Os09g0442100

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0442100| Description = Protein kinase-like domain containing protein| Version = NM_001069823.1 GI:115479388 GeneID:4347179| Length = 2929 b...")
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Gene Name

Os09g0442100

Description

Protein kinase-like domain containing protein

Version

NM_001069823.1 GI:115479388 GeneID:4347179

Length

2929 bp

Definition

Oryza sativa Japonica Group Os09g0442100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17076001..17078929

Sequence Coding Region

17076248..17076949,17077571..17077707,17078126..17078261,17078383..17078784

Expression

GEO Profiles:Os09g0442100

Genome Context

<gbrowseImage1> name=NC_008402:17076001..17078929 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17076001..17078929 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcgcaatcttggaggtccttcatgtgctgcggcggcggcgctgccgtccacgacgacgacgactcggcgccgaggcggcggaggatcgcgcgcaggggggacagcccgaggtcgtcgtcgaggatgtcgttcacgagcctcagctcgtcggggacgctgtcgccggaggacctgtcgctgacgctgtccggctcgaacctgtacgccttcacctacgccgagctccgcgccgcgacgggcagcttctcccgcgccaactacctcggctgcggcgggttcggccccgtctacaagggcgccgtcgacgacggcctccgcccgggcctcgccgcgcaggacgtcgccgtcaagtacctcgacctggactgcggcacgcagggccacaaggagtggctggccgaggtgttcttccttgggcagctgaggcacaagaacctggtgaaattgattggttactgctatgaagccgagcatcggatgctggtgtacgagtacatgagcggcgagagcttggagaagcatctcttcaaaactgtcaatggttctcttccatggatgacaaggatgaagattgccctcggcgcggcgaaaggcctcgcattcctccatgatgccgatccgccggtgatctaccgcgatttcaaggcatccaacatcttacttgacctggattacaataccaagctgtccgactttggcctagctaaggatgggccccagggtgacgctacgcacgtaacgacacgtgtcatgggaacacatggatatgcagctcctgagtacatcatgacggggcatttaacagctaagagcgatgtgtatagttttggagtggtattgttggaacttctctcggggcgaaagtcagtggaccgctctcgacgcccgagagaacaaagcctggtggattgggctagaccatacctcaagtgggccgataaattgtacaaggttatggaccctgctctcgagtgccagtactcgtgccagggtgctgaggtggcggcattggtggcgtacaagtgtctgagtgagaaccctaagtccaggcccacaatgagggaggttgtcaaagccctggagcctgtgcttggcatggatgacttcttcccagttggcccatttgtcttcactgtcattgtggaggacgagaaggtggttaacatgaaggtggacatgaaggttgaggttgaggagaagaaaaacactcaccaaaaccatcaggacaggcatcgacagaagtacccagactcggcgattcacgctggcattgtgctgcatgaccgtgatggtgtcatcggaggagggtacaccggtgcgctgcgacgacaccggaggacggcgagctacaacaaggagaggggagcatag</cdnaseq>

Protein Sequence

<aaseq>MAAQSWRSFMCCGGGAAVHDDDDSAPRRRRIARRGDSPRSSSRM SFTSLSSSGTLSPEDLSLTLSGSNLYAFTYAELRAATGSFSRANYLGCGGFGPVYKGA VDDGLRPGLAAQDVAVKYLDLDCGTQGHKEWLAEVFFLGQLRHKNLVKLIGYCYEAEH RMLVYEYMSGESLEKHLFKTVNGSLPWMTRMKIALGAAKGLAFLHDADPPVIYRDFKA SNILLDLDYNTKLSDFGLAKDGPQGDATHVTTRVMGTHGYAAPEYIMTGHLTAKSDVY SFGVVLLELLSGRKSVDRSRRPREQSLVDWARPYLKWADKLYKVMDPALECQYSCQGA EVAALVAYKCLSENPKSRPTMREVVKALEPVLGMDDFFPVGPFVFTVIVEDEKVVNMK VDMKVEVEEKKNTHQNHQDRHRQKYPDSAIHAGIVLHDRDGVIGGGYTGALRRHRRTA SYNKERGA</aaseq>

