Os09g0445500

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0445500| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001069838.1 GI:115479418 GeneID:4347197| Length = 143...")
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Gene Name

Os09g0445500

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001069838.1 GI:115479418 GeneID:4347197

Length

1432 bp

Definition

Oryza sativa Japonica Group Os09g0445500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17263898..17265329

Sequence Coding Region

17264026..17264200,17264270..17264985

Expression

GEO Profiles:Os09g0445500

Genome Context

<gbrowseImage1> name=NC_008402:17263898..17265329 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17263898..17265329 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgagcacgacgcgaaacacgtcggagacgtgccggcggccgcgggcatcgagtcgttctcgcagctgccgttcgtgcgcccgaggccggcggcgatggccggctccagccccgcgtcgtccatccggctgttcgggttcgagctcccgcccgacggcgtcgtctccgccgccggattaggaggcggcggcggcggcggcgggcgcaagttcgagtgccactactgctgccgaaacttcccgacgtcgcaggcgctgggcgggcaccagaacgcgcacaagcgggagcggcagcacgcgaagcgcgcgcagttccagagcgccatggccatgcacgcgcactacccggcctaccctgcctacgccagctactacggctcgcaccgcttcggcccctcgccgccgcacatggcgccgccgccgccgccgccgtacccctcgtggtccaaccaccaccacctcccgcccggcggtcccgcgcccatggtggcggcgaggtactacggcccggcgccgccaggctccgtctcgcacccgatcaacggcagcccggtggtgccggccgccgctgcgctgtggcgtgtccccgccgccgccatcgccgtggcggcggccgccgcgccgctggcgcgccaagaacggcagccgccgctgtcgctggccggtggacgcgaggaggaggacgcaatggtggaggtaaggagagggaacggggtaggcggcgccgccgccgcggtggtgcaactgcaacccggctcgcggctgtcgcggtcgtcgtcctcgtcgtcgtcggcgtcgtcgtcttcgcagcatcaccacgagcgccgccgcctgggagacctggcagagattaaccgggagaatgtgagcttggatctcaccttgtaa</cdnaseq>

Protein Sequence

<aaseq>MSEHDAKHVGDVPAAAGIESFSQLPFVRPRPAAMAGSSPASSIR LFGFELPPDGVVSAAGLGGGGGGGGRKFECHYCCRNFPTSQALGGHQNAHKRERQHAK RAQFQSAMAMHAHYPAYPAYASYYGSHRFGPSPPHMAPPPPPPYPSWSNHHHLPPGGP APMVAARYYGPAPPGSVSHPINGSPVVPAAAALWRVPAAAIAVAAAAAPLARQERQPP LSLAGGREEEDAMVEVRRGNGVGGAAAAVVQLQPGSRLSRSSSSSSSASSSSQHHHER RRLGDLAEINRENVSLDLTL</aaseq>

Gene Sequence

<dnaseqindica>129..303#373..1088#acacatggccatcagatcaccttgaacctacctagctagcgagctaatctcctgtagttcagtagctatctagctagcttgccctagctaccttgccggcgagctaggcggtggccggctggccggcgatgagcgagcacgacgcgaaacacgtcggagacgtgccggcggccgcgggcatcgagtcgttctcgcagctgccgttcgtgcgcccgaggccggcggcgatggccggctccagccccgcgtcgtccatccggctgttcgggttcgagctcccgcccgacggcgtcgtctccgccgccagcagcgacgtcgtcaccgccgcgagcaccaccgccgccgccgctgctctcgggcaggtgaccgcgtccggattaggaggcggcggcggcggcggcgggcgcaagttcgagtgccactactgctgccgaaacttcccgacgtcgcaggcgctgggcgggcaccagaacgcgcacaagcgggagcggcagcacgcgaagcgcgcgcagttccagagcgccatggccatgcacgcgcactacccggcctaccctgcctacgccagctactacggctcgcaccgcttcggcccctcgccgccgcacatggcgccgccgccgccgccgccgtacccctcgtggtccaaccaccaccacctcccgcccggcggtcccgcgcccatggtggcggcgaggtactacggcccggcgccgccaggctccgtctcgcacccgatcaacggcagcccggtggtgccggccgccgctgcgctgtggcgtgtccccgccgccgccatcgccgtggcggcggccgccgcgccgctggcgcgccaagaacggcagccgccgctgtcgctggccggtggacgcgaggaggaggacgcaatggtggaggtaaggagagggaacggggtaggcggcgccgccgccgcggtggtgcaactgcaacccggctcgcggctgtcgcggtcgtcgtcctcgtcgtcgtcggcgtcgtcgtcttcgcagcatcaccacgagcgccgccgcctgggagacctggcagagattaaccgggagaatgtgagcttggatctcaccttgtaattctccatgagaattgagagatgcgtgcgcgattaattagcgggttcttgccttcttggtaagtgcgaattaagagaaaaaaataattctttttctttagttcgtgaattcgtttagctagagatgctcacaagagagggattttctttttcttcagtgccttttttgcagtcctttttcgccgctgcactcattcaatattccaacctcgttctgtaacttgtaacttctgttcatcacattagatttctttgttagaaatagagataaattcaaggacaagacgtatggagcatgaaagattgtggtctcataattaattactatctccctaattttctact</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0445500, RefSeq:Os09g0445500