Os09g0449600

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0449600| Description = Similar to Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase)| Version = NM_001188937.1 ...")
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Gene Name

Os09g0449600

Description

Similar to Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase)

Version

NM_001188937.1 GI:297727004 GeneID:9266421

Length

2753 bp

Definition

Oryza sativa Japonica Group Os09g0449600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17488262..17491014

Sequence Coding Region

17490402..17490432,17490534..17490603,17490778..17490819

Expression

GEO Profiles:Os09g0449600

Genome Context

<gbrowseImage1> name=NC_008402:17488262..17491014 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17488262..17491014 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gatgtggagccttgcatttcaggcccaaagagtcctcatgaccgtgtccctttgaaggaaatgaaatcagattggcatgcttgcctggacagcaatttcaagcaatatgcagttacacaaacacatcaaatcccagcgttataa</cdnaseq>

Protein Sequence

<aaseq>DVEPCISGPKSPHDRVPLKEMKSDWHACLDSNFKQYAVTQTHQI PAL</aaseq>

Gene Sequence

<dnaseqindica>2141..2171#2273..2342#2517..2558#ggataaggcaacagcaaaggaacatttacttcttcctcccgagttcccccaaactccttccttcttccgatctcccaccgtcgcctgggcgcctggcggtttgctccactccataggcggccatcgtcttctcaaccagaaagcttctggctgtacagcttggcgggatacaagacgacggtctgccgtcggcgatccgcagtcgccggagctgaaggtggaagcggccaacacggcagtccgtgcagccggtgagttctctgataattttaggtccaaactttaaatgtatgctttttctttggtaattttgggttaatttcgtgtctgcctcaacatgatttatttaattttgggttaaaattcatgtctgcctcaacaagatttggatccccttttctaaagttggtagctttggagcctttaggttgtttcttgctagcagttcctctgcaaactagttttctgtacaaaccctttcttgccggaatcaaaagaaaatttatgtggtcaaactgccgctccctgacatgccgaaccggattattttgttgaaaatcgaatcggatttaattcatactagtccgaatcggacttttaagtctgcataattcgatttgcatagcgaatactccctcatataatgactttgtgcataggtttaaacccataatcacatcctcttctcctgcagcttgagaattttttgtcatggcagtgaaaagatgcgcagaagtgccgatatctgctaggccgggaaagatgatgcggattgctattaagtcttggtcaaggttcttgcccccttacatccctgacgatgtgatcttcgacattctgttacggctgccatccaaatctcttatccgatttaagtccgtgtgtaaggcttggcacgccataatatccaacccctgtttcatcagtgctcacctcgagtgctctaagcagaagccatcgatatttatggtccctggtgtttacgagaagcagaataatggcgagaatacttccttcctgatgggcctctatcagtatcagggtggtaatataatggaacaaatccatgtacaagactttccacaaggcattggtacatggagtcgtccgatccactgcaatggcatgctcctcatttccaccatgaaccacgaaatgattgtctgcaacccatcaactagagagattgtctccctgccaaaagggagttataaccttcatgcgggcccaagggctggatttgggtttgaccctcacagcaacaagtataaggtggctagatttttctaccagagggacgatgacacatcagaattggtctgcaagtttgaagtgcttactctaggcactaatttgtggaggcaaactgaggatccgccatatccaattagtgggttaactcctgttcatgtgaaaggcgccatctactggatggttaatacgccactttgccctgatccacccaatgcatttcttaggttctgtttgactaacgagaagtttagtctgcttcagtatcctccatgtaatctaaagcctacccgtttcatagaagtggagggtgaactatgctgtgcttgcttttgcagtcaggtgagcgcgttgaagatctggacctgcaattatgcacagaaccctgaatggactcagcgctgcactgtacagattccacctgatatagttgtgaataatcctgtagcaaggcctcctatagtttttcttcatggaaaaaagctgctactgacatggaatcaggtctaccagtatgacattcaaacctgtagaatggaaaagatagcttcaggggttgaagacttcacgtgctatgatccaaggaacaataagtactgggcatatctggagaaagaagtaacggatatgcatctatttaattatgctgagagtctagttccgattagagaattttgagaagtcacttcattttttgttaaggtgagttttatcacaacttctagtgatccaagatagagctgagttgcttttcgttgtggcgagtgttgaagcatcactttaataaattggacatatgctattgtttgacggtaacaatttattgttcatttatacgcactaaccatgaaacgagtttattcttcataacttgagctcaactttacagatgtggagccttgcatttcaggcccaaagaggtatctgtcgtaattacttttttctcactggacacacaatatttctgctaatgcggaaggtgcattaattatgctgagcttttttatttatcattctgtagtcctcatgaccgtgtccctttgaaggaaatgaaatcagattggcatgcttgcctggacagcaatttcaaggtaactaaggataacctttgcattataaagtttaaaatgtagtggcattgctcatcaaaatacaccccaaaaaacacactagggttttgcagtcccaacggagtaccatgataaagttgtgaaattttactttcaaggacaacctgctgaaatcaaacagtgttgttcttgcagcaatatgcagttacacaaacacatcaaatcccagcgttataattggtgctggcctagtcgcaaagaaagcctgtgaattgggccttgaggtttgcatgttcgttcatatatgtaactagtgtattgtgtcgtgtgtttgtgcgactataacctccctctctgtaaatatgtataataattaacttaatttgttaataacatttaataatttaaattagtatttcctccttttataag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0449600, RefSeq:Os09g0449600