Os09g0448500

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0448500| Description = Conserved hypothetical protein| Version = NM_001188934.1 GI:297726998 GeneID:9266552| Length = 1781 bp| Definition ...")
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Gene Name

Os09g0448500

Description

Conserved hypothetical protein

Version

NM_001188934.1 GI:297726998 GeneID:9266552

Length

1781 bp

Definition

Oryza sativa Japonica Group Os09g0448500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17419698..17421478

Sequence Coding Region

17419698..17420093,17420180..17420318,17420895..17421478

Expression

GEO Profiles:Os09g0448500

Genome Context

<gbrowseImage1> name=NC_008402:17419698..17421478 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17419698..17421478 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcagcagcccaagaaagggagctgcagctgctgcagctgcagggagtgtcctggcctttccacgcgatggaggcagcgagaagcagcagctgggacgccaccaccagcagcggcagcagcagcggcgccagcggcggcggcggcggcgattgcttcctgctcggttgggagccgccgttcgccgccggctgcctcggcgtcctcgccgccgacgtccacggcctcttcccactctgtacgtgccctgctcgctttctttacctatgttcaagccttcgaattggtgaattaatccgtgcaccggcttggagtgcagacatggagtcgccgccggcgccgccgcagcaggacgcggtggcattgccggaggagctcgacgaccttctcctgaatttctgggacgcaagcagcgaccagcagcaacaacaacaacaggtcgccttcaattccagctgcatcctgcaggagaagacgagcagcaccactgccactgcaaccaccaccaactccaactccaacttcttctacgacgacgatgatctcctgggctcgattttctcgacgggtcccacattgccagagaaaggcgtggcagagccactactcagcagctcatcctccaactgccaggcggacccacaggtcagtgaggttagtggggcccagccgcaggccactccggccgcgccaggtgtcgcgcgggccccacctcgctgctcctcctcctcgtcgctgaagcgcgccgcgccggcggaggacgcggcggcggaggcggagtactgcagacagagcagcagcaagcggcgaagggaggcggagacgccgacgccggagaagtcggcggcggcggcggcggcgccggcgtgcagggtgctgcgcccgttcgcggtgctgaagccggacgggctggacggcggcgcgacgctggcggacatcaacgcgcggatcctgatgcggccgtcgcggccggtgcgccaccccgtcggcgagttcgcgtgcgcgccgcgcgtgtcggcggacaagccggggctctccggcaaggccgtcgccggcttcaccaggctgcacaccccgggacgcggcaccatcaccatcatacgaaccagaggctag</cdnaseq>

Protein Sequence

<aaseq>MEAAAQERELQLLQLQGVSWPFHAMEAARSSSWDATTSSGSSSG ASGGGGGDCFLLGWEPPFAAGCLGVLAADVHGLFPLCTCPARFLYLCSSLRIGELIRA PAWSADMESPPAPPQQDAVALPEELDDLLLNFWDASSDQQQQQQQVAFNSSCILQEKT SSTTATATTTNSNSNFFYDDDDLLGSIFSTGPTLPEKGVAEPLLSSSSSNCQADPQVS EVSGAQPQATPAAPGVARAPPRCSSSSSLKRAAPAEDAAAEAEYCRQSSSKRRREAET PTPEKSAAAAAAPACRVLRPFAVLKPDGLDGGATLADINARILMRPSRPVRHPVGEFA CAPRVSADKPGLSGKAVAGFTRLHTPGRGTITIIRTRG</aaseq>

Gene Sequence

<dnaseqindica>1..396#483..621#1198..1781#atggaggcagcagcccaagaaagggagctgcagctgctgcagctgcagggagtgtcctggcctttccacgcgatggaggcagcgagaagcagcagctgggacgccaccaccagcagcggcagcagcagcggcgccagcggcggcggcggcggcgattgcttcctgctcggttgggagccgccgttcgccgccggctgcctcggcgtcctcgccgccgacgtccacggcctcttcccactctgtacgtgccctgctcgctttctttacctatgttcaagccttcgaattggtgaattaatccgtgcaccggcttggagtgcagacatggagtcgccgccggcgccgccgcagcaggacgcggtggcattgccggaggagctcgacgaccttctcctggtagtaatctcgcacgagacaagagcaaaggcaacagtttcttgcagattttcgtgagggcctacgctaatctgcttctcctgcagaatttctgggacgcaagcagcgaccagcagcaacaacaacaacaggtcgccttcaattccagctgcatcctgcaggagaagacgagcagcaccactgccactgcaaccaccaccaactccaactccaacttcttctacggtgagaagaagagtttgaaattaaaatcttttacgccttttttcgcctacaaaaccaccagcttttgccacgacacgcgcagagcagcagcaatcctctgcgttttttaggtcctccatgacctcgcaccaccaaaggacagaacacgaagtcgtatagtaatattttttgtgtcatcaaattgtgattctgtcaatggcgatgggacccgcggggaagattagcagcacgtagttgttgtcacgacccccatgatttgtgcatgatcgatgcatcattagattatagtagtgtatagaatagtgatgagttatgagtatatagtattatagcagaggatgcatttgatggcatgatgcgtctgaccttgttaggaactgtcagtggcgcttcttttcaagtaaagacagatctgggttttacgtggttagacactacccagattctgctaatcttcttcgttactgctcttgttaacgttgagcctttacgtgattagtagtaggtgattagtttactatacttgagtaggagtagattattaataagtggtgtcttgtcatcttttgcttgcagacgacgatgatctcctgggctcgattttctcgacgggtcccacattgccagagaaaggcgtggcagagccactactcagcagctcatcctccaactgccaggcggacccacaggtcagtgaggttagtggggcccagccgcaggccactccggccgcgccaggtgtcgcgcgggccccacctcgctgctcctcctcctcgtcgctgaagcgcgccgcgccggcggaggacgcggcggcggaggcggagtactgcagacagagcagcagcaagcggcgaagggaggcggagacgccgacgccggagaagtcggcggcggcggcggcggcgccggcgtgcagggtgctgcgcccgttcgcggtgctgaagccggacgggctggacggcggcgcgacgctggcggacatcaacgcgcggatcctgatgcggccgtcgcggccggtgcgccaccccgtcggcgagttcgcgtgcgcgccgcgcgtgtcggcggacaagccggggctctccggcaaggccgtcgccggcttcaccaggctgcacaccccgggacgcggcaccatcaccatcatacgaaccagaggctag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0448500, RefSeq:Os09g0448500