Os09g0446200

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0446200| Description = Spc97/Spc98 family protein| Version = NM_001069843.2 GI:297609549 GeneID:4347202| Length = 1926 bp| Definition = Or...")
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Gene Name

Os09g0446200

Description

Spc97/Spc98 family protein

Version

NM_001069843.2 GI:297609549 GeneID:4347202

Length

1926 bp

Definition

Oryza sativa Japonica Group Os09g0446200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17287931..17289856

Sequence Coding Region

17287932..17289298,17289389..17289656

Expression

GEO Profiles:Os09g0446200

Genome Context

<gbrowseImage1> name=NC_008402:17287931..17289856 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17287931..17289856 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gattcaggggtgtctggtaattacctctctctgcggcgtcttgcagtttggctagctgagcctgcggtgaggatgcgcctaatggcggttttggttgatggatgccggggtttgagaggtggcgcaatggctggtgcgatccatgggcacgcacagcatggggatcccaccttccaggattttatgggccgcttgctgcggcgggtgtgctcaccgctgtttgaaatggtccgaagctgggtgttagaaggggagttggaggatgtgtttgcagaattcttcattgttgggcagccagtcaaggctgagtctctgtggcaggagggctatcttcttcagtctgatatgcttccagctttcatttctccagtactggcgcaaaggattcttagaaccgggaagtcaatcaactttcttaaagtttgctgtgatgataatggttgggcagatgctgctactgaggctgctgtctgtgttggcaccacaactagtcgaggtgggcttggttatgggcagattgatgctttggaggcactagtggttgaagcagccaagaggattgatcggcatttgatggatgtgatccataagcggtatcgattcaaagatcattgtcttgcgattaagaggtatttgcttcttgggcagggtgacttcgtccagtatctgatggatgttgttggccctgagttgtcagagccagcaaataggattagctccttccatttggctgggttgcttgagactgcgatccgagcatctaacgctcaatatgatgaccgtgacatcttggatcgcataaaggtaaagatgatggatcatggagatggtgatcgtggctgggatgtgttttccttggagtatgatgctagggttcctctggatacggtattcacagcttctgtcatgaagaggtacctcaagatttttaacttcctgtggaagcttaagcgtgtagaccattcattgactggaatctggaagacaatgaagcctaactgcattgtttcatctccattttacaaggagggaacaaacatcaggtctcagtttgtttcagttcttcgcaaatgccaagttctatttaatgaaatgaaccactttgtgaccaacttccagtactacattatgtttgaggtcctggaagtttcctgggctcgtttctcagaagaaatggattcagcaaaggatttagatgatcttctgttggcacatgataagtatctcacatcgattgtggagaagtctctccttggtgagagatcacatggaattctgaggaatctttttgcactttttgacatcattttgcaattccggagccatgctgatcggtggtttgagcggatatatgagttgcaactgaggggaaagggtaagccaaaatcaaaagcaaaagctaaatccaaggaagtggattcatgggtggatggtgggaggaaagccatgattcagctggctggggaacttttccggaaaatgggtgaagatttggatagcatcgcgaaagattatacttcttcacttgatgcatttatcgctcagttacctatgcaacagcatgttgatttgaaattcctactcttccgcttagacttcactgaatactacagtcgtgtttcgtctaacaaatga</cdnaseq>

