Os09g0446800

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0446800| Description = Similar to Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (10-formyletrahydrofolate...")
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Gene Name

Os09g0446800

Description

Similar to Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (10-formyletrahydrofolate synthetase) (FHS) (FTHFS)

Version

NM_001069845.1 GI:115479432 GeneID:4347204

Length

3805 bp

Definition

Oryza sativa Japonica Group Os09g0446800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17308527..17312331

Sequence Coding Region

17308545..17308919,17309014..17309163,17309881..17311056,17311482..17311628,17311839..17312114

Expression

GEO Profiles:Os09g0446800

Genome Context

<gbrowseImage1> name=NC_008402:17308527..17312331 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17308527..17312331 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgtgtctgtcccaccaaccaattatccgaaatctttatcctcgattatcaaatgccatcgtcgtcgtgcggcaataaacaattgccattcagtcgtctcgcatccgccgctctcgcactcgaaccaccaccaccgctcgctgcgtgtgagatccagcgccgccgtcgcgccgccgctgccgccgccgctggtggtgccgatgacgacgccgaagccgagcccgacgatccggaggctggacgtggcgtcgccggtgccggcggacatcgacatcgccaacgccgtctcgccgctccccatcgccgacatcgccgcggagctcggcctgcgccccgagcacttcgatctctacggcaagtacaaggccaaggtgttgctgtctgttcttgatgagttgaaagggcagcaggatgggtactacgtggtggtcggcggcatcacgccgacgccgctcggggagggcaagtcgaccaccaccgttgggctgtgccaggcgctgggtgcgtttcttgataaaaaggttgtcacttgcctccgtcaaccatcacaagggcctacttttggaatcaaggggggtgctgctggaggtggctacagccaagtcatacccatggatgagttcaatcttcatcttacaggagatatccatgcaattacagctgcaaacaatcttcttgctgctgctatcgatacaaggattttccatgaggcttcacaatcagacaaagcgctgttcaatagactatgtccgccaaacaaagaaggaaagaggcgctttgctgatgtaatgctcagacgcctgataaagcttggaatctcaaagacagatcctaatgagcttactccagatgaagttagacgctttgcaagacttgacatagaccctgaatccattacttggagacgggtcatggatgtaaatgaccggttcctgagaaaaatcactattggacaaggccctgatgaaaaaggtatggtgagagaaacaggctttgacatagctgtagctagtgagataatggccgtattagctcttacaacttcccttgctgacatgagggaaaggcttggaagaatggtgatagggaacagcaaggcaggtgagcctattactgctgatgatcttggtgttgggggtgccttgactgtcctaatgaaagatgccatccatccaacgctcatgcaaactcttgaaggcactcctgtgttagtgcacgctggaccttttgctaatattgctcatggaaactcttcgatagttgctgataaaattgcactgaagttggttgggaagggtggatatgtagttacagaggcaggttttggttctgatattggaactgagaaattcatggatataaagtgtagatatagtggattaatgcctcagtgtgctattattgtggccacaattagagctcttaaaatgcatggtgggggccctgatgttgtggctgggaagcctttggatcatgcatatgtgagtgaaaatgtggctcttgttgaagctggatgcgtcaatcttgctaaacatatcgcaaacacaaagagttatggagttaatgttgtagttgcaatcaacaagtttgcatcagatactgaagcagaaatggacgtggtgcgaaatgcgtctttggctgctggtgcttttgatgctgttgtctgcactcaccatgcgcatggtggtaaaggagcggttgatcttggactcgcggttcaacgggcatgtgagagccaggcagaccctctgaaatttttgtatcctttagaatctggcataaaggagaagattgagtcaatagctaagttctatggtgctagcggcgttgaatactctgaacaggcggagaagcagattgaaatgtataccaagcaaggcttctcaaacctcccaatatgcatggcgaaaactcagtactcgttttcgcatgttccatccatgaagggcgcgccgtctggcttcgtgcttcctatcagggatgtgagggccagcattggagccggtttcatctacccactggttggcaccatgagcacaatgcctggtcttcctacaaggccctgcttctacgaaatcgacgtcgacacagccactggcaaagtcatgggtctgtcataa</cdnaseq>

