Os09g0445700

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0445700| Description = AAA ATPase domain containing protein| Version = NM_001069840.1 GI:115479422 GeneID:4347199| Length = 2365 bp| Defin...")
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Gene Name

Os09g0445700

Description

AAA ATPase domain containing protein

Version

NM_001069840.1 GI:115479422 GeneID:4347199

Length

2365 bp

Definition

Oryza sativa Japonica Group Os09g0445700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17275723..17278087

Sequence Coding Region

17275723..17277216,17277308..17277430,17277734..17278087

Expression

GEO Profiles:Os09g0445700

Genome Context

<gbrowseImage1> name=NC_008402:17275723..17278087 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17275723..17278087 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagttcttgtcgcagatgtggtcgctgctgggcctcctcaccatcctgcagaacgtgctcccgacgcagctactctccctcctccactcgctgtggcagtcgctgcaggactcgctcacgccgtactcctacttcgacgtgccggagttcctcggctccgccgccgtcgagcccaacgcgttgtaccgccatgtccagctctacctccaccgctcactcctcctctcctcgccgccgcctccccgcctcacgctgtcgctgccgcgctccgtcgccgtctccggcggcggaggtgggcatgacgcgggagcggcagcggcggcggcgacgccgtccgtgtcgctctccccgaaccactcggtggctgacagcttcgacgggcaccgcgccgtgtggacgcaccacgccgacacgctccaggactcgctcgaggagcggcggtcgttctcgctgcggctgcccaagcggcacgccgcggcggtgctcccggcgtacctggcgcacctcgccgccgcggcggaccacctggagcggtcgtcgcgcgcgcggaggctgcacacgaacgcggcatccccgcgcggcgccgcggcgtggtcgtcggtgccgttctgccacccgtccacgttcgacacgctcgcgctcgacccggagctcaaggcgcgcctcctcgccgacctcacggcattcgccgacggcagcgagttctaccgccggacggggcggccgtggaagcgcgggtacctcctccacggcccgcccggctctggcaagtcctcgctcatcgccgccatggcgaaccacctccggtacgacgtgttcgacctcgagctcacccgcgtcgccaccaacgccgacctccgcgcgctcctcatccagaccaccaaccgctcgctcatcgtcatcgaggacatcgactgctccctccacctcaccggcgaccgcaagagcagacggaacaaaagacgccggctcctccacgccaccgccgcctccgacgacgactcgtcggactccgactccgacggcggcgacaaccaccgctccaaggtgacgctgtccgggctgctcaacttcaccgacggcctgtggtcgtgctgcggcgaggagcgcatcatcgtgttcacgacgaaccacgtcgacggcatcgacccggcgctgctccgcccggggaggatggacgtgcacgtgcgcctgggcgcctgcggcgcgcacgccatgcgcgagctggtcggccgctacgtcggcgtcgaggaccacgagatgctggacgcggcggagtgctgcgtccgcggcggcgccgagatgacgccggccgaggtgggagaagtgctgctgcggagcagggacgacccggacgccgcggtgacggagctcgccgtggagctcaaggcgaggcagagcgcggcggccgacgagctccagtgggaggactcggcggcggagctctccgacgagtcgccgaggaagaaagggttagggtgggagggcaaggtcaggtctccgtcaaagtttgacctaatgttcaaatctcaagattgtgttctgttaggaatcgagtgggctgccaatgggcctgtacaaccattcattcaagctggcccaagcaaacccaagccgctgatccatgggatttcaagcatggaggcaatggggaagtaccgctgcggcgtcccgtgcagttggtcattggatttgggcaaggctactgctcatggcaccaacgcccacaacctgttcggtgaaatgtcaagccaaggagaggtgtcccaagaagatctcaagatatctaaggccgtccccatcaattcccccatgaacaaagaggagaaaatgatggatgaagctctggatcagatattggagaagcttgaacaaatgaagaccaagcgtaggtgcaatgagaagattgatcagattttggagaagttggacgagatagaagctaataggcgctatagttggccataa</cdnaseq>

Protein Sequence

<aaseq>MEFLSQMWSLLGLLTILQNVLPTQLLSLLHSLWQSLQDSLTPYS YFDVPEFLGSAAVEPNALYRHVQLYLHRSLLLSSPPPPRLTLSLPRSVAVSGGGGGHD AGAAAAAATPSVSLSPNHSVADSFDGHRAVWTHHADTLQDSLEERRSFSLRLPKRHAA AVLPAYLAHLAAAADHLERSSRARRLHTNAASPRGAAAWSSVPFCHPSTFDTLALDPE LKARLLADLTAFADGSEFYRRTGRPWKRGYLLHGPPGSGKSSLIAAMANHLRYDVFDL ELTRVATNADLRALLIQTTNRSLIVIEDIDCSLHLTGDRKSRRNKRRRLLHATAASDD DSSDSDSDGGDNHRSKVTLSGLLNFTDGLWSCCGEERIIVFTTNHVDGIDPALLRPGR MDVHVRLGACGAHAMRELVGRYVGVEDHEMLDAAECCVRGGAEMTPAEVGEVLLRSRD DPDAAVTELAVELKARQSAAADELQWEDSAAELSDESPRKKGLGWEGKVRSPSKFDLM FKSQDCVLLGIEWAANGPVQPFIQAGPSKPKPLIHGISSMEAMGKYRCGVPCSWSLDL GKATAHGTNAHNLFGEMSSQGEVSQEDLKISKAVPINSPMNKEEKMMDEALDQILEKL EQMKTKRRCNEKIDQILEKLDEIEANRRYSWP</aaseq>

