Os09g0458100

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Revision as of 07:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0458100| Description = Xyloglucan fucosyltransferase family protein| Version = NM_001069908.1 GI:115479558 GeneID:4347268| Length = 1943 bp...")
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Gene Name

Os09g0458100

Description

Xyloglucan fucosyltransferase family protein

Version

NM_001069908.1 GI:115479558 GeneID:4347268

Length

1943 bp

Definition

Oryza sativa Japonica Group Os09g0458100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17969219..17971161

Sequence Coding Region

17969370..17970838,17970916..17971105

Expression

GEO Profiles:Os09g0458100

Genome Context

<gbrowseImage1> name=NC_008402:17969219..17971161 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17969219..17971161 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacagtaagccgacgcggccgcaccgccggccgccgcctttgccgtccaagacgagcggcgtgtggcccgtcgcgctgctcgtcgtcctctgcttcgccgctctcccgctcttcctcgcgctgtcacgagcgcggccgaccttgtccgacgtgtcgcagatgggcgtcacggtgaccgtccacgacgaggatccagcagggacgccgccggaatcctccccggcgaaccgggacaggctcctcggcgggctgctctcgccggacatcggcgagagcgcgtgcctgagccggtacaagtcgtcgctccaccgcaagccgtcgccgcactcgccgtcgccgtacctcgtctcccggctgcgcaagtacgaggcgctccaccgcaagtgcgggcccggcacgctcttctacaagaagtccctgatgcagctcacctccgcctacagcatgggcctcgtcgagtgcacctacctcgtctggacgccgtgcggcggcagccacctcggcgaccgcatgctctccatggcgtccgccttcctctacgcgctcctcacccaccgcgtgttcgtggtgcacgtcaccgacgacatggccggactcttctgcgagcccttcccggccgcatcgtgggagctccccgcgggtttcctcgtccacaacctgacgcagctcggccgcggcagcgagcacagctacgcgaacctgctcggtgctaagaagatcaagaccgacgaccccgccggcgtgcggtccgagtcgctgccgtcgtacgcgtacgtccatctggagcacgactaccagcagtcggaccagctcttcttctgcgacgacgaccagaccgtgctggcgaaggtgaactggctgatactgcgctccaatctctacttcacgccggggctgttcctggtgccgcagttcgaggacgagctccggtggatgttcccggcgagggacacggtgttccaccatatcgggaggtacctgttccacccttccaacaaggtgtgggagctcatcacgaggtaccacacgtcgtacatggccaagtttgaagaaaatattggcattcagatcacgaccttcgccgggagcaaggtgtcgtcggaggagtacttcaagcagatcgtcgcttgcacgagtcaggagaagattctgccggagatcgacccaaacgcgacgtcgagcgctaacgaggcggcgctagccaccacggcgtcgaaggccgtgctcgtcagctcggcgcagccgtcggagtacgccgagaagctgaaggcgatgtactacgagcacgcgacggtgaccggcgagcctgtcagcgtgctgcagccggccggcgccggtaagcaggcacccaaccagaaggcgctggtggagatgttcctccagagctactgcgacgtgtcggtggtcagcgggcggtcgacggttgggtacgtcggccatggcctcgccggggtaaagccctggctgttgctaacgcccacgaatcggacagcgtcggctaacccgccctgcatccagacaacgtcgatggagccgtgcttccatgctccaccgagctatgactgcagggccaagaaggatggggaccttggtgccgttctaaggcatgtcaggcattgcgaggatgtcggtgatggtctaaaattgtatgactag</cdnaseq>