Protein Sequence

<aaseq>MDVSVPPTNYPKSLSSIIKCHRRRAAINNCHSVVSHPPLSHSNH HHRSLRVRSSAAVAPPLPPPLVVPMTTPKPSPTIRRLDVASPVPADIDIANAVSPLPI ADIAAELGLRPEHFDLYGKYKAKVLLSVLDELKGQQDGYYVVVGGITPTPLGEGKSTT TVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIH AITAANNLLAAAIDTRIFHEASQSDKALFNRLCPPNKEGKRRFADVMLRRLIKLGISK TDPNELTPDEVRRFARLDIDPESITWRRVMDVNDRFLRKITIGQGPDEKGMVRETGFD IAVASEIMAVLALTTSLADMRERLGRMVIGNSKAGEPITADDLGVGGALTVLMKDAIH PTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGKGGYVVTEAGFGSDIGTE KFMDIKCRYSGLMPQCAIIVATIRALKMHGGGPDVVAGKPLDHAYVSENVALVEAGCV NLAKHIANTKSYGVNVVVAINKFASDTEAEMDVVRNASLAAGAFDAVVCTHHAHGGKG AVDLGLAVQRACESQADPLKFLYPLESGIKEKIESIAKFYGASGVEYSEQAEKQIEMY TKQGFSNLPICMAKTQYSFSHVPSMKGAPSGFVLPIRDVRASIGAGFIYPLVGTMSTM PGLPTRPCFYEIDVDTATGKVMGLS</aaseq>