Gene Sequence

<dnaseqindica>1..1494#1586..1708#2012..2365#atggagttcttgtcgcagatgtggtcgctgctgggcctcctcaccatcctgcagaacgtgctcccgacgcagctactctccctcctccactcgctgtggcagtcgctgcaggactcgctcacgccgtactcctacttcgacgtgccggagttcctcggctccgccgccgtcgagcccaacgcgttgtaccgccatgtccagctctacctccaccgctcactcctcctctcctcgccgccgcctccccgcctcacgctgtcgctgccgcgctccgtcgccgtctccggcggcggaggtgggcatgacgcgggagcggcagcggcggcggcgacgccgtccgtgtcgctctccccgaaccactcggtggctgacagcttcgacgggcaccgcgccgtgtggacgcaccacgccgacacgctccaggactcgctcgaggagcggcggtcgttctcgctgcggctgcccaagcggcacgccgcggcggtgctcccggcgtacctggcgcacctcgccgccgcggcggaccacctggagcggtcgtcgcgcgcgcggaggctgcacacgaacgcggcatccccgcgcggcgccgcggcgtggtcgtcggtgccgttctgccacccgtccacgttcgacacgctcgcgctcgacccggagctcaaggcgcgcctcctcgccgacctcacggcattcgccgacggcagcgagttctaccgccggacggggcggccgtggaagcgcgggtacctcctccacggcccgcccggctctggcaagtcctcgctcatcgccgccatggcgaaccacctccggtacgacgtgttcgacctcgagctcacccgcgtcgccaccaacgccgacctccgcgcgctcctcatccagaccaccaaccgctcgctcatcgtcatcgaggacatcgactgctccctccacctcaccggcgaccgcaagagcagacggaacaaaagacgccggctcctccacgccaccgccgcctccgacgacgactcgtcggactccgactccgacggcggcgacaaccaccgctccaaggtgacgctgtccgggctgctcaacttcaccgacggcctgtggtcgtgctgcggcgaggagcgcatcatcgtgttcacgacgaaccacgtcgacggcatcgacccggcgctgctccgcccggggaggatggacgtgcacgtgcgcctgggcgcctgcggcgcgcacgccatgcgcgagctggtcggccgctacgtcggcgtcgaggaccacgagatgctggacgcggcggagtgctgcgtccgcggcggcgccgagatgacgccggccgaggtgggagaagtgctgctgcggagcagggacgacccggacgccgcggtgacggagctcgccgtggagctcaaggcgaggcagagcgcggcggccgacgagctccagtgggaggactcggcggcggagctctccgacgagtcgccgaggaagaaagggttagggtgggagggcaaggttaggattctgggccggcttaggagcttgaccaagtcggagtccggacgccgaggcgtttagtttgacttttgttgacttgatgttttaggtcaggtctccgtcaaagtttgacctaatgttcaaatctcaagattgtgttctgttaggaatcgagtgggctgccaatgggcctgtacaaccattcattcaagctggcccaagcaaacccaaggtaaagaacaaaagcaacagcatcggttctttcaggggaggaaaaacacagaaaggggcaggacggcgaccagcctgagcggcttggcgatcggcggcagcggcggcggcttggatccgggctagatcctcgtcgagtatctattccctcctccacctcccatttccctagcttctagaaccttccagaacccctgtatttcctcgtcttccacctccaaaaacagcactgttgactggatagttgttcgtggtgaaattcttgttgtttggtgatttggttgctaacaatatggtatcagagccgctgatccatgggatttcaagcatggaggcaatggggaagtaccgctgcggcgtcccgtgcagttggtcattggatttgggcaaggctactgctcatggcaccaacgcccacaacctgttcggtgaaatgtcaagccaaggagaggtgtcccaagaagatctcaagatatctaaggccgtccccatcaattcccccatgaacaaagaggagaaaatgatggatgaagctctggatcagatattggagaagcttgaacaaatgaagaccaagcgtaggtgcaatgagaagattgatcagattttggagaagttggacgagatagaagctaataggcgctatagttggccataa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0445700, RefSeq:Os09g0445700