagttaccactgtactttacgtgattgaagtcacagtttattcagtttgacgtataattgcaattattagttttattaggacttgaatctctgcattaataaatctactgtagaatggatttagttaaccttttttagaccaatgggattacttgttaatgttttttttaatgaaacaagtagccaaattgatcagttgtatatgcttcacgatgctcacgattaatcacaattcagatagactaatcaactcaacaatcagtcacagcctacttgtattggaatattttaccagaagaacaaatgggaaactattttgatcccttgaggggatgtgccgcttaaaaatcatctaaacggttatgaaaaattctagaaaaatttgacaacacttatacaacatatctatacaacttcacaaaatcttaagtccaaattcaactcacacatcgagatataaaaaaagacaaattcagcgtataaatagtaccgcactgttaatatctgaatttgtctttttgggttctcgatgtgtaggtcgaatttgaactttatttttggtggactattagatataattgtactctacattgtcaatatttttcagaatttttaacaactatatttgcattgattttgaaagaaaaatatatacgaggggacatcccctcgagggattagaatccactccccagaacacatacattatagtacatgaaataagcatttaagcagacctgggatgagctgctcatatacagggatgagctgctcatatacaggtctatttgacaaatgatcttctatgctttcccttcccagcaatattcttggcaaatgactgattcagctataatcacatcatggtcagtacacttatgtttacaattccatggttcagaatcaatctaccttctacacacgaaacctcacacaaaagggcatccttgacatgtcacaatatcacataactctggactgtaatgctctacagatgagctatcattatagaagctttgtgctttcatgaaatatgtttgttccacatactaccaatttgagatttatttttgttttctaacatgctggcagctatcagtagatcatcacgtcatttgatagaattagattaccattgtccagcgtttagtattgtaactcctaattatcctaattaggcatttatgtttgatgcattttgagaaactggcactttttactcccgtgtcaaatgccaatatagatcacaaatgtgtacatcaaatcctctatggtggtgcagtaagctggtaaccactgactataggctagtaggctcctttttaccaaacatgtataccaatgcttaatttctgatgtgcaccatacttatttccttgcagcacggtgtgaacttgaaacatcctgagtacttcgcagacagcccttctgcaggaatggctcctgcagcaagagaagagtagactcaactgaactcaaagtgaaaccagggactatgtagggagcatgcaaatgaatgaccatgtcggcatccttacccaaccttattacagcatgcaaatgaatgaacctgtcagcatccttaccgaccttattacaacctgatgtctgttccttgatatactattgaccattagcttgtaactaatagtctaataccactggttgcttctgtacttagtatgaagtactatctgtgctgattgattcctctgtgtgaaacctgttttaaattgcctggtggatccttgacagctgaaaactaattgactttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0431500, RefSeq:Os09g0431500