Os09g0462400

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Revision as of 07:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0462400| Description = Patatin family protein| Version = NM_001069937.2 GI:297609597 GeneID:4347298| Length = 2418 bp| Definition = Oryza ...")
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Gene Name

Os09g0462400

Description

Patatin family protein

Version

NM_001069937.2 GI:297609597 GeneID:4347298

Length

2418 bp

Definition

Oryza sativa Japonica Group Os09g0462400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18130442..18132859

Sequence Coding Region

18130442..18130579,18131248..18131429,18131507..18131693,18131964..18132131,18132277..18132579
,18132674..18132859

Expression

GEO Profiles:Os09g0462400

Genome Context

<gbrowseImage1> name=NC_008402:18130442..18132859 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18130442..18132859 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagtgaaaaacatatcatttgtagacatccaccaacttatggcaacctcataacagttctctcgattgatggtggagggattcgaggaatcattccagctgttgttcttacctttctagaatcagagttgcagaaacttgatggagaggaagcccgaatagccgactattttgatgtcattgctgggactagcacaggggggttagtgactgcgatgctggctgcaccaaacaagaaaagaagaccactttttgcagccaaggatattaaagcattttatatgaaccatgctccaaaaatttttccacagctaaggggtccattcggtaggatgatgaggatatttcgatcaatgtcaggaccttcctatgatggcaagcaccttcatgaagttgtaagagagaaattaggaagcaccaggctgcatcagactttaacaaatgtggtcataccaactttcgacatcaagtggttacaaccaaccattttctcttcctacgaggttaagaagaagaacaacaacactatggatgctctgctatcagatatttgcatcagcacgagcgctgctccgacttacctgcctgcgcacttcttcaggactgaagattgtcatggaaacatcaaggaattcaatcttattgatggtggagtagctgccaataatccggctttagttgccattggagaagtaagcaagcagatattcaagaaaaatccagatttcttcccagtaaaaccaatggactacggccgttttttggtcatttcacttggcacgggctccccaaaaattgaagggaaatacaatgcacaaaaagctaaatcatggggagttctggattggttgcttgttggtgggtccactcccttggtagatattttcacacaagcaagtgctgatatggtggatatccacatcgctgctgttttcaaagttttacattctgagcagaactatctgaggattcaggatgatactctcgaagggacactcgcatctgttgatgttgctactagggataatctggagaaacttgctaatgttggagaaatactgctaaacaaacctgtctcacgggcaaatttggagactggccagatgatgcctgcttgtgatgactcagaaattaccaacggggaagctctcaagaggtga</cdnaseq>

Protein Sequence

<aaseq>MESEKHIICRHPPTYGNLITVLSIDGGGIRGIIPAVVLTFLESE LQKLDGEEARIADYFDVIAGTSTGGLVTAMLAAPNKKRRPLFAAKDIKAFYMNHAPKI FPQLRGPFGRMMRIFRSMSGPSYDGKHLHEVVREKLGSTRLHQTLTNVVIPTFDIKWL QPTIFSSYEVKKKNNNTMDALLSDICISTSAAPTYLPAHFFRTEDCHGNIKEFNLIDG GVAANNPALVAIGEVSKQIFKKNPDFFPVKPMDYGRFLVISLGTGSPKIEGKYNAQKA KSWGVLDWLLVGGSTPLVDIFTQASADMVDIHIAAVFKVLHSEQNYLRIQDDTLEGTL ASVDVATRDNLEKLANVGEILLNKPVSRANLETGQMMPACDDSEITNGEALKR</aaseq>

Gene Sequence

<dnaseqindica>1..138#807..988#1066..1252#1523..1690#1836..2138#2233..2418#atggagagtgaaaaacatatcatttgtagacatccaccaacttatggcaacctcataacagttctctcgattgatggtggagggattcgaggaatcattccagctgttgttcttacctttctagaatcagagttgcaggtaaatatttatgttatactatgagttccatttcgtggccaaggcaactctaacttgtcgagagataagttccaaggacaagggaaaactggtgctctagggttaggaaacggcatttgtttggtttgcttgttttaaatttaaaccatttagattcaaacttaattcagtaaccatatctttctataaattaagacatcctttcgtttcgaagtagatcttaattcttaaaaaccttttgcattagtgccagaatgagatttactgatcttttctgccatatgttctgtctttagccatttcttttatgcagatgtaattgttcaacagttgctcaggtttttcagcatttctttctgcatcgaatattccgaattcatttttgatacggctggaacagccataacaattattctgctaattgagaaaatctgattgttatgtcccatctatagatggtgaattgaatgttgtggtaccaccaaaaataaacttggcatgctaaattaaatttcccttttcatttcaatctctgtttgatctacatgctgactctctctctgtagtagcataaccgtgtgtgtgtgcacgaaatgaactgttcagattatacacagttcatgttcttgactgcttctcatgaaatcttttctgtttaatttctcaagaaacttgatggagaggaagcccgaatagccgactattttgatgtcattgctgggactagcacaggggggttagtgactgcgatgctggctgcaccaaacaagaaaagaagaccactttttgcagccaaggatattaaagcattttatatgaaccatgctccaaaaatttttccacagctaaggtgaatacatgtactgcagtttttttttctgatatgattcataacttggctggttgacattttgcttctctctttaggggtccattcggtaggatgatgaggatatttcgatcaatgtcaggaccttcctatgatggcaagcaccttcatgaagttgtaagagagaaattaggaagcaccaggctgcatcagactttaacaaatgtggtcataccaactttcgacatcaagtggttacaaccaaccattttctcttcctacgaggtatccctctttcccttcatccttctccctttaaagtctctcaagagtattttgtgtgttgttttggacacaagtgtctacaattcgtaataaaattcaatcaattcaattttaagggcacaagaacatgtattatacacaagtacttatttctctattttgctatgaaaataattcataggaattatttatgagccagtaataagaactcccatcaatacaacaatgatggagactacacaacatgaaccttatgctctcatatcataggttaagaagaagaacaacaacactatggatgctctgctatcagatatttgcatcagcacgagcgctgctccgacttacctgcctgcgcacttcttcaggactgaagattgtcatggaaacatcaaggaattcaatcttattgatggtggagtagctgccaataatccggtacgatgtctctgtagttgtgaacaactcattaccattgaagtgcactctgtgatgttgaaaatggtttggcaagtttacccagttcatatattgaagcgatgttttttccccaaaaggccctgaatatgtctatcttgtttaggctttagttgccattggagaagtaagcaagcagatattcaagaaaaatccagatttcttcccagtaaaaccaatggactacggccgttttttggtcatttcacttggcacgggctccccaaaaattgaagggaaatacaatgcacaaaaagctaaatcatggggagttctggattggttgcttgttggtgggtccactcccttggtagatattttcacacaagcaagtgctgatatggtggatatccacatcgctgctgttttcaaagttttacattctgagcagaactatctgaggattcaggtaagaaagagatagacagtttatttttttttatcaagtaatagccaacaaacatgattcctaatataaaaaaaatgccactttggaataacaggatgatactctcgaagggacactcgcatctgttgatgttgctactagggataatctggagaaacttgctaatgttggagaaatactgctaaacaaacctgtctcacgggcaaatttggagactggccagatgatgcctgcttgtgatgactcagaaattaccaacggggaagctctcaagaggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0462400, RefSeq:Os09g0462400