Protein Sequence

<aaseq>MDSKPTRPHRRPPPLPSKTSGVWPVALLVVLCFAALPLFLALSR ARPTLSDVSQMGVTVTVHDEDPAGTPPESSPANRDRLLGGLLSPDIGESACLSRYKSS LHRKPSPHSPSPYLVSRLRKYEALHRKCGPGTLFYKKSLMQLTSAYSMGLVECTYLVW TPCGGSHLGDRMLSMASAFLYALLTHRVFVVHVTDDMAGLFCEPFPAASWELPAGFLV HNLTQLGRGSEHSYANLLGAKKIKTDDPAGVRSESLPSYAYVHLEHDYQQSDQLFFCD DDQTVLAKVNWLILRSNLYFTPGLFLVPQFEDELRWMFPARDTVFHHIGRYLFHPSNK VWELITRYHTSYMAKFEENIGIQITTFAGSKVSSEEYFKQIVACTSQEKILPEIDPNA TSSANEAALATTASKAVLVSSAQPSEYAEKLKAMYYEHATVTGEPVSVLQPAGAGKQA PNQKALVEMFLQSYCDVSVVSGRSTVGYVGHGLAGVKPWLLLTPTNRTASANPPCIQT TSMEPCFHAPPSYDCRAKKDGDLGAVLRHVRHCEDVGDGLKLYD</aaseq>

Gene Sequence

<dnaseqindica>324..1792#57..246#gtgcaccgaagctgcaaaatctttcacggcggagacgaagtggagggttgattaaaatggacagtaagccgacgcggccgcaccgccggccgccgcctttgccgtccaagacgagcggcgtgtggcccgtcgcgctgctcgtcgtcctctgcttcgccgctctcccgctcttcctcgcgctgtcacgagcgcggccgaccttgtccgacgtgtcgcagatgggcgtcacggtgaccgtccacgacggtgagcagcagcactcaacgttgatcttcctgtgacgtcactacgcgattagttcactggtttcttggtcaatgcagaggatccagcagggacgccgccggaatcctccccggcgaaccgggacaggctcctcggcgggctgctctcgccggacatcggcgagagcgcgtgcctgagccggtacaagtcgtcgctccaccgcaagccgtcgccgcactcgccgtcgccgtacctcgtctcccggctgcgcaagtacgaggcgctccaccgcaagtgcgggcccggcacgctcttctacaagaagtccctgatgcagctcacctccgcctacagcatgggcctcgtcgagtgcacctacctcgtctggacgccgtgcggcggcagccacctcggcgaccgcatgctctccatggcgtccgccttcctctacgcgctcctcacccaccgcgtgttcgtggtgcacgtcaccgacgacatggccggactcttctgcgagcccttcccggccgcatcgtgggagctccccgcgggtttcctcgtccacaacctgacgcagctcggccgcggcagcgagcacagctacgcgaacctgctcggtgctaagaagatcaagaccgacgaccccgccggcgtgcggtccgagtcgctgccgtcgtacgcgtacgtccatctggagcacgactaccagcagtcggaccagctcttcttctgcgacgacgaccagaccgtgctggcgaaggtgaactggctgatactgcgctccaatctctacttcacgccggggctgttcctggtgccgcagttcgaggacgagctccggtggatgttcccggcgagggacacggtgttccaccatatcgggaggtacctgttccacccttccaacaaggtgtgggagctcatcacgaggtaccacacgtcgtacatggccaagtttgaagaaaatattggcattcagatcacgaccttcgccgggagcaaggtgtcgtcggaggagtacttcaagcagatcgtcgcttgcacgagtcaggagaagattctgccggagatcgacccaaacgcgacgtcgagcgctaacgaggcggcgctagccaccacggcgtcgaaggccgtgctcgtcagctcggcgcagccgtcggagtacgccgagaagctgaaggcgatgtactacgagcacgcgacggtgaccggcgagcctgtcagcgtgctgcagccggccggcgccggtaagcaggcacccaaccagaaggcgctggtggagatgttcctccagagctactgcgacgtgtcggtggtcagcgggcggtcgacggttgggtacgtcggccatggcctcgccggggtaaagccctggctgttgctaacgcccacgaatcggacagcgtcggctaacccgccctgcatccagacaacgtcgatggagccgtgcttccatgctccaccgagctatgactgcagggccaagaaggatggggaccttggtgccgttctaaggcatgtcaggcattgcgaggatgtcggtgatggtctaaaattgtatgactagttaattttgatgtacttaatcagatgggtggaaaagacaagcttcaatgatcaattgatcagttgaaagaagaaaaaactgtagaataattacaagatgtattgacttagatggaggcaaatgtaatatggccttccagttgaaagatgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0458100, RefSeq:Os09g0458100