Protein Sequence

<aaseq>DSGVSGNYLSLRRLAVWLAEPAVRMRLMAVLVDGCRGLRGGAMA GAIHGHAQHGDPTFQDFMGRLLRRVCSPLFEMVRSWVLEGELEDVFAEFFIVGQPVKA ESLWQEGYLLQSDMLPAFISPVLAQRILRTGKSINFLKVCCDDNGWADAATEAAVCVG TTTSRGGLGYGQIDALEALVVEAAKRIDRHLMDVIHKRYRFKDHCLAIKRYLLLGQGD FVQYLMDVVGPELSEPANRISSFHLAGLLETAIRASNAQYDDRDILDRIKVKMMDHGD GDRGWDVFSLEYDARVPLDTVFTASVMKRYLKIFNFLWKLKRVDHSLTGIWKTMKPNC IVSSPFYKEGTNIRSQFVSVLRKCQVLFNEMNHFVTNFQYYIMFEVLEVSWARFSEEM DSAKDLDDLLLAHDKYLTSIVEKSLLGERSHGILRNLFALFDIILQFRSHADRWFERI YELQLRGKGKPKSKAKAKSKEVDSWVDGGRKAMIQLAGELFRKMGEDLDSIAKDYTSS LDAFIAQLPMQQHVDLKFLLFRLDFTEYYSRVSSNK</aaseq>

Gene Sequence

<dnaseqindica>2..1368#1459..1726#tgattcaggggtgtctggtaattacctctctctgcggcgtcttgcagtttggctagctgagcctgcggtgaggatgcgcctaatggcggttttggttgatggatgccggggtttgagaggtggcgcaatggctggtgcgatccatgggcacgcacagcatggggatcccaccttccaggattttatgggccgcttgctgcggcgggtgtgctcaccgctgtttgaaatggtccgaagctgggtgttagaaggggagttggaggatgtgtttgcagaattcttcattgttgggcagccagtcaaggctgagtctctgtggcaggagggctatcttcttcagtctgatatgcttccagctttcatttctccagtactggcgcaaaggattcttagaaccgggaagtcaatcaactttcttaaagtttgctgtgatgataatggttgggcagatgctgctactgaggctgctgtctgtgttggcaccacaactagtcgaggtgggcttggttatgggcagattgatgctttggaggcactagtggttgaagcagccaagaggattgatcggcatttgatggatgtgatccataagcggtatcgattcaaagatcattgtcttgcgattaagaggtatttgcttcttgggcagggtgacttcgtccagtatctgatggatgttgttggccctgagttgtcagagccagcaaataggattagctccttccatttggctgggttgcttgagactgcgatccgagcatctaacgctcaatatgatgaccgtgacatcttggatcgcataaaggtaaagatgatggatcatggagatggtgatcgtggctgggatgtgttttccttggagtatgatgctagggttcctctggatacggtattcacagcttctgtcatgaagaggtacctcaagatttttaacttcctgtggaagcttaagcgtgtagaccattcattgactggaatctggaagacaatgaagcctaactgcattgtttcatctccattttacaaggagggaacaaacatcaggtctcagtttgtttcagttcttcgcaaatgccaagttctatttaatgaaatgaaccactttgtgaccaacttccagtactacattatgtttgaggtcctggaagtttcctgggctcgtttctcagaagaaatggattcagcaaaggatttagatgatcttctgttggcacatgataagtatctcacatcgattgtggagaagtctctccttggtgagagatcacatggaattctgaggaatctttttgcactttttgacatcattttgcaattccggagccatgctgatcggtggtttgagcggatatatgagttgcaactgaggttagattgttgcataattaaccaatgccatctctctccatcttattacatatatgctgtttgatttacctcttcttttttttactgcaggggaaagggtaagccaaaatcaaaagcaaaagctaaatccaaggaagtggattcatgggtggatggtgggaggaaagccatgattcagctggctggggaacttttccggaaaatgggtgaagatttggatagcatcgcgaaagattatacttcttcacttgatgcatttatcgctcagttacctatgcaacagcatgttgatttgaaattcctactcttccgcttagacttcactgaatactacagtcgtgtttcgtctaacaaatgaagatgtgttcctgatgtggaaaaagtagggagttagatttactctttggtttggggtttgtgaggcattcttttgtacaccttagccctgctgattgatatttggtcatttgaaaggcatggtctgccactttcatttgtcctgaacctcctgttgaattcaccctttaaggtaacttctagggccaatacaactatcct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0446200, RefSeq:Os09g0446200