Os09g0442900

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0442900| Description = Similar to Axi 1 (Auxin-independent growth promoter)-like protein| Version = NM_001069829.1 GI:115479400 GeneID:43471...")
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Gene Name

Os09g0442900

Description

Similar to Axi 1 (Auxin-independent growth promoter)-like protein

Version

NM_001069829.1 GI:115479400 GeneID:4347185

Length

4627 bp

Definition

Oryza sativa Japonica Group Os09g0442900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17130777..17135403

Sequence Coding Region

17130898..17131410,17132530..17132650,17132738..17132809,17132893..17132963,17133040..17133128
,17133287..17133419,17133503..17133733,17134073..17134551,17134682..17134889

Expression

GEO Profiles:Os09g0442900

Genome Context

<gbrowseImage1> name=NC_008402:17130777..17135403 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17130777..17135403 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctaccaccagcccgtacacggcggcgccgcggccggtgccggcgggagtggcggcggtggcggcggcgaccacctgcatcagcatcaccacccgcggttgcacagcccgcggatatccgggggcgggtcgatgacccggcgtgccaactcgttcaagcgcggggagatcgagctccagatcggctcgccgcgctcgccccgcggcgacggcgtcgggagccccctcgccgagtcgtcgtcggcgtccgaggcgtccgcgggcggcggcggcgcggtccaccaccaccaccaccagagccagcagcagcagctccggttccgcctcttcaagcggccggggtccggcgccggggaggtcgtgctcgggctggggatccgggagaggaggcggattgggaacctgctgttcctcgcgttctgcggcgtgtgcctgctcctcggcgtcgccaagatctgggcgggcggctggttcgccctccccggcgacgacaaggacgctgatttgcaggatctctcaatctcattctccagtgatggagggtatcaatttgatagccactttggacatgttggagggaaagagagtgacaggatgttgatgacagtgggatcagaagacagtgttcctgaggcccccgatgtctggtcccagccaagcagcggaaagttcagacaatgcattatttcgaattctcataaaaaggaagattctcacacaaatggatacattctcattaacgcaaatggaggtttgaatcaaatgcggtttgggatatgcgatatggttgctgttgctaagatcctgaaggctacattggttctaccttcacttgatcatacatctttctgggcagatgacagtgaatttaaggaccttttcaattggagacacttcattgagtcactcaaagaagacattgatattgttgaaatgctgcccccagcatacaagcatattgagcctgtggctaaagctccaatatcttggtcaaaggtgaattattatagagatgaaattctccctcttttgaaaaaacacaaagtcatttactttacgcatacagattctcgccttgccaacaatggtcttcctagttatattcagaaattaagatgccgagttaactataggtctttgaagtattcccaaacaattgaagatcttggtgctaccttggtttcacggatgcatcaggatggaagcccatatcttgctctccatctaaggtttgagaaggatatgctagcttttactggttgcagccatagcctgacatcagaagaagaagaagaattgcgtaaaatgcgttatgaggttagtcattggaaagagaaagaaataaatggaactgagagaagaagtatgggtggttgtcctttgactcccagggaaacttcgtttttactcaaaggattgggtttcacacgaagcaccagaatctacttggttgcaggtgaagcttttggcaatggaagcatgcaggcgctgatggatgattttcccaatatatattctcattctacccttgcaacaaaagaggaacttgagccctttagaaatcaccaaaatatgcttgctggtcttgactacattgtagctctccagagtgatgtctttctttacacgtatgatggtaatatggccaaagctgtacaaggtcataggcgtttcgagaacttcaggaagacgatcaacccggataggatgagtttcgtgaacctgatagatgaatatgatgaaggaaggatgtcttgggatgacttcagctcagaagtgaaacgtatacatagagatggagagcgaataggggctccatatctcagggagcctggggaattccccaagctagaagagtctttctttgcaaatccgttgccgggctgtatatgtgagaagcttaatgacgagtga</cdnaseq>