Gene Sequence

<dnaseqindica>19..393#488..637#1355..2530#2956..3102#3313..3588#gggggaggtgtttgcgtcatggatgtgtctgtcccaccaaccaattatccgaaatctttatcctcgattatcaaatgccatcgtcgtcgtgcggcaataaacaattgccattcagtcgtctcgcatccgccgctctcgcactcgaaccaccaccaccgctcgctgcgtgtgagatccagcgccgccgtcgcgccgccgctgccgccgccgctggtggtgccgatgacgacgccgaagccgagcccgacgatccggaggctggacgtggcgtcgccggtgccggcggacatcgacatcgccaacgccgtctcgccgctccccatcgccgacatcgccgcggagctcggcctgcgccccgagcacttcgatctctacggcaagtacaaggccaaggtgcgtgcgccgcttccaaagatgcggattgggttgtcgcgcgatgcgatgcgatttgttgatgattttttttttcgcttgttcttttttgcaggtgttgctgtctgttcttgatgagttgaaagggcagcaggatgggtactacgtggtggtcggcggcatcacgccgacgccgctcggggagggcaagtcgaccaccaccgttgggctgtgccaggcgctgggtgcgtttcttgataaaaaggtgagaggctttccatgccactttcgcttgttctataatcgacagggtatcttggttacttattggttatagataaagtttgtgattggtgttgaggtaaacaatcagtttgcttggcacaatagtatcagcctgtgagctttgttgattagatttaagtctttttatgctgtcgtagtagcacactagcacctgtatattggatgcaggcactgtcctttttaaattctgcagtggtctagtggaatcaagaattctgtcagtttggtttgatttatttgtcaaacttattaatatcaaatcttcattggtgcattgtcagaactccatggtagaactgaactctctgtgtttatttatatttgcctgcaagagtcatgttgataaattctctctcaccaagcaattttcaggaaaaacaaaatcctaatgtttaaatacttgatacaatgctctgttctgggggtctgggatgactttatttgtttcttgtaacagtcatgatagactgcatggttctttatatgtctctaaccatcatgaacgtagtataagtggcgaatgttgatactgatacatagagtatattatgcattccagagcatattgaaacgattgacatatcgatgtacatattatgtttatttttttatagagtatatattatgttattgatatgctttactactttactcaatattaatgttgctattataggttgtcacttgcctccgtcaaccatcacaagggcctacttttggaatcaaggggggtgctgctggaggtggctacagccaagtcatacccatggatgagttcaatcttcatcttacaggagatatccatgcaattacagctgcaaacaatcttcttgctgctgctatcgatacaaggattttccatgaggcttcacaatcagacaaagcgctgttcaatagactatgtccgccaaacaaagaaggaaagaggcgctttgctgatgtaatgctcagacgcctgataaagcttggaatctcaaagacagatcctaatgagcttactccagatgaagttagacgctttgcaagacttgacatagaccctgaatccattacttggagacgggtcatggatgtaaatgaccggttcctgagaaaaatcactattggacaaggccctgatgaaaaaggtatggtgagagaaacaggctttgacatagctgtagctagtgagataatggccgtattagctcttacaacttcccttgctgacatgagggaaaggcttggaagaatggtgatagggaacagcaaggcaggtgagcctattactgctgatgatcttggtgttgggggtgccttgactgtcctaatgaaagatgccatccatccaacgctcatgcaaactcttgaaggcactcctgtgttagtgcacgctggaccttttgctaatattgctcatggaaactcttcgatagttgctgataaaattgcactgaagttggttgggaagggtggatatgtagttacagaggcaggttttggttctgatattggaactgagaaattcatggatataaagtgtagatatagtggattaatgcctcagtgtgctattattgtggccacaattagagctcttaaaatgcatggtgggggccctgatgttgtggctgggaagcctttggatcatgcatatgtgagtgaaaatgtggctcttgttgaagctggatgcgtcaatcttgctaaacatatcgcaaacacaaagagttatggagttaatgttgtagttgcaatcaacaagtttgcatcagatactgaagcagaaatggacgtggtgcgaaatgcgtctttggctgctggtgcttttgatgctgttgtctgcactcaccatgcgcatggtggtaaaggagcggttagttttctgtcattgcattaattattaatccagtcatgtctatacatcttgacctattttttaactaaatcttccactctttatgggcaatgtttgattgtgaatcagtaaattgtgttctggtacttatgttttacctaattatgtttacaaactttgtgactttgctctttcatgcctagcaaaaatttgcctcaaaataattgtgctcctggcaggttttccagtttgcttaagttataaactgtggacagtgttatgatatgtgacgcccatgcatctcttattttatttctccattattgtctagcatattgttttaatgggaattctgtgcttatttcttccatctacgaagagtgtgaaggttgaaatcgtcagcattaaactgatgtctgttctaccatttaacttgttttcaggttgatcttggactcgcggttcaacgggcatgtgagagccaggcagaccctctgaaatttttgtatcctttagaatctggcataaaggagaagattgagtcaatagctaagttctatggtgctagcggcgttgaatactctgaacaggtatccttgctactacctcctattctgattactgtgtttgagattgtatctactatctttctcccatgcctttcatttcacactgaaagaggaatcccctgatgttcatgcttttgacactgatgaacatgctgtgggaatggcattagacagatacactgaacacataacattctgctttattctgctgactgactgacttccgtgcaggcggagaagcagattgaaatgtataccaagcaaggcttctcaaacctcccaatatgcatggcgaaaactcagtactcgttttcgcatgttccatccatgaagggcgcgccgtctggcttcgtgcttcctatcagggatgtgagggccagcattggagccggtttcatctacccactggttggcaccatgagcacaatgcctggtcttcctacaaggccctgcttctacgaaatcgacgtcgacacagccactggcaaagtcatgggtctgtcataagcgtttctggaatggattgcaatttggggcacaattgtgtagttgcaaattttgggacattcccttagctgaataatagcctcagtggcttcctgcaagtgcagcaatacatttttctttttgagtttcttggtgactgtaaatcagtaaatgtggtcgaaccatactgttcagactctgttccaatgccccatgtttcagcttaacatgctttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0446800, RefSeq:Os09g0446800