Gene Sequence

<dnaseqindica>1981..2682#1223..1359#669..804#146..547#aaggctcacctcctcctcttccctctccggcatctccatctctcagctcctctgctagctcgagctgctcttcccggatcctagccacatttcttggttctgatctctctcgggttgttttgaaattttctttggttcaattgccatggccgcgcaatcttggaggtccttcatgtgctgcggcggcggcgctgccgtccacgacgacgacgactcggcgccgaggcggcggaggatcgcgcgcaggggggacagcccgaggtcgtcgtcgaggatgtcgttcacgagcctcagctcgtcggggacgctgtcgccggaggacctgtcgctgacgctgtccggctcgaacctgtacgccttcacctacgccgagctccgcgccgcgacgggcagcttctcccgcgccaactacctcggctgcggcgggttcggccccgtctacaagggcgccgtcgacgacggcctccgcccgggcctcgccgcgcaggacgtcgccgtcaagtacctcgacctggactgcggcacgcagggccacaaggagtggctggtgagtgcgaaacagagcgttcttggcaatgcaccagctcgatcgatcagatgataatcgaacacaattcagctaattgaatccacctaattgaattgcggatttgggtttgttcatgtaggccgaggtgttcttccttgggcagctgaggcacaagaacctggtgaaattgattggttactgctatgaagccgagcatcggatgctggtgtacgagtacatgagcggcgagagcttggagaagcatctcttcaaaagtgagtccttgtctttcaacttgaatcaggttgatttggtcgaatttgagagtacagtagttttttgagaccaaaaagttaaaaaaggagtacccaattccacatcttttcgtaaataaagaaagagggagtacgcaacttagaaatttgagcacgtatgggtgacatatggtcgtccacttacgatgagctgttcctgtctccctgcctttagttcctcccttttttctcccttttctcaaagtcaaggtctctaggtgagctgttatatgactcaacaaatataaaaactcatgtttcttttcaaaaaaaaaaactcatgtgtttttattaggtggtcacattttgtcaaaaaaaaaacagcttgttgaacaatgtggaggaggaaactgacttgaaacatatttatctcctgcagctgtcaatggttctcttccatggatgacaaggatgaagattgccctcggcgcggcgaaaggcctcgcattcctccatgatgccgatccgccggtgatctaccgcgatttcaaggcatccaacatcttacttgacctggtgagccaccctacaattcagttccaatgtagtgtaattgttattcatttattccaatggtagattagaacttacagttcaaagttcaaacaccacattgtcaagaaatgacacggtttctgaaatgtccctttcatttgggaacagtaagttcagttaccaacaaatggggtcagtcaggcagcacacgtcacttctggatgaatgcgaaattagtaaatgtttggggcccaaattcaaggctgccacaaacaaccttcgcaaaaaatgacttcattttttgatcgagaatttaaactttttgaccaattgaatcattccaatgaccgtgcaaaaatatccagctgcgccacacgtttctgaactatgcttgcagtggcccagttcgttatgggcaaaagccttgacttggctgattagaactttggaagatgcatgccaaacttcagaaatcctagcaatcctgccctcacatcattcacctaatcaaaaatatctagccgtcattatccacctcacccaagtagcccacggattattaatacatgaatagctttgcaagtgatatcttgatatcccacttccattcacattactaaatctcaacttgtgtgttttcaggattacaataccaagctgtccgactttggcctagctaaggatgggccccagggtgacgctacgcacgtaacgacacgtgtcatgggaacacatggatatgcagctcctgagtacatcatgacggggcatttaacagctaagagcgatgtgtatagttttggagtggtattgttggaacttctctcggggcgaaagtcagtggaccgctctcgacgcccgagagaacaaagcctggtggattgggctagaccatacctcaagtgggccgataaattgtacaaggttatggaccctgctctcgagtgccagtactcgtgccagggtgctgaggtggcggcattggtggcgtacaagtgtctgagtgagaaccctaagtccaggcccacaatgagggaggttgtcaaagccctggagcctgtgcttggcatggatgacttcttcccagttggcccatttgtcttcactgtcattgtggaggacgagaaggtggttaacatgaaggtggacatgaaggttgaggttgaggagaagaaaaacactcaccaaaaccatcaggacaggcatcgacagaagtacccagactcggcgattcacgctggcattgtgctgcatgaccgtgatggtgtcatcggaggagggtacaccggtgcgctgcgacgacaccggaggacggcgagctacaacaaggagaggggagcataggaatagaggtggggaacagagtaggagaaaaaggtcatgcatgtacatatgctggtgagggtgtggcagaatgccacatttgattgggtttagtttttggtgttgtcattttttagctttcttcttgatggtgacagtgggtgggtgtaagataatacaggaatgcaaaatagtgtgatgaaaagttaggcttggatttgcaaggattgttggatgttgtacgcaatcaaatggtctagttaaaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0442100, RefSeq:Os09g0442100