Protein Sequence

<aaseq>MGYHQPVHGGAAAGAGGSGGGGGGDHLHQHHHPRLHSPRISGGG SMTRRANSFKRGEIELQIGSPRSPRGDGVGSPLAESSSASEASAGGGGAVHHHHHQSQ QQQLRFRLFKRPGSGAGEVVLGLGIRERRRIGNLLFLAFCGVCLLLGVAKIWAGGWFA LPGDDKDADLQDLSISFSSDGGYQFDSHFGHVGGKESDRMLMTVGSEDSVPEAPDVWS QPSSGKFRQCIISNSHKKEDSHTNGYILINANGGLNQMRFGICDMVAVAKILKATLVL PSLDHTSFWADDSEFKDLFNWRHFIESLKEDIDIVEMLPPAYKHIEPVAKAPISWSKV NYYRDEILPLLKKHKVIYFTHTDSRLANNGLPSYIQKLRCRVNYRSLKYSQTIEDLGA TLVSRMHQDGSPYLALHLRFEKDMLAFTGCSHSLTSEEEEELRKMRYEVSHWKEKEIN GTERRSMGGCPLTPRETSFLLKGLGFTRSTRIYLVAGEAFGNGSMQALMDDFPNIYSH STLATKEELEPFRNHQNMLAGLDYIVALQSDVFLYTYDGNMAKAVQGHRRFENFRKTI NPDRMSFVNLIDEYDEGRMSWDDFSSEVKRIHRDGERIGAPYLREPGEFPKLEESFFA NPLPGCICEKLNDE</aaseq>

Gene Sequence

<dnaseqindica>122..634#1754..1874#1962..2033#2117..2187#2264..2352#2511..2643#2727..2957#3297..3775#3906..4113#actcgcctccttcccttccgagaccacgcgcgaactgccccatgacactccctcctcctcctcctcctacttaactaggaaatcttcgcgcgccagctgatcgtataccacgtacgtacacatgggctaccaccagcccgtacacggcggcgccgcggccggtgccggcgggagtggcggcggtggcggcggcgaccacctgcatcagcatcaccacccgcggttgcacagcccgcggatatccgggggcgggtcgatgacccggcgtgccaactcgttcaagcgcggggagatcgagctccagatcggctcgccgcgctcgccccgcggcgacggcgtcgggagccccctcgccgagtcgtcgtcggcgtccgaggcgtccgcgggcggcggcggcgcggtccaccaccaccaccaccagagccagcagcagcagctccggttccgcctcttcaagcggccggggtccggcgccggggaggtcgtgctcgggctggggatccgggagaggaggcggattgggaacctgctgttcctcgcgttctgcggcgtgtgcctgctcctcggcgtcgccaagatctgggcgggcggctggttcgccctccccggcgacgacaaggacgctgatttgcaggtatggaagctataaattcctttccagttttagactttctagctgctattttggcaagctttcttcttcggagtcaacaacacgtgtagtttgaggaaagttgcatgatcctctgaaatgttctgtccgtacatttcttaacgaacaaactatatatcctgctgttacttaattcgaaggtctttgaagactatgaaatcatgctagcttgctaatgttcaactgtaatttccgcacgaacttctgatccttggtgttccaatttgtaagcatgcagtttggccatcctatttgttccataccgtaactctgcaatttcatgttctggagtctggacaaagcaacaagagttgaaaacagaaatgtttgaaatcttgacaggtttttagacagttgaatgtgatacttggggaaaaaaaattgtggtggaagagatgttagaatggagttactgcattttagatttgcatggaccttattgaatagggatattttacaggagatttagcattttaatttttaggacagtgtcttacttgcttggtatgtctataccaactaatttactacgaaaacgcttctttggtgcttttggccattggcagttggatgcagttaagttttggatcttacgaaatatattttgtttgtacgttcaatagtttattgtagtagtcaggcagtcaacttgagtttattgtataaaaaatttagataactcgagaggttccatactccatttgttaccaaggttaattataagggacatcatgtgggatggagatgggattcagagcgctgcaaccttgagctagcttaccagccaaccgtttgtcattgtttgatcttcccaagtaggatgtgttgatctctttatctcaagtcagtaatttcacttctagtttttaccatggtgccctctctatctctactaataactcaatgtctgaatcatagcattgcatcgacataatttagttaatccttttagtaacattttttctattacaagcttattttgctgttctaacatttcacgaagtttgtatctacttaccttgttgacccaaattgttgatcttacagtgtaatttggttttgtgctgtccatgtttctaggatctctcaatctcattctccagtgatggagggtatcaatttgatagccactttggacatgttggagggaaagagagtgacaggatgttgatgacagtgggatcagaagacagtgttcctgaggctagtaatacatctctgcctcgacctttttggttcacacattaattagtggaacataacatttattttggctggtgcttcatgtaggcccccgatgtctggtcccagccaagcagcggaaagttcagacaatgcattatttcgaattctcataaaagtaagttggtctgtattaataccttttggtctcttcaatactcctttattaacaaggtatggtcttctgttcttaatttgtagaggaagattctcacacaaatggatacattctcattaacgcaaatggaggtttgaatcaaatgcggtttggggtgtgactcctgtcctactttttgactttaggttaccattagtgtgctatggtctgatacatttttcatgttgcagatatgcgatatggttgctgttgctaagatcctgaaggctacattggttctaccttcacttgatcatacatctttctgggcagatgacaggttgtgctttaacatagtttcttcatccataatctcctaaaaactaaaggatctcctctctttctcaaaaaaaaaaagatagaaagaaagaatagaaaactaaacttttcaatcaatgtgtggccataatgcctattctgatttcctcatttctgtagtgaatttaaggaccttttcaattggagacacttcattgagtcactcaaagaagacattgatattgttgaaatgctgcccccagcatacaagcatattgagcctgtggctaaagctccaatatcttggtcaaaggttgaaactaggtttttatctataatttacattaatatatgatggatagtcggaaacactaactagtgttttatcttgtgcaggtgaattattatagagatgaaattctccctcttttgaaaaaacacaaagtcatttactttacgcatacagattctcgccttgccaacaatggtcttcctagttatattcagaaattaagatgccgagttaactataggtctttgaagtattcccaaacaattgaagatcttggtgctaccttggtttcacggatgcatcaggatggaagcccatatcttgctctccatctaaggcaagttcggtgctcctaacattgttgtaggatgcttctctctgcactcattactttcgttcttctgtgcataataatctaagttaagtaaaggcaaccctgattttcttaattttgaaggttttccacaagctgcagcttctattattttgaacccgagcaagaactgtttatctctaaactattgagcatatgtgagctagatatggctaacttgttgtattgatagattatgcatgttgttttataatgtagatgcttgtgtagatgaaactatcacggtgccctttgaaataaggctcactgaagcaggggtgtaattttggtgaaaatttgcaggtttgagaaggatatgctagcttttactggttgcagccatagcctgacatcagaagaagaagaagaattgcgtaaaatgcgttatgaggttagtcattggaaagagaaagaaataaatggaactgagagaagaagtatgggtggttgtcctttgactcccagggaaacttcgtttttactcaaaggattgggtttcacacgaagcaccagaatctacttggttgcaggtgaagcttttggcaatggaagcatgcaggcgctgatggatgattttcccaatatatattctcattctacccttgcaacaaaagaggaacttgagccctttagaaatcaccaaaatatgcttgctggtcttgactacattgtagctctccagagtgatgtctttctttacacgtatgatggtaatatggccaaagctgtacaaggtcataggcgtttcgagaacttcaggaagacgatcaacccggataggttacatcctttcctccttggaaatgctctgtggttatatttgttgcacacaagacgacgttgaatgccaaatagctgtctttgacatgtgtttccttttttttgtaatgtcttattctttgtattgcaggatgagtttcgtgaacctgatagatgaatatgatgaaggaaggatgtcttgggatgacttcagctcagaagtgaaacgtatacatagagatggagagcgaataggggctccatatctcagggagcctggggaattccccaagctagaagagtctttctttgcaaatccgttgccgggctgtatatgtgagaagcttaatgacgagtgaatatgtatatatttgacgattctttaaccatctacgccacaggtcaggagttcaggatatatagtgcccctctgctccttgacagtgggtcagcagcaatatgcacaattatttagtcatgatcacttgaccagtgaattcgtgctgatgagagttcagagacgagacaccaattttcaggttcatcccacaaaagtttgctgcatgaagatcatcagatattgcaaatacgaaaaccatgtgagaagtctggcagctgctaatcaattttccagcagccagagcatgccatctgagaaggctggaacatcagagcaactgcaatcagtatacggaaggtaaataccgcggaggagattacacttacggctttgtattgccaatttgccatatcataggttttttggtgcacatggtgcttcccaatcttgctgttgctaagctgtattttgtgtagactcaatacaactgaattttgtcacttgtattttatctggatatattgaattaaacg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0442900, RefSeq:Os09